Sarcophilus harrisii (Tasmanian devil): 100921642
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Entry
100921642 CDS
T02286
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100921642 (SHANK2)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_4
Ank_3
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
100921642
NCBI-ProteinID:
XP_031799466
LinkDB
All DBs
Position
6:237298489..237838403
Genome browser
AA seq
1901 aa
AA seq
DB search
MRLVRRRQDSFGAMPRSPTSSEDEMAQSFSDYSMESESDSSKEETIYDTIRATSEKPTVK
MEESQDNTLVIRVIIQDLQQTKCIRFNPDASVWVAKQRILCTLNQSLKDVLNYGLFQPAS
NGRDGKFLDEERLLREYPQHVPKGIPSLEFRYKRRVYKQANLDEKQLAKLHTKTNLRKCM
DHIQHHSVEKVSKMLERGLDPNFHDTDTGETPLTLAAQLDNSVEVIKALKNGGAHLDFRA
KDGMTALHKAARAKNQVALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPYCCELLLHEH
ATVGCKDENGWHEIHQACRYGHVHHLEHLLFYGADMGAQNASGNTALHICALYNQDSCAR
VLLFRGGNKELKNYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPTYSNRRRRPP
STLAAPRVLLRSNSDNNLNVNNLPEWSVCSSASSHRSLSPQLLQQMQGNPNGTVKTIGSY
TPGPRSRSPSLNRLGEDARRQQQVPPAPQRHISAGFAPGAAKDAMSAFDYPGPKRKLYSA
VPGRLFVVVKPYQPQVDGEIHLHRGDRVKVLSIGEGGFWEGSTRGHIGWFPADCVEEVQC
KPNESKPETRTDRTKKLFRHYTVGSYDSFDASSDCIIEEKTVVLQKKDNEGFGFVLRGAK
ADTPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMI
RQGGNHLILKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASV
RKKKDKVDEVVPAALHRGRRRSPPHSTTGIPRPCLKRRNLAFQLREAGVPCLSSEPTGAP
QNTDPGRPALDHALLSPAQSKGPWNLTHVLFALQSIYERQGIAVMTPTVPGSPKAPFLGI
PRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSLPPSPP
PPSPTAYNSPKSPTARAYGTIKPPFNQNSVPKVSPSPRPETIGTVMREKGLYYRRELDRY
SLDSEDLYGRNAAAQANFRAKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNV
EDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDAQAGEPPGQLRPDDSLGVSSPFA
AAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPGPPVPRARPSKFPEDEVFGSEDG
LGQPPSPTPGEPENHPGGGEAGSQSDLDGARTLNSVPKAKGPENSTAPAAKGGSVAGPEN
YVHPLTGRLLDPNSPLALALSARDRALKETQQGGGKGEATKADLNKPLYIDTKMRPGMEP
AFPSMGRPGARGPLRRQETENKYELDKDKRGDEKKNMLISIVDTSQQKTAGLLMVHTVDA
AKAEDSPEEEEERADGGAEPGSSPPEVPESVPETEGALQVAAAGPTKGMAAAGSVDEPVV
LPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRAAPTPPPPDPGKPRKDSSP
SPPLAPGPPANSVDGKKPAGLSNCLPAAFLPPPESFDNVADSGIEEVDSRSSSDHHLETT
STISTVSSISTLSSEGGEPLDTCTVYADGQAFMVDKPPVPPKPKMKPVITKSNAPPREAL
AEESADGFGLALPVQAPPLPPAGTAKALQPRTSKLWGDIPEVKSPILSGPKANVISELNS
ILQQMNREKSTKPGEGLDSPTGTKTASLSTRSTDVMSTVSGTRSTTVTFTVRPGTTQPIT
LQSRPPDYDGRTAVTRRAPSPVVSPTEIAKEALAAPLTAVSAAAPSPTLPEVFSLPSQPS
PGDLFGLSAAARSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKETFM
DNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgagactggtccggaggagacaagacagcttcggagccatgccgcggagtcccacgtcc
agcgaagatgagatggcccagagcttttccgattattcgatggagtccgagtcggacagc
tccaaagaggaaaccatctatgacaccatccgggcgacctcggagaagcccacggtcaag
atggaggagagccaggacaacactctggtcatccgcgtcatcatccaggacctgcagcag
acgaaatgcatccgatttaacccagatgcttctgtgtgggtggcaaagcagcggattctg
tgcaccttgaaccagagtctcaaggatgttctcaactacgggctcttccaacctgccagc
aatgggagagacgggaagttcttggacgaggagcgcctcctccgggagtacccacagcac
gtgcccaaaggaatcccttctctggagttccggtataaaaggcgggtgtacaagcaggcg
aatctggatgagaagcagctagccaagctccataccaagacaaacctgaggaaatgcatg
gaccacatccagcatcactcggtggagaaggtctccaagatgctggagaggggcctggat
cccaacttccacgacacggacacaggagaaacgccgctgactctagcagcccagctcgac
aactccgtggaggtgatcaaagcactgaaaaacggaggcgcccacctggatttccgagcc
aaggacggaatgaccgccctccacaaagctgcccgagccaagaaccaggtggccctcaag
accctgctggagctcggggcctctccggactacaaggacagctacggcctcacgcccctc
taccacacagccgtcgtcggaggcgacccctactgctgcgagctgctgctccacgagcac
gccacagtcggctgcaaggacgagaacggctggcacgagatccaccaggcctgtcgctac
ggccacgtccaccaccttgagcacttgctgttctacggagccgacatgggggcccagaat
gcctccgggaacaccgccctgcacatctgtgccctttacaaccaggacagctgtgctcga
gttttgctgttccgcggaggcaacaaggaattaaagaattacaatagccagacgccattc
caggtggcgataatcgcaggaaactttgagctggccgagtacattaagaaccacaaggaa
acagatattgtgccattcagagaggccccgacgtactcgaaccggcggcggagacccccg
agcacgctggcggccccccgcgtcctgctgcgctccaacagcgacaacaacctcaacgtg
aacaatcttcccgagtggtccgtgtgctcctcggcctcctcacaccgcagcctttcgccc
cagctcctgcagcagatgcagggcaacccaaatggcacagtgaaaaccatcgggagctac
acgccggggccgcgcagccgctccccgtcactgaaccggctcggggaagatgccaggagg
cagcagcaagtcccgcccgcgccgcagcggcacatcagcgccggcttcgctccgggtgcc
gccaaggatgccatgtccgcctttgactatccgggtcccaagcgcaagctctacagcgct
gtgcccgggagactgtttgttgtcgtaaagccatatcaacctcaagtcgatggagagatc
caccttcaccggggggacagggtcaaagtgctgagcatcggggaaggcggcttctgggaa
ggcagcacgcggggacacatcgggtggtttcctgccgattgtgtggaggaagtccagtgc
aaaccgaatgagagcaaaccagagactcgcactgaccgcaccaagaagctcttccgacac
tacacggtgggctcctatgacagcttcgacgcctccagtgactgcattatcgaggagaag
accgtggtcctgcagaagaaagacaatgagggcttcggcttcgtgctgcgcggggcgaaa
gctgacaccccgatcgaagagttcaccccgacgccggcgttccctgccctgcagtacctg
gagtctgtggatgaaggaggagtggcgtggcaggcgggcctgagaacgggggacttcctc
atcgaggtaaacaatgagaacgttgtcaaagtcggtcacagacaggtggtgaacatgatc
cgccaaggtgggaaccacttaatcctcaaggttgtcacggtaaccagaaacctcgatcct
gatgacacagccaggaaaaaagcccctccgcctcccaagcgagcgccgaccacagccctg
accttgcggtctaaatctatgacctccgagctggaagagcttgtggacaaagcttcagtt
cggaagaagaaggataaagtcgacgaggtcgttccagctgcgcttcatcgaggacgcagg
agaagccccccccactctaccactgggattccccgtccttgtttgaagaggagaaatctc
gccttccagctcagagaggctggggtcccatgcctaagctccgagcccacgggggcccct
cagaacacagacccgggccgaccagccctggaccacgctcttctttctcctgcccagtct
aagggcccctggaacctaacccatgtgctctttgctttacagtccatttacgagcggcag
ggaatcgctgtgatgacccccacggtccccggaagtccaaaggccccgttcctgggcatc
cctcgaggtacgatgagaaggcagaaatcaatagacagcagaatctttctctcaggaata
acggaggaagagcgccagttcctggccccccccatgctcaagttcaccagaagcctctcc
atgcccgacacctccgaagacatccctcctccgccacagtccctgcctccttcgccgccg
ccaccctcccccaccgcctacaattctcccaagtccccgacggccagagcctacgggacc
atcaagccccccttcaaccagaattcggtgcccaaggtctccccctcccctcggccggag
accatcggcacggtgatgcgggagaagggcctgtactacaggcgggagctggaccgctac
tccctggactcggaggatctctacggccgcaacgccgccgcccaggccaacttccgggcc
aaacggggccagatgccggagaacccctactcggaggtaggcaagatcgcaagcaaggcc
gtgtacgtgcccgccaagccggcccggaggaaggggatgctggtgaagcagtccaacgtg
gaggacagccccgagaagacctgctccatccccatccccaccatcatcgtcaaggagccg
tccacgagcagcagcggcaagagcagccaggggagcagcatggagatcgacgctcaggcc
ggcgagccccccgggcagctgcggccggacgacagcctgggcgtcagcagccccttcgcc
gcggccattgccggggccgtgcgggacagggagaagaggctcgaggccaggcggaactcc
ccggccttcctctccacagacctgggggatgaggacgtggggctgggcccggggccgccc
gtgcccagggccaggccttccaagttcccggaggacgaggtgttcggcagcgaggacggc
ctgggccagccgccgtcgcccacgccaggggagcctgagaaccacccgggcggcggcgag
gccgggagtcagagcgacctggacggcgccaggaccttgaactcggtccccaaagccaaa
gggcccgagaacagcacggcaccagctgccaagggcgggagcgtggcgggccccgagaac
tacgtccaccccctcaccgggaggcttctggaccccaactccccgctggccctggccctc
tcagcccgggaccgagccctgaaggagacgcagcaggggggcggcaagggggaggcgacc
aaggcggacctaaacaagccgctctacatcgacaccaaaatgcgtcccggcatggagccg
gccttcccctcgatgggccggccaggcgcgcggggcccgctgcggaggcaggagacggag
aacaagtacgagctggataaggacaagaggggcgacgagaagaagaacatgctcatcagc
atcgtggacacctcccagcagaagacggccggcctgctcatggtgcacaccgtggacgcc
gccaaggccgaggactcccccgaggaggaagaggagagggccgacggcggcgccgagccc
gggagctcccccccggaggtgcccgagagtgttcccgaaaccgaaggtgctttacaggtc
gctgccgccggccccaccaaggggatggcggcggcgggctccgtggacgagcctgtggtc
ttgcccttccggatcccgccccctccgctggcctccgtggatctcgacgaagattttatt
tttacggaaccgttgcctccgcccctcgagtttgcaaacagttttgatatccctgacgac
cgggccgcgcccaccccccctccccccgacccggggaagccgaggaaagactcctccccg
tccccccccctcgcccccggcccacccgccaactccgtggacgggaagaagccggcgggc
ctctcaaactgtctgccggccgcgttcctgccgccccccgagagcttcgacaacgtggcc
gactccgggatcgaggaggtggacagccggagcagcagcgaccaccacctcgagaccacc
agcactatctccaccgtgtccagcatctccaccctgtcctcggagggcggggagcccctg
gacacgtgcacggtctatgcagatgggcaggcgtttatggtcgacaagccccccgtgcct
ccgaagccaaaaatgaagcccgtgatcaccaaaagcaacgcgccccccagagaggccctg
gcggaggagagcgccgacggctttgggctggccctgcccgtgcaggccccgcccctgccg
cccgcggggaccgccaaggccctccagccaaggacctccaagctgtggggggacatcccc
gaggtcaaaagccccattctctcaggccccaaggcgaacgtcattagcgaattgaattca
atcctgcagcaaatgaaccgagagaaatccacgaaacccggggagggattggattcaccg
acaggaaccaaaaccgccagcctcagtacgaggagcacggacgtcatgagcaccgtctca
gggacgcggagcacgacggtcaccttcaccgtccgccctggcaccacccagcccatcacc
ctgcagagccggcccccggactacgacggcaggaccgccgtcacgagacgtgccccgagc
cccgtggtgtcccccacggagatcgccaaggaggccctggccgcccccctgacggccgtc
tccgctgcggccccttcgcccaccctgcccgaggtttttagccttccgagccagccatct
cccggggacttgtttggcttgagcgcagcagcgcgcagcaggtccccgtctccctcgata
ctgcaacagccaatctcaaataagccttttacaactaaacctgtccacctgtggaccaag
cccgacgtggctgattggctggaaagcttaaacttgggtgagcataaagagaccttcatg
gacaatgagatcgacggcagtcacttaccaaacctccagaaggaagacctcatagacctc
ggagtgactcgggtcggccaccggatgaacatcgagagagcgctgaagcagctgctggac
agataa
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