Sarcophilus harrisii (Tasmanian devil): 100921154
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Entry
100921154 CDS
T02286
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100921154 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100921154 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
shr03019
]
100921154 (SUPT5H)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100921154 (SUPT5H)
RNA polymerase I system
100921154 (SUPT5H)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100921154 (SUPT5H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
KOW6_SPT5
Spt5-NGN
KOWx_SPT5
Spt5_N
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
100921154
NCBI-ProteinID:
XP_031818975
Ensembl:
ENSSHAG00000009504
UniProt:
A0A7N4NVD3
LinkDB
All DBs
Position
3:complement(589267751..589279927)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSDSDDSNFSEEEEEDSERSSEEAEEVEQVEEERRSVAGSEKEEEPEEEEEEEEEEEYDE
EEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLD
EDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKD
PNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVK
QAIEGVGNLRLGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYV
EPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDG
DFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKER
EHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGD
HVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEW
GELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHV
KDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN
FTVGGFAPMSPRISSPMHPSAGGQRGGFGSAGGGGMSRGRGRRDNDLIGQTVRISQGPYK
GYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMY
VQGSRTPMYSSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEY
AFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNAQYNPQTPGTPAMYNTDQFSPYAAPSP
QGSYQPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKSNKVKVILGEDREATGDLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagtgatgacagcaacttctccgaggaggaggaggaggacagtgagcggagc
agcgaggaggcggaggaggtggagcaggtagaggaggagcgacggagtgtggcaggcagt
gaaaaggaggaggagcctgaggaggaggaggaagaggaagaagaggaggagtatgatgaa
gaggaggaggaagaagatgatgaccgtccccctaaaaagccaagacatgggggtttcatc
ctggatgaagctgatgtggatgatgaatatgaagatgaagaccagtgggaagatggagcg
gaggacattctagagaaagaagagattgaagcatccaacattgacaatgtcgttctggac
gaggaccgctctggggcccggcgccttcagaatctctggagggaccagcgagaggaggaa
ctgggcgagtattacatgaagaaatatgctaaatcatctgtgggagaaactgtgtatgga
ggatcggatgaactctcagatgacatcactcaacagcagctgctgcctggggtcaaggac
cccaatttgtggactgtgaaatgtaagattggggaggaacgagccacggcgattgccctc
atgagaaagttcattgcctaccagttcacagacacaccattgcagatcaagtcagtggtg
gctccagaacatgtcaagggttacatctatgtggaagcctataagcagacgcacgtgaag
caggccatcgagggggtgggcaacctgcgcctgggctactggaaccagcagatggtgccc
atcaaggaaatgacggacgtgctcaaggtggtcaaggaggtcaccaacctcaaacccaag
tcctgggtccgcctcaagaggggcatctacaaagacgacatcgcccaggtggattacgta
gagcccagccagaataccatctccctcaagatgattcctcgcattgactatgatcgcatc
aaagcccgaatgagtctgaaagactggtttgccaagaggaagaagttcaagagaccccca
cagcgattgtttgatgctgaaaaaatacgttccttgggaggagacgtggcttctgatgga
gattttctgatctttgaggggaaccgctacagtcgaaaaggcttcttgttcaaaagcttc
gcgatgtcagcagtgatcacagagggtgtgaagcccacgctgtcagagctggaaaagttt
gaggaccagccagagggaattgacctggaggtggtgactgagagcacagggaaggaacga
gagcacaacttccagcccggggacaacgtggaggtgtgcgaaggtgagctgatcaacctc
cagggcaagatcctgagtgtggacggtaacaagatcaccatcatgcccaagcacgaggac
ctgaaggatatgctcgagttcccagcccaggagctgcggaaatacttcaagatgggggac
cacgtgaaagtgattgctgggagattcgagggcgacacgggcctcattgtgcgtgttgag
gagaactttgtgatcctcttctctgacctcaccatgcacgagctgaaagtgcttcccagg
gacctgcagctctgttctgagacggcctcaggcgtggatgtggggggccagcacgagtgg
ggcgagctggtgcagctggatccccagaccgtgggagtcatcgttcggctggagcgggag
actttccaggtcctaaacatgtatggaaaagtggtgacggtgcggcaccaggcagtgact
cgcaagaaggacaaccgcttcgccgtggccttggactcggagcagaataacatccacgtc
aaagacatcgtgaaggtcatcgacggcccccattcgggcagagaaggagagatcaggcat
ctgttccggggatttgcatttctccactgcaagaagctggtggaaaacggtggcatgttc
gtctgcaagacccgccacttggtgttggcaggaggctccaagcctagagatgtcaccaac
ttcaccgtggggggctttgctccgatgagccctcggatcagcagtcctatgcaccctagt
gctggaggtcagcggggaggatttggcagcgccggcggtggggggatgagccgtggccgt
ggccggagagataacgacctgataggacagactgtgcgcatctctcaggggccttataaa
ggctacattggggtggtgaaggacgccaccgagtctacagcccgagtagagcttcactcg
acctgccagaccatctctgtggatcgccagcggctcaccactgttggctccaggcgtcca
gggggcatgacttccgcctatggacggaccccgatgtatggctctcagacacccatgtat
gtccaaggctcccggacccccatgtacagttcacagacccctctgcatgatggcagccgc
actccgcattacggttcccagacaccccttcacgatggcagccgcacgccagcccagagc
ggtgcttgggaccccaacaaccccaacacgccatccagggcagaggaagagtatgagtat
gcctttgatgatgagcccacgccatccccccaggcctatggtgggacccccaacccacag
acaccaggctatccagacccctcatccccacaggtcaatgcgcagtataacccccagact
cctggaacccccgccatgtacaacacagaccagttctcaccctatgcagctccctcacca
caaggctcctaccagcccagcccccagagttaccatcaggtggcaccgagtcctgctggc
taccagaacacccactcaccggccagctaccaccccacaccctcgcccatggcgtaccag
gctagtcctagccctagtccagtgggctacagtccgatgacccctggggctccatcccct
ggtggctacaaccctcacacaccaggctctggtattgagcagaactccagtgactgggtg
accacagacatccaggtgaaggtccgagacacctacttggacagccaggtggtgggacag
acgggcgtcatccgcagcgtcacgggtggcatgtgctccgtgtatttgaaagacagtgag
aaggtggtcagcatctctagtgaacacctggagcccatcactcctaccaagagcaacaag
gtgaaggtgatcttgggagaggaccgggaagccaccggcgacctgctgagcattgacggg
gaggacgggatcgtgcgcatggacctggacgagcagctcaagatcctcaatctgcgcttc
ctggggaagctcctggaagcctag
DBGET
integrated database retrieval system
