Sarcophilus harrisii (Tasmanian devil): 100921419
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Entry
100921419 CDS
T02286
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04120
Ubiquitin mediated proteolysis
shr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100921419 (UBE4B)
04120 Ubiquitin mediated proteolysis
100921419 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100921419 (UBE4B)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100921419 (UBE4B)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
U-box type E3
100921419 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
100921419
NCBI-ProteinID:
XP_031818753
Ensembl:
ENSSHAG00000008568
UniProt:
G3W391
LinkDB
All DBs
Position
3:complement(573640554..573760001)
Genome browser
AA seq
1354 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLTSPQRENPPGPPVAAPAPGPSHNLGLNVHNM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRTLSDKELSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
TSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RNLMLSAGSNPGTSPMFCNVGSFSASSLSSLYDTSPTPNTPFSSYVPVTSSSCTSPSNAA
APISVPSISLSPHIPGESPSGSQASSPRYRPYTVAPPWGFSTSPTLRSSSLSALSSSPSP
PALSTSPSRQRPTAMGPPLFPASPGPTSRRPSALRIPSSTYDHPFSFLFLALSDMSGDSS
DEENEDDDGDDEDEDEGGGDDDFTCVQFGSSLGASGGASASDSCSDHFTIEMCKETDMLN
YLIECFDRVGIEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGSLTQPRSMQQQSLL
VPYMLCRNLPFGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMAL
GELCEIKFGKTHPICSLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSLSVFAEDDVKVV
EKYFSGPAITLENTRVVSQSLQHYLESARQELFKILHSILLNGETREAALSYMAAIVNAN
MKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETIDPTYIFHPRCRIVLPSDETRVK
ATMEEVTSWMTELYGEQSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNR
TVEDLKNNENQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYG
SVIQLLLRILDPAYPHITLPLNPDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCT
QDIAMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVP
SLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYIN
MLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLA
LATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEP
KKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVILKMRKAGIKSTIAIEKFKLLA
EKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTD
PFNRQMLTESMLEPVPELKEQIQTWMREKQNTDH
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgccttgctcggctggccggtgga
cagacttctcagccctctaccccactcacctctccacagagagaaaacccacctggtcct
cctgtagcagcaccagccccaggcccttcccataatcttggtctaaatgtccacaacatg
accccagctacctccccaataggtgcatcaggagtcgcgcatcgaagccagagcagtgaa
ggagtcagttcgctcagcagttcaccttctaatagccttgaaacacagtcgcagtctctc
tcacggtcccagagcatggatatcgacagtgtctcctgtgagaaaagcatgtcccaggtg
gatgtagattcaggaattgaaaacatggaggttgatgaaaatgatcgcagagaaaaaagg
actctctctgataaggaactttcatcaggttctgaggtatcagaagaacaggccttacag
ctggtctgtaagatctttcgcgtctcttggaaagaccgggacagagatgtcatttttttg
acttcactttctgcacaatttaagcagaacccaaaagaagtgttctctgattttaaggat
ttgattggccagattttaatggaagtgctaatgatgtccactcaaactagagacgagaat
ccttttgccagtctgacggcgacttcccagccgattgcaactgcagctcgatcaccggac
agaaacctgatgcttagtgcaggatctaatccaggaacgagccccatgttttgcaacgtg
ggttccttcagtgccagctcactgtccagcctctatgacactagtccaactcccaatacc
cctttctcaagctatgtgccagtgacgagctcctcttgtacctcaccttccaatgcagcc
gctccgatatctgtgccttccatttcgctcagtcctcatattccaggagaaagcccttca
ggaagccaggcttcgtctccgaggtatcgcccttacactgtggcccctccctggggcttt
tcgacttctcccactctgcggtcctcgagtctctccgctttgtctagctcaccaagcccg
cctgccctgtcgaccagtccttccagacaaagacccacagccatgggcccacctttgttt
cctgcttctccaggtcccacgagcaggcgtccctctgccctaaggattccttctagtaca
tacgaccatcctttctccttcctcttcctcgcactttctgatatgtctggggacagtagt
gatgaagaaaatgaagatgatgatggtgatgatgaggatgaggatgaaggtggtggtgat
gatgattttacttgtgtccagtttgggtccagtttgggagcctctggtggggcgagtgct
tctgattcctgcagtgaccatttcaccattgaaatgtgcaaggagacagatatgctgaac
tacctcatcgaatgttttgacagagttggaatagaagaaagaaaagcaccaaagatgtgc
agccaaccggcggtcagccaattactgagcaacatccgctcacagtgcatatcccatgct
gcgttagtgttacaaggctcattaacgcaaccaaggtccatgcagcagcagtctctcttg
gtaccctatatgctgtgtaggaacctcccatttggtttcatccaagagctggtgagaaca
acccaccaggatgaagaagtgttcaaacagatctttatccctattttacaaggtttggct
cttgctgccaaagagtgctcccttgatagtgactactttaaatatccccttatggcatta
ggtgaactctgtgaaattaagtttgggaaaacccatcctatttgtagtttggtcgcctct
ttgcctttgtggctgccgaagtccttaagcccaggttctgggcgggagttgcaaagactc
tcttatttgggggccttcttcagtctctctgtctttgctgaggatgatgtaaaagtggtt
gaaaagtatttctcagggcctgccattaccctagagaacacccgagtggtcagccagtca
ctacagcattacttggagtcagccagacaagaattgttcaagatcctacatagtattttg
ctgaatggtgaaactcgtgaggcagctctcagttacatggcagctattgtcaatgccaac
atgaaaaaagcgcagatgcagacagatgatcggttggtgtctacagatgggtttatgctg
aatttcctttgggtgctgcagcagttaagcacaaagattaagctagaaacgatagatccc
acttatatattccatccacggtgtcgtattgttcttccaagtgatgagacacgagtgaaa
gcaacaatggaggaggttactagttggatgactgaactttatggagaacagtctccattt
tctgagccgaaattccctacagaatgcttcttccttacgctacacgcccaccacctctct
attttgccaagctgtcgtcgttatatacgcagactccgggccatcagggagcttaacaga
actgtggaagatcttaaaaataatgaaaatcagtggaaagattcccctctggcaactaga
catcgggaaatgctgaaacgttgcaaaactcaactcaagaaattggtgcgatgcaaagcc
tgcgctgacgcaggtttgctggatgaaaacttcctgcgaagatgtctgaatttctatggc
agcgtaatccagctgctgctgcgcatccttgaccccgcctaccctcatatcacactgcct
ttaaatccagatgtccctaaggtgtttgcagcattgcctgagttttatgtggaagatgtt
gctgaatttttattttttattgtacaatactcacctcaggtgctgtatgagccctgtact
caggatattgccatgttccttgttgtgatgctctgcaaccagaactacattcggaatcca
tacctggtggccaaattggtggaggttatgttcatgaccaacccttctgtccagccacgg
actcagaagttttttgaaatgatagagaaccaccctctttccaccaagctgttagtcccc
tcactgatgaagttttatacagatgttgagcatactggagccaccagtgagttctatgac
aaattcacaatccgctatcatatcagcaccatttttaaaagtctttggcaaaatatagcc
caccatggcacctttatggaagagttcaattctgggaagcagtttgttcggtacataaac
atgctgataaatgacacaacgtttttgttggatgagagtctggagtccttgaagcggatc
catgaagtgcaagaagaaatgaagaacaaggaacagtgggacctgttgccccgggaccag
cagcaggctcgtcagtctcaactcgctcaggacgagcgtgtgtctcgctcttaccttgca
ctagcaacagaaacagtggatatgtttcatattctcaccaagcaagtccagaagcctttc
ctcagacctgaacttggaccacgcttggctgctatgctgaattttaatcttcagcaacta
tgtggccccaagtgccgtgacctgaaagtggaaaaccctgagaaatatgggtttgaacca
aagaagctcttggaccaattgacagatatttacttgcagctagactgtgcccgttttgct
aaggctattgctgatgaccagagatcatatagcaaggaactatttgaagaggtgattttg
aagatgcgcaaagcaggaatcaagtccacaatagcaatagagaagtttaagctgctggca
gaaaaggtggaggaaatagtagccaagaatgcccgggctgaaattgattacagtgatgct
ccagatgaattcagagaccctttaatggacaccctaatgactgaccctgtgagattgccc
tctggcaccatcatggaccgttcgatcattcttcggcacctgctgaattcacccactgat
cccttcaatcgacagatgctgacagagagcatgctggagccagtgccagaattgaaagaa
caaatacaaacctggatgagagagaaacagaacactgatcattag
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