Sarcophilus harrisii (Tasmanian devil): 100921359
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Entry
100921359 CDS
T02286
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shr03009
]
100921359 (NOP2)
Enzymes [BR:
shr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
100921359 (NOP2)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100921359 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
Methyltransf_25
FTA4
PCMT
Ubie_methyltran
TRM5-TYW2_MTfase
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
100921359
NCBI-ProteinID:
XP_012406205
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All DBs
Position
5:107113101..107127222
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AA seq
701 aa
AA seq
DB search
MGRKLDPTKKERRGPGRKARKQKGAETELAKFLPPVDDESGKRLSSRARKRAAKRRSESA
GAPETKKLSPSPKPLTKDAVQPSGKKGLKASGLKTGSQALFVPAKGKKRPAPPHSDEEED
SEDSDSGNEGGSWPSMDSEDDDMVDDYGVASEEESDEDDELLPIEKAAQKQRAQEAETLS
QWSSEDTDEEEEEVEHSPQPKFKNDDEENEDLQINLDKDEKFVLPSGKEIEEESAQAPDL
QSVHQRIQDIVGVLRDFGAQREEGRSRTEYLSRLRKDLATYYSYGDFLIGKIMDIFPLSE
LVEFLEANEVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIG
ATPEYLAGHYILQGASSMLPVIALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILAND
ANADRLKSVVGNLHRLGVTNTIISHDDGRHFPKVVGGFDRVLLDAPCSGTGIISKDPSVK
TNKDDKDIKRCAHIQKELLLSAIDSVNAASKTGGYIVYCTCSITVEENECVVEYALKKRN
VRLVPTGLDFGQEGFTHFRERRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFSNAIPQSKT
SDAVANPTDSTDSRLTNGLSATKAQGVPQPKVSPKLHKTKKVGKAKVQQLGAAGIKAQQQ
PTKKKTLFQNGKSVHKGPRTPTARTPSSSHRPPRKKQKAQS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagctggaccccaccaagaaggagaggcgcggccccggccgaaaagcccgg
aaacagaagggtgcggagaccgagctcgccaaattcctgccgccagttgacgacgaaagt
gggaagaggctctccagccgcgccaggaagagggcagccaagaggagatcagagtctgca
ggcgcgcctgaaaccaagaagctatctcctagtccaaagcctctaaccaaagatgctgtc
cagccctctgggaagaagggactgaaggcttctggactcaaaacgggaagtcaagcatta
tttgtacctgccaagggcaaaaaacgccctgccccacctcatagtgatgaagaggaggat
tctgaggacagtgattcagggaatgaaggaggtagctggccttctatggatagtgaagat
gacgacatggtagatgattatggtgtggcctcggaagaagaaagtgatgaagatgatgag
ctcttgcccattgagaaggctgcgcagaagcagagagcccaggaagcagaaactctgagt
cagtggagttcagaagacactgatgaggaggaggaggaagtagaacattctccccagcca
aaattcaaaaatgatgatgaagaaaatgaagatcttcagatcaacttggacaaggatgag
aaatttgtattgccctctggcaaggagatagaggaagagagtgcccaggctccagatctg
cagtctgtacaccagcgaatccaggacattgttggggtgctgcgggattttggggctcag
cgagaggaaggtcggtctcggactgagtacctgagccgacttcggaaagacttggcaaca
tactactcctatggagatttcctgattggcaaaataatggacatttttcctctttctgag
ctagtggagttccttgaagctaatgaggttcctcgacccatcactctaaggaccaacacc
ctgaaaacccgccgacgggatttggctcaggctttgatcaaccgtggggtgaatctggat
cctttgggtaaatggtcaaagaccggactggtggtgtatgactcttctgtgcccattgga
gccactcctgagtacctggcagggcattacatccttcagggtgcttccagcatgctgcct
gtcattgccttggcaccacaggaacatgagcgtattttggatatgtgttgtgctcctggg
ggcaaaactagctacatagcccaactgatgaagaacacgggagtgatccttgccaatgat
gctaatgctgatcgtctcaagagtgttgtaggcaatctgcaccgtttgggggtcaccaac
acgatcataagccatgatgatggacgtcatttccctaaggtggtaggaggctttgatcgg
gtactgcttgatgccccgtgtagtggcactggtatcatttctaaggacccatctgtgaag
actaataaggatgataaggacatcaagagatgtgctcatatccaaaaggaattgcttctg
agtgctatcgattctgttaatgctgcttccaagactggaggctacattgtctactgtact
tgctccattacggtagaagaaaatgaatgtgtggtagagtatgccctgaagaagagaaat
gtacggctggtacccacagggctagattttggccaagagggctttacccattttagagag
cggagattccatcccacacttcgctctaccaggcgtttctacccccatacccacaacatg
gatggcttcttcattgccaagttcaagaagttttccaatgctatacctcagtctaagaca
agtgatgcagtagccaatcctacagactccacggactccaggctgactaatggactttct
gcaactaaagcccagggggtcccccagcctaaagtcagccctaagcttcataagaccaag
aaagttggaaaggcaaaggtgcagcagctaggagctgcagggataaaggcccagcagcag
ccgactaagaagaagactcttttccagaatgggaagtctgttcataaaggcccccggact
cctacagcaaggactcccagctccagccatcgcccccccaggaagaagcagaaggctcag
agctga
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