Sarcophilus harrisii (Tasmanian devil): 100921120
Help
Entry
100921120 CDS
T02286
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100921120
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100921120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF5527
Motif
Other DBs
NCBI-GeneID:
100921120
NCBI-ProteinID:
XP_031809282
LinkDB
All DBs
Position
2:373988411..373992905
Genome browser
AA seq
772 aa
AA seq
DB search
MKPKRQVICFVILLWVCEAASATGRFSVAEEIEVGSFVANVAKTLGLEIGELSARGARVL
SEDNRHYLQLNLESGDLLLKEKLDREQLCGPEEPCLLSFQILLEKPFQIVRAELRVQDIN
DHSPVFPNDEMLLNVPENSPPGSLFPLKTAQDLDIGSNSVQNYTISLNSYFHVQTHARGD
GRKFAELVLEKTLDREVQPEVTLTLTALDGGSPPRSGTAQIRVLVVDINDNAPIFPQAQY
EVQIPENSPIGSLVVTVSATDLDTGNNGQVSYSFFQGSEEIVNTFEVNPTLGEIKMRREL
DFEAIKSYEVDIEATDGGGLSGKCTVVIQVTDVNDNAPELVISSFTSPIPENSPETVVAV
FKIRDQDSGENGQMVCSIEGNVPFFLKPSIDNFYTLLTQSSLDRESRVEYNITITVTDLG
IPRLKTECNITVLISDINDNPPEFTQSAYTFYLQENNIPALHIGSVKASDRDSGTNAKVT
YSFQSPKAGDLPLFSYVSINSDNGNLYVLRSLDYEVIQDFQFTVRATDGGTPPLSSQALV
QVVVLDKNDNSPFVLYPPQNGTVPCNDLVPRTAEPGYLVTKVVGVDMDSGQNSWLSYQLL
KATDPGLFTLWAHNGEIRTARPISDKDAIKQKLLVLVKDNGEPPLSTVASLNVLLVDGFS
EPYLQLSDAPKEQVQIDSLTVYLIISLALISFLFLVSIIMFIAICLWKRKRDATDCSQFD
PNNPFPNHLLDVSRTGTLSQNYQYEVCLTSGSGTDEFKFLKPILPSVPPQAT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctaaaaggcaagtgatatgttttgttatcttattgtgggtttgtgaggcggcc
tcagcaaccgggaggttttctgtggcggaggaaatcgaggtgggctcctttgtggccaat
gtggcaaagactttggggctggagataggagaattgtcggcccgcggggcccgagtcctc
tctgaggacaatcggcattatttacagcttaacctagaaagtggggatctgctcctgaag
gaaaaattagaccgggagcagctgtgtggtccggaggagccgtgtctgctgtcttttcag
attttactggaaaaaccctttcagatagttcgcgctgagctccgggtccaagatataaat
gaccattcgcctgttttccccaacgatgaaatgcttctcaatgtccctgaaaatagtcca
cccgggtctctgtttcctctgaaaaccgcgcaagatttggacatagggagcaatagtgtt
cagaactacacaatcagtcttaattcttatttccacgttcaaacccatgctcgcggtgac
ggcaggaagttcgcggagttggtgttggagaaaaccctggatagggaggtgcagcccgaa
gtcactctaactcttaccgcattggatggtggatccccgcctcggtctggaacagctcaa
atccgagtcctggttgtagatatcaacgacaatgcccccatttttccccaggctcagtat
gaggttcagatcccggagaatagccccatcggctccctggtagtcacagtctctgctaca
gatttggacacagggaataatgggcaagtatcatattcatttttccaaggctccgaagaa
attgtaaatacttttgaagtaaatcccactttaggagaaattaaaatgagaagagaacta
gactttgaggcaattaaatcttacgaggtggatattgaagccacagatggtggggggctt
tcaggaaaatgcactgttgtgatccaagtgacagatgtgaatgacaatgccccagaacta
gtcatatcgtcatttaccagtcctatccctgagaattcacctgagaccgtggtggctgtt
tttaagattcgagatcaagattcgggagaaaacggacaaatggtttgttctattgaggga
aatgtccctttcttcttaaaaccatctattgacaacttttacaccctgttaacacagagc
tccttggatagagaaagtagggtcgagtacaacatcaccattacagtcacggatctggga
attccgaggctcaaaactgagtgcaacatcactgtgctaatttctgacatcaatgacaat
cctccagagtttactcagtcagcctacaccttctacctccaggagaataatattcctgcc
ctccatattggcagtgtgaaggccagtgacagggattcagggaccaatgctaaggttact
tattcttttcagtctcctaaagctggagacctgcccctcttctcctatgtctccattaac
tctgacaatggcaatctctatgtcctgagatccctggattatgaagtcatccaagatttc
caattcactgtaagggcaactgatggaggcaccccacccctgagcagccaagccctagtt
caggttgtggtcctagataagaatgataactctccttttgtgctatatcccccacagaat
ggcacagttccctgcaatgatctagtgcccagaactgcagaaccaggttacctggtcacc
aaagtggtgggtgtagatatggattcagggcaaaattcttggctttcctaccagctgctc
aaggccacagaccccggtctcttcactttatgggcccacaatggggaaattcgcacagca
aggcccatcagtgacaaagatgccattaagcagaagcttctggtgctggtgaaggacaat
ggggagccacctctgtccactgtggcctcattgaatgtactattggtggacggcttctct
gagccctacctgcaactctcagatgcacccaaggaacaagtccagattgattccctcacc
gtttacttgatcatttctttagctctcatctcctttctttttctggtctctattattatg
tttattgctatttgcctgtggaagaggaaaagagatgccacagattgtagtcaatttgat
ccaaataaccccttcccaaaccatcttttggatgtcagcagaacagggaccttgtcccag
aactaccaatatgaggtgtgtctcaccagtggttcagggacagatgagttcaagttcctg
aagcctattctacccagcgttcctcctcaagctacttag
DBGET
integrated database retrieval system
