Sarcophilus harrisii (Tasmanian devil): 100921023
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Entry
100921023 CDS
T02286
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360
Axon guidance
shr04514
Cell adhesion molecule (CAM) interaction
shr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100921023 (L1CAM)
04517 IgSF CAM signaling
100921023 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100921023 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100921023 (L1CAM)
04090 CD molecules [BR:
shr04090
]
100921023 (L1CAM)
04091 Lectins [BR:
shr04091
]
100921023 (L1CAM)
Cell adhesion molecules [BR:
shr04515
]
Immunoglobulin superfamily
L1 family
100921023 (L1CAM)
CD molecules [BR:
shr04090
]
Proteins
100921023 (L1CAM)
Lectins [BR:
shr04091
]
I-type lectins (Siglecs)
100921023 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Ig_PDGFR_d4
Pur_ac_phosph_N
Izumo-Ig
Ig_5
C1-set
V-set_CD47
Ig_6
fn3_2
Ig_VEGFR-1-like_5th
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
100921023
NCBI-ProteinID:
XP_031801051
Ensembl:
ENSSHAG00000003280
UniProt:
A0A7N4PHL5
LinkDB
All DBs
Position
X:12821736..12869717
Genome browser
AA seq
1261 aa
AA seq
DB search
MAVVLSFLWTLLLWSLGLCIQIPKEYHKHMMQPPNITEQSPERLVVFPTDEISLKCEASG
KPEVQFRWTKENIHFSPEKEPGVITHMNSGSFTITGNNSNFAHHYQGTYRCFASNRLGTA
MSHEIQLVAEGAPKWPKEKVQPFEVEEGQSVVLPCNPPASVVQPRIYWMNSRIFHIAQDE
RVTMGQNGNLYFANVLTNDSHSDYICHAHFLGARTIMQKEPIDLRVKPTNNMIYRRPRLL
LPEGLTSRLVALRGQPLVLECIAEGFPTPTIKWSYPSNQMQAGRVTYQNFNKTLRLVRVE
EEDDGEYRCWAENTLGMAQHVYYVTVEAAPYWLQEPESLVLAPGETARLNCQVQGRPRPM
VTWRINGISLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEARNKHGLLLANAYIFVVQ
LPTKILTPDSKTYREVQGSTAYLLCNAFGVPMPRIQWLTRDRATVLQDERFVPFANGSLA
IRDLRINDTGSYFCEADNDQNTVAIQAHLQVKEATQIKKGPQNQIVKKGSNVNFMCQVSF
DPSLEIQINWYWNDQNIKDIFSDDKYILKEEELTIKNLDYSDQGNYSCVVKTALDSVEKK
AALLVVGSPGPVGQVELYKQKDFQVQLSWSPAEEHNSPIEKYNIYFEDRTLDPGFWHQLA
TVPGNETSTKLKLSPFIHYNFRVVASNKYGTSDPSPDSELFVTPKSVPEKNPSDVKGEGN
ETNNMVITWMPLKWMDWNGMELKYRVQWRQKNESEWQEVMARAPSFVVSNTPTFVPYEIK
VQAVNEVGKGPDPQIVIGYSGEDVPQAIPIIDIESLNATSVKIKWGPVDLNKVRGHLRGY
KVTYWWVNSRWSRSKRHSSKMSIERPASATEAVLSDLRPYSIYNVQVQVFNGRGLGPPSE
TRQFHTEEGVPDRPQSLHLRRLSDTALQLSWKPPLNPNGELKGYQLFYEAINQETEEKEK
KNQTLHPTILMLNLSGLSPQALYHFQLRATTSVGPGEMITQEGSTILKSGIPTFGNISAV
TSENASTIYWSPEEGQHDVTFKIWFKSIEGKKLIQPQHVNYSQKFYIQENLEPDTQYTIC
FFGYNYTDEMVLFREMEVKTGGTDRVKLTPGNFATKSWFIVFISAIILLLLILLILCFIK
RSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESFSILKYSDNEEKGFGSSQPSLNG
DIKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPTTVTL
E
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtcctgagctttttgtggacactccttctgtggagcctcggcctgtgcatc
cagattccgaaagaataccacaaacacatgatgcagccccctaacatcacagagcagtcc
ccggagcggctggttgtcttccccactgatgagatcagcctgaagtgtgaggccagtggc
aaacctgaagtccagttccgctggactaaggaaaacatccacttctctcctgagaaggag
cctggtgtgatcacacatatgaactctggttccttcaccattactggcaacaacagcaac
tttgcccatcactaccagggcacctaccgatgctttgccagcaacagactgggcacggct
atgtcccatgagatccagcttgtggctgagggcgcccccaagtggcccaaggagaaggtg
cagcccttcgaggtggaggaaggtcagtccgtggtcctgccctgtaatcctccagccagc
gttgtgcaaccccgaatctactggatgaacagcaggatcttccacatcgcacaggatgaa
cgagtgaccatgggccaaaacggaaacctttactttgccaatgtactcaccaatgacagc
cactcggactacatctgccacgcccacttcctgggggccagaactatcatgcagaaggag
cccattgacctcagggtcaaacccactaacaatatgatttaccgccggccacgcttgctc
ctgcctgaaggtttgaccagccgtctggtggcattgcggggccagcctctggttttagag
tgtatcgctgagggcttccccacacccactataaagtggtcctacccaagcaaccagatg
caggcaggccgagtgacctaccagaacttcaataagacactgcgtctggtgagggtggag
gaggaggacgatggggagtaccgctgttgggctgagaacaccctggggatggcgcaacat
gtctactatgtcactgttgaggccgccccatactggttgcaggagcctgaaagcctggtt
ttggcaccaggggagactgctcgactcaactgccaagtccagggcaggccccgccccatg
gttacttggaggatcaatgggatctcgctggaaaatctgaccagggatgacaaactcaga
gtacaaggaggagcattgatcctgagtaacgtgcagccaaatgacaccatggtgactcag
tgcgaggccagaaacaagcacgggctcttgcttgccaatgcctacatctttgttgttcag
ctgcccaccaagatcctgactccagacagtaagacttaccgggaggttcaaggtagcacc
gcctacctgctgtgtaatgcctttggggtgcccatgcccagaatccaatggctaactcgg
gatcgagccacagtcttgcaggatgaacgctttgtcccctttgccaatggttctttggcc
atccgggaccttcggattaatgatacgggatcctatttttgtgaggctgacaacgatcaa
aacacggttgctatccaggctcatcttcaggtcaaagaggccacccagatcaagaagggt
ccccagaaccagattgtcaagaaaggctcgaatgtgaactttatgtgccaggtgtctttt
gacccctccctggaaattcaaatcaattggtactggaatgatcaaaacatcaaggacatc
ttcagtgatgacaagtacatcctaaaggaagaggagttgaccattaaaaatttggactat
tctgaccagggtaactacagttgtgtggtcaagactgccttggactcagtagagaaaaag
gctgcactcctggtggtggggagccctgggcctgtgggccaggtagagctgtataaacag
aaggattttcaagtccagctgtcctggagcccagcagaggaacataactcacccattgag
aagtacaacatttattttgaggaccgaaccttagaccctgggttctggcaccaactggcc
acagtgcctgggaatgagacctcaaccaagctcaagctgtctccctttatccattacaac
ttccgtgttgtagccagcaacaagtatggtaccagcgatccaagtcctgactcggagctc
tttgtcacccccaaatcagtaccagagaagaacccttcagatgtcaagggggaagggaac
gagaccaacaatatggtcattacttggatgcctctaaaatggatggattggaatgggatg
gaattgaagtatcgcgtgcagtggcgtcaaaaaaatgagtcagagtggcaggaggttatg
gcgagagcccccagttttgtggtgtctaacacacccacctttgtgccctatgagatcaag
gtccaggcggtcaatgaggtggggaagggacctgaccctcaaattgtcattggctactct
ggtgaggatgttccccaggccattcctataatagatattgagtcattgaatgcaacttca
gtgaaaatcaagtgggggcctgtggatctgaacaaagtcagagggcatcttcgtggatat
aaggtgacgtactggtgggtgaatagccgctggagtaggagcaagagacacagctccaaa
atgtccatcgagaggcccgccagcgccacagaagctgtcctttcagacttgcggccctat
agcatctataacgtacaggtgcaagtgttcaatggtcggggcctgggtccacccagcgag
actaggcaattccatactgaagagggagtaccagaccgcccacagtcactgcatctgcga
cgcctgtctgacacagccctacaactctcctggaaacctcctctcaacccaaatggggag
ctcaaaggctatcagcttttttacgaggccattaatcaggagacagaagagaaagagaaa
aagaaccagaccctgcatcccaccatactgatgctcaacctgagcggcctcagcccccag
gctctgtaccacttccagcttcgagccaccaccagcgtgggccctggtgaaatgatcacc
caagaaggaagcaccatactcaagtcagggatcccaacttttggaaacatctcggctgtg
accagtgagaatgcaagcactatttattggtctccagaggagggacagcatgacgtcaca
ttcaagatatggttcaaatctatagaaggtaagaagcttatccagccccagcatgtcaat
tacagtcagaaattctacattcaggagaacctcgagcctgacactcagtacaccatctgc
ttctttggctacaactacacagatgagatggtgcttttcagggagatggaggtgaaaacc
ggtggcacagatcgagtgaagctgacgcccgggaactttgccaccaagagctggtttatt
gtctttataagtgccatcatccttctccttctcatccttctgattctttgctttatcaag
cgcagcaagggcggcaaatactcagtcaaggataaggaagacacgcaggtggactctgag
gccaggccgatgaaagatgagacatttggcgagtacaggtccctggagagcttctctatc
cttaaatatagcgacaacgaagagaaaggcttcgggagcagccagccttccttgaatgga
gacatcaagcccctgggcagtgacgacagcctggccgactacggcggcagcgtggacgtt
cagttcaacgaggacggctccttcatcggccagtacagcggcaagaaggagaaggaggcc
gccggaggcaatgacagctctggggccacttctcccatcaaccccaccactgtgaccctg
gagtag
DBGET
integrated database retrieval system
