Sarcophilus harrisii (Tasmanian devil): 100921113 Help Entry 100921113         CDS       T02286                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism shr  Sarcophilus harrisii (Tasmanian devil) Brite KEGG Orthology (KO) [BR:shr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:shr03009]     100921113 (PDCD11) Ribosome biogenesis [BR:shr03009]  Eukaryotic type   90S particles    Other 90S particles     100921113 (PDCD11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1_RRP5 S1 OB_RRP5_4th Spt6_S1 HAT_PRP39_N HAT_Syf1_CNRKL1_N Suf HAT_PRP39_C OB_RRP5 TPR_14 HAT_Syf1_CNRKL1_C ARM_TT21_N TPR_16 UTP6_C TPR_19 ARM_TT21 TPR_12 DUF2110 TPR_2 TPR_8 TPR_1 TPR_7 Motif Other DBs NCBI-GeneID:  100921113 NCBI-ProteinID:  XP_012397044 Ensembl:  ENSSHAG00000018258 LinkDB All DBs Position 2:559356564..559394296 Genome browser AA seq 1863 aa AA seqDB search MASQEDSFPRGGSKKKAHPEKTPQQPIEHDNLFDVPTEEGSRKRKRNQEQGAKNKKSKAE KKESSRPEAEACGILSIEALTEGMRLLGCVKEINNLELVISLPNGLWGYVQATNISDAYT KKLSEQLDQEEPLEDLAPLSELFPPGLLVRCVVSSITSASKKKSVKLSLNPKDVNRVLSP ASLKPGMLLTGTVHSVEDHGYLVDIGVMGTKAFLPWQKEQEYVKQKNKGTKLRVGQYLNC LIEEVKGNGGSVLLSTIQSVVSAAIATEEQNWTLDNLLPGLVVKAQVQKVTPHGLTLSFF SSFTGLVDFMHLDSKKAGHYFQTQMVRACILSVHPRTKCVRLTLRSSFLQAGRPITRLCH NLIGAVLNDVPVQGFFAKAGATFRLKDGSLAYARIMHLSQTEKSFKPEKFKPGNMHKCRV IDYSPMDDLALLSLKTSIIEAPFLRYHDLHPGQVVKAKVFALRSYGMIVKVTEQIKGLVP TLHLADVQIRNPQKKYRLQDEVKCRVLTCDPENKKLLMTLKKTLVESNLPALTSYKQAKP ELQTHGFISSIKDSGCVVKFYNDVRGLVPQRELGAQPISTPGEVFYVGQVVKVTVLNSEP EQERMLLSFRLLSDKETEGPAQSQKKATIKVGQLVDVKVKKKTEKGLEVSILPNNIRALL PTTHLSDSVNNSQLLYSWLRAGDVLHRVLCLSHSDGHIILCRKPALISAVESGQDPKVFS EFQPGMLLTGFVKTIKAYGVFVQFPSGLSGLAPKSALSDKFVTTVSDHFVEGQTVVAKVT NVYEEKERMLLSLRLSDVCQEDTAVSSLALLSQWLEELQGVRSLMSSRDSMLTQTLAEIT PGLLMDLVVQDMSSDGSLMFSSGSVPGLVLKASRYHQGGKVMDPGQRTKAVVLHVDTLKS EVHVSLRQELVNRKSKQLKKNTEHRAVIEHLEKTFAIGSLMETGQLVAFPVTSHLNDTFR FDSEKLQVGQRVSLIIKSAKPSDIGLFLAVESSVKKRTPALPLADPEPAGEEPGVMSSLL EKPTLPIGEMVTGTVKSVKATHVVVTLENGLVGCIHASQILDDVPLGTQPTAKLKVGKPV TARVIGQRTLLTHKTLPISHPSSAQTVSELSIRSSELEKDISIDPSTHCSSPTEKLKQYL PGQTVICFMRKFNVIKKWLEVEITPDIRGRIPQLLTSLSFKVLKHPEKKFKIGQALSATV VGPESSKGFLTLSLIGPHRLEEGEVAMGRVVKVIPKEGLQVLFPFGTIGKVSIFHLSDSY LEAPLEGFHPEKIVRCCVLSTKDPVLTLSLRQSRTNPRMKNKIEDPEVNSIKNIKEGQHL RGYVEAVKKLGVHFRIGPTLVGRVKYRHVTKYFLSDKTLYRTYLPEGKLLSAKVLRLNRK QKLVYLSFLPKDTGKPDVFPDSLGLPLRDQGKNRVKEVPSSQPKKKRKLEGKEEEDKGDS STKQEEEKQQESEAKARRAEKAANTGKRKMPEMEREQEKVTKKKRPNLLPEEDDSGVEVN YNEEKRLKQPKQKQTKPTEIPRLQLSSGFVWDVSLDMLAPAAPPREESSDSEEESSSQAT LKKKSKKDKELEKQQAEKELTRIETALMDPNWQPETADDFDRLVLSSPNSSILWLRYMAF HLHATEIEKARAVAERALKSISFREEQEKLNVWVALMNLENMYGSKETLSKVFERAVQYC EPLKVFFQLADIYSKSEKYQAAEEVYNQMLKRFRQEKTVWVKYGSFLLQRGKAEACHDLL PRAFSCLPQKEHVDVISKFAQLEFYQGDGERGKAMFESTLNSYPKRTDVWSIYIDMLIKF GSQKEVRDAFERVVHLSLSPKRMKFFFKRYLDYEKQHGTAETVQAVKEKALNYVESRNTL ADS NT seq 5592 nt NT seq  +upstreamnt  +downstreamnt atggcatcccaggaagacagcttccctcgagggggttcgaaaaagaaagctcatccagaa aaaactccccagcagccaattgaacatgataatttatttgatgttcctactgaggaagga tcccgaaaaaggaaaaggaaccaagaacaaggggctaaaaataaaaagtcaaaggcagaa aaaaaggagtccagcagacctgaagcagaggcatgtggaatcctcagcattgaggctcta actgagggaatgcggctcctgggatgtgtgaaagagataaataatctggagcttgtgatc agtctgcctaatggcctctggggatatgtgcaagcaaccaatatctctgatgcctatacc aagaaactgagtgaacagttggatcaggaggagcccctggaggacctggctcccttgtct gagttattcccgccaggattgctggtgcgctgtgttgtcagcagcatcacatctgcgtca aagaagaaaagtgtgaagctgtccctgaaccccaaggatgtcaacagggtgcttagccct gcgtccctgaaaccaggcatgctgctcacaggcacagtacacagtgtggaagaccatggt tacctggtggacattggcgtgatggggaccaaagccttcctgccttggcagaaagagcag gagtatgtcaaacagaagaacaaaggtactaagctgcgtgtgggccagtatctgaactgc ctcattgaagaagtaaaaggcaatggggggagtgtccttctgtccactatacagtctgtg gtttctgcggccattgctacagaggaacaaaactggacgttggataacctattaccagga ctggtggttaaagctcaagtgcagaaggtgactcctcatggtctcaccctgagtttcttc tcttccttcactggactggttgattttatgcacttggattctaaaaaggcaggacattac ttccaaacccaaatggtgagggcctgtatcctctcagttcatccacgtaccaagtgtgtc cgactaacattgcgctcttccttcctgcaagctggccgcccaatcactcgcctctgccac aatctcattggagccgtgttgaatgatgtgcctgtccagggcttctttgcaaaggctggt gccaccttcagactgaaggatggatctctggcctatgctaggatcatgcacctctcccag actgagaagtcctttaagccagagaagttcaagcctggcaatatgcacaagtgtcgggtt attgactacagcccaatggatgacctggcgttgttgtctctgaaaacgagcatcatcgaa gctccattcctgagatatcatgacctccacccagggcaggtagtcaaggccaaggtgttt gcgctgagatcctatgggatgattgtgaaggtgacggagcaaatcaaaggccttgtgccg accttgcacttggctgatgtccagatccggaatcctcagaagaagtatcgtctccaagat gaggtcaagtgccgggttctgacatgtgaccctgagaacaagaaactactaatgactctg aaaaagaccctggtagaatccaacctcccagctctcacgagctacaagcaagccaagccc gagctgcagacgcacggcttcatcagcagcatcaaggactcgggctgtgtcgtcaagttc tataacgatgtgaggggactggtaccgcagagggagcttggggcccagccgatctccacc ccaggggaggtgttctacgtgggacaggtagtgaaggtcacagtgctgaacagtgaaccg gagcaggagaggatgctcttgtccttcaggctgttaagtgacaaagagacagaaggccca gcccagagtcagaagaaagctacgatcaaggttggacagttagtagatgtgaaggtgaag aagaagactgagaagggattggaggtatccatcctacccaacaatatccgtgccttgctt cccacaacacatctatcagacagtgtcaacaacagtcagctgctctactcctggctccgg gcaggtgacgtcctccacagggtcttgtgtttgagccatagtgatggtcacattatcttg tgcaggaaaccagccctgatctctgctgtggagagtggccaggatcccaaggtcttttct gaattccagcctgggatgctgctgactggttttgtgaaaactatcaaggcctacggcgtc ttcgtccagtttccatcgggccttagtggactggctcccaagtctgccctgagcgacaag tttgtgaccacagtcagcgaccactttgtggaagggcagacagtggttgcaaaggtgacc aacgtgtatgaggagaaagagcggatgctgctctcgctgcgcctgtccgatgtttgccag gaagacacagctgtcagctccctggccctcctgagccagtggttggaggagctgcaaggg gtccgaagcctcatgagcagccgagactctatgctgactcaaacactggctgaaattacc ccggggctgctcatggatcttgtggtgcaagacatgtcaagtgatggctctctgatgttc agcagtggctcggtgcctggcctggtgttgaaggccagcagatatcaccagggagggaaa gtgatggatcctgggcaaagaacaaaagctgttgtccttcatgttgatacgctgaagtct gaggttcatgtttcccttcgccaggaactagtgaacagaaaatccaagcagctgaagaaa aacactgagcaccgagcagttatagaacacttggaaaagacatttgccataggctccttg atggagactggacagcttgtagcttttccagtgacctctcacctcaatgacaccttccgt tttgactcagagaagctgcaggttggtcagagggtctccttgatcatcaagagcgcaaaa cccagtgacataggcctcttcttagctgtggagagttcggtcaaaaagaggacgccggct ctgcccttggcagatccagagcctgcaggggaagagccaggagtgatgagctcgcttcta gagaaacccaccctgcccattggggaaatggtcactggaactgtgaagtctgtcaaggct acccatgtggtggtgaccctcgagaacggtctggttggctgtatccacgcctcccagata ttggatgatgtgcctcttggcacccagcccactgccaagcttaaagttgggaagccagtc actgctcgagtgattggccagagaactttattaactcacaagactctcccaatcagccat ccatcaagtgcacagactgtctctgagctgagtattcgatcaagtgagctggagaaggac atcagcattgaccccagcactcattgctctagccccacagagaagctcaaacaatacctt cctggccagacggtgatctgttttatgagaaagttcaatgtgatcaaaaaatggcttgag gtggagataactcctgatatccggggaagaatccctcagctattgacttctctcagtttc aaggttctgaagcatccagagaagaaattcaagattggccaagccctgagtgctactgta gttggcccggagtcctccaagggattccttactttgtctctcataggtcctcacaggttg gaagaaggagaagtagccatgggccgtgtagtgaaagtgatccccaaggaggggctgcaa gtcctcttcccctttgggacaattgggaaagttagcatctttcacctgagtgactcttac cttgaagcgcccctggaaggcttccaccccgagaaaatcgtccggtgttgtgtgctctcc accaaagaccccgtgctgactctgtcactgagacagtccaggacaaaccccaggatgaaa aacaaaatagaagaccctgaagtgaattcaatcaagaacattaaagaagggcagcattta cggggctacgtggaggctgtcaagaagctaggggtacactttcgcattggccccacactt gtgggtcgggtcaagtaccggcatgttaccaagtacttcttgtctgacaaaactttgtac cgaacttacctcccagaaggaaagctgctttccgccaaggtcttgaggctgaaccggaag cagaaactggtgtacctgtccttcctccccaaagacacgggcaagcccgatgtatttcct gactctttgggcctgccactgagggaccagggcaagaaccgggtcaaggaggtgcccagc agccagcccaagaagaagcggaaactggaaggcaaggaggaggaagacaagggagactct agcacaaaacaggaggaggagaagcagcaggagtcggaggccaaggccagacgggcagag aaggcagcaaacacagggaagcggaagatgcctgagatggaaagagaacaggagaaagtg accaagaagaaaaggccaaaccttctgcctgaagaagatgatagtggagtggaagttaac tataatgaggagaagaggctgaaacagcccaagcagaagcagaccaagcccacagaaatt cccaggctgcagctgtcttcgggcttcgtgtgggatgtgagtctggacatgcttgccccc gccgcgccgcctcgggaggagagttcggacagtgaagaggagtcatcaagccaagccacg ctgaagaagaaaagcaagaaggacaaggagctggagaagcagcaggcagagaaggagctg acacgcatcgagacagccttgatggaccccaattggcagcccgagaccgctgatgacttt gaccgtctggtcctgagctcccccaacagctccatcctgtggctgcggtacatggccttc cacctgcatgccacagagatcgagaaagcccgggcggtggctgagagggccctcaagtcc atctccttcagagaagagcaggagaagctaaatgtgtgggtggccctgatgaacctagag aatatgtacggctccaaagagacgctgagcaaggtctttgagcgggctgtgcagtactgt gagcccttgaaggtcttcttccagctggctgacatctacagcaagtcagagaagtaccag gctgctgaagaagtctacaatcagatgctgaaacgtttccgacaagagaagactgtgtgg gtcaagtatggctccttcctccttcagaggggaaaggctgaggcctgtcacgacctgctg ccgcgggccttcagttgtctgccacagaaagaacatgtggatgtcatctctaagtttgcc cagcttgagttctatcagggagatggcgaacgaggcaaggccatgtttgagagcaccttg aatagctaccccaagcgcacagacgtctggtccatctacatcgacatgctcatcaagttt gggagccagaaggaagtaagggacgcctttgagcgagtggtacacttgagtctgtccccc aagcggatgaaattcttcttcaaacgctacctggactatgagaagcagcatggcacagct gagacggtgcaggctgtcaaggagaaggccttgaactacgtagagtccaggaacactctt gctgacagctaa

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