Sarcophilus harrisii (Tasmanian devil): 100921375
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Entry
100921375 CDS
T02286
Symbol
TAF5
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100921375 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100921375 (TAF5)
03036 Chromosome and associated proteins [BR:
shr03036
]
100921375 (TAF5)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100921375 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
100921375 (TAF5)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100921375 (TAF5)
STAGA complex
100921375 (TAF5)
TFTC complex
100921375 (TAF5)
SAGA complex
100921375 (TAF5)
SLIK complex
100921375 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_RIG_1st
CDK5RAP3
RAB3GAP2_N
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
VPS8_N
Motif
Other DBs
NCBI-GeneID:
100921375
NCBI-ProteinID:
XP_031811640
Ensembl:
ENSSHAG00000018296
LinkDB
All DBs
Position
2:559336397..559352144
Genome browser
AA seq
825 aa
AA seq
DB search
MAALAEEQTEVVIKPDPEGPPALPATQPGDCPGEGSGGSHNSSHNGGGGGGVAAASAGGD
GGTPKPAVPPPAAAAAAAAAATAAPGGAAGAPAAAAEGIASQDRQTLLAVLQFLRRSNLR
ESEEILRREARLLEEAAGAGAQGEVDGPGAEATSALLSRVAAAAAAGPTGPGPGSGSGPG
PGACPASAGPGASGPAXGSSGAAPTAVAPAKVGVVAVEDQPDVSAVLSAYNQQGDPAMYE
EYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYY
QDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQE
HLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEIEVPLDDEDEEGEN
EEGKPKKKKPKKDSMGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGP
DCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKTATDLSL
IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF
TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRF
HPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLL
WDIGHGLMVGELKGHTDTVCSLKFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTA
TGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcagaggagcagacggaggtggtgatcaagcccgatccggagggaccg
cccgcgctccctgccacgcagccgggcgactgtccaggcgagggcagcgggggcagccac
aacagcagccataacggaggcggaggcggcggtgtcgcggcggcctcagccggcggcgat
ggcgggaccccgaagcccgccgtgcctcctccggcagctgcggcggcggcggcggcggcg
gcgacagcagccccggggggcgcggccggggctccggcagcggcggccgagggcatcgcc
tctcaggaccggcagaccctgctggccgtgctgcagttcctgcggcggagcaacctacgc
gagtccgaggagattctgcggcgcgaggcccggctgctggaggaggcggcgggagctggc
gcccaaggggaggtggacggacccggggccgaggccactagtgcgctgctgagccgggtg
gccgccgccgccgccgccggacccaccggcccgggccccggctcgggctccggccccggc
cccggcgcctgccctgcgtccgcgggccccggtgcctcggggccggcanncgggagctcg
ggggccgctccgaccgcggtcgctcctgccaaagttggagtagttgctgtagaagaccag
cctgatgtcagtgcagtgttgtctgcctacaatcaacaaggagatccagcaatgtatgaa
gaatactacagtggactgaaacatttcattgaatgttccttggactgtcatcgagcagaa
ttatctcagttattttatcctctatttgtacatatgtacttggaattggtctacaatcag
catgaaaatgaagcaaaatcattctttgagaagtttcatggcgatcaggaatgttattat
caggatgaccttcgagtgttatctagccttaccaaaaaggagcacatgaaagggaatgag
accatgttggattttcgaacaagtaaatttgttttgcgcatttcccgggattcttatcaa
ctcttgaaaagacacctccaggagaaacagaataaccaaatatggaacatagtccaggag
cacctgtacattgacatcttcgatgggatgcctcggagtaagcaacagatagatgctatg
gtgggaagtttggccggagaggcaaagcgagaggcaaataaggcaaaggtcttttttgga
ttgttaaaagaaccagaaattgaagttcctttggatgatgaagatgaagaaggggagaat
gaggaaggaaagcccaaaaaaaagaaacctaaaaaagatagtatgggatctaaaagcaaa
aaacaagatcctaatgctccacctcaaaacagaattcctcttcctgaattgaaagattca
gataagttggataagataatgaatatgaaagaaaccacgaaacgtgtgcgtcttggtcca
gattgtttaccttccatctgtttctatacattccttaatgcatatcagggtctcactgca
gttgatgtcactgatgattccagtctgattgcaggaggttttgctgactccactgttaga
gtatggtctgtgactcccaaaaaacttcgtagtgtgaagacagcaacagatctcagcctt
atagataaagaatcagatgatgttttagaaagaatcatggatgaaaaaacagcaagtgaa
ttgaagattttatatggtcacagtggacctgtttatggggcaagcttcagtcctgacaga
aactacctactttcctcctctgaagatggcactgttagactttggagtcttcaaacattc
acttgtttggtgggatacaaaggacacaactatccagtgtgggacacacaattttctcca
tatggatactattttgtgtcaggaggacatgatagagtagctaggctttgggctacagat
cattatcagcctttacgaatatttgctggccaccttgcagatgtaaattgtacacgattc
catccaaactctaactatgttgctacgggttcagcagacagaacagtaaggttatgggat
gtcttgaatggaaactgtgtaagaatcttcactggacacaagggaccaattcattctttg
gcattttctcccaatgggagatttctggctactggagcaacagatggcagggtacttctt
tgggatattggacatggattgatggttggagaattaaaaggtcatacagacacagtatgt
tcactcaagtttagtagagatggagaaattttagcatcagggtcaatggataacacagtt
cgtttatgggatgccataaaagcatttgaggacctagagactgacgattttactacagcc
actggacacataaacttgcctgaaaattcacaggatttattattgggaacctacatgacc
aagtcaacaccagttgtacatctccattttactcgaagaaacttggttttagctgcagga
gcttatagtccacaataa
DBGET
integrated database retrieval system
