Sarcophilus harrisii (Tasmanian devil): 100921671
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Entry
100921671 CDS
T02286
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100921671 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100921671 (DMXL1)
Membrane trafficking [BR:
shr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100921671 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
100921671 (DMXL1)
RAVE complex
100921671 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EML
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
100921671
NCBI-ProteinID:
XP_012398069
Ensembl:
ENSSHAG00000003035
LinkDB
All DBs
Position
1:238822987..238954355
Genome browser
AA seq
3051 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNIICVFEPVNLLKQKNTSNVELYNQWQKSGQFFLDSMAHNITW
DPTGSRLLTGSSCLQLWSNINSEKQCEDENSEKTDLNFGDWRCIWHCRTASQVHLMRFSP
DGEFFATAGKDDCLLKVWYNTDSWRSTVTSQDKGLEKQTQGEVDFSFVYLAHPRAVNGFS
WRKTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDSLLYEGNYNHWNDSVNLTNNFKR
NASSKERVQNALEVNLRHFRRGRRRSLGLVAHTGYLPHQQNPHQVHRNTPLQANALCHFH
IAASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLRKSFE
QPPSEASMEESNQVNGKSDEETDDAADDLKAIPEKRELSSEKNILNSSCIPLPSAIIDHQ
IEVLLSEWSKNADMLFSIHPVDGSLLIWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGD
ANSLCRSIVMYACTKNVDLAIQQGKQKPSGLTRSTSMLISSGHSKSTNSLKLSIFTPNVM
MISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHH
NALRTPDIDNLKQPYDALNSEEISLGKPSRSTVDVTFQDPNAVYSELILWRVDPVGPLSF
SGGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVTD
AKKLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIELDPITELHGRKTQLLHVFQEDFI
LNTLEKKSLGKGSILSDSGTQPNGFSEKFYLVVIESTQDNHSLLHMWNLHLKSIPVSVDE
KIDKSVSGTVSQQEEFSSPEKIHSPFSKKYQACRENLQSTSKLTLSSEMVYSQELNLPEG
VEIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTAVETSTSENTAKNNL
EYIWEEWPLLIEDGLPSSSVVTIPGRPIEVSCAHTNRLAVAYKQTTSNDRSSQDFLMHVS
IFECESTGGSFWILEQTIHLDELSAMLDSGISIDSNLVAYNKQEVYLSNKEHIMPYTKHL
VHLDWMSREDGSHILTVGIGSKLFMYGQLAGRVQEQTGKEGLTFPLWENTKVLSQSKFVL
LRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPPSKQEPVMTGSYDGST
PSIISLVKPSNSSGSGLHLSKKTLTRSMTSLAQKICGKKTAFDLDVDMEDSGLFEAAHEL
SPTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAVSNQERRLRSVTISA
SGSTTRDPPTFNKTENTDYTEIDSVPPLPLYALLAADDDSPYTSSSEKSSNCSHLNKTSQ
LHDESYNELFQISALTTDDIHIFETEEENTKPKVIDLSQYSPTYFGPEHAQVLSGHLLHS
SLPGLNRMEQMSLMALADTIATTSTDIGESRDRNQGGETLDECGLKFLLAVRLHTFLSTS
LPPVYRAQLLHQGLSTSHFAWAFHSVAEEELLNMLPAMQKNDPTWSELRAMGVGWWVRNT
RVLRKCIEKVAKAAFYRKNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGHNFTDD
RWRKAALKNAFSLLGKQRFEHSAAFFLLAGCLKDAVEVCLEKLNDVQLALVIARLYESEF
DTSATYKSILHKKILGIDSSVKEYHSMNMNVHDDPFLRSMAYWILEDYSKALDTLIKQPM
KEEEDQGMASSTCNPAVFNFYNYLRTHPLLLRRHFVSSDASSTQICLTGENGLAGKINLS
ERRLFFTTAHAHLKAGCPMLALEVLSKMPKVIKRTKLFYRTSSFPDTSKDCSPSSPLKLD
TKDYKSSSIDWSECVINGLRSSSDGLSDKQSNSSLSFDWSQPSIVVQDESLDLKWDSDND
VENEDTALSMKEIKPLQIKMDEKINETNSSYTDSFSTVENDILNPSEDIIAVQLKFRACL
KILTIELRTLSTGYEIDGGKLRYHLYHWLEKEVVALQKACDYCSDVEDMQCVFSENVDET
VLNENTKDLFDPPKVNQLRDNFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMEL
ILLLQESQQETLEPIFPGPLPDQTSIPLLFACTASAKTVVANPLLHLSNLTHDILHAIIN
LDSPPHPDTQNNKVYVMHTLAASLSACIYQCLCGGHNYNSVQTNQFTGMAYQTLLFPHRH
SLKTTSLDETITPNTSPAQWPGITTLIRLLNSAGEEAQSGLTVLLCEILTAVYLSLFIHG
LATHSSNVLFRIVAHPLNEKMWSAVFGGGAHISGREQTASKAVTVEDGEKQHKRSRSSKI
SSKECLQQSSSSPIGDQETLTYKEKFIPPELSIWDYFIAKPFLPPSQSRAEYDSEESQES
GDDENEDGDEDVLTSDYQLQEHANSNSYSWSLMRLAMVQLVLHNLKTFYPFAGHDLSELP
VSSPLCHAVLKALQCWEQVLLRRLEIHGGPPQNYISIHTSEESLSGGPAILRHKALLEPM
NTPFKSKHHLALSVKRLWQYLVKQDEIQETFIRNIFTKKRCLNESLEDHSETIKNSIMEE
PNFKKIEAELGYPGGKARIIHKESDIITAFAVNRANRNCIAIASSHDIQELDVSGILATQ
IYTWVDDEIELETKGSDDFLVIHARDDLASVQGTTPYTHSNPGTPINMPWLGSTQTGRGA
SVMIKKTINNVRRMASHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFN
HQGNKFGIVDADGYISLYQTNWKCCPVTGNTPKPYLTWQCHNKTANDFVFISSSSLIATA
GLSTDNRNICLWDTLVAPANSLVHPFTCHDSGATVLAYAPKHQVLLSGGRKGFTSVFDLR
QRQQRQFFQSHDSPVKAIAVDPTEEYFVTGSAEGNIKIWSLSTFNLLHTFINEHARQSIF
RNIGTGVMQIETGPANHIFSCGADGTVKMRILPDRFSSLSEMLKNDVKFML
NT seq
9156 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtcctaaccggggccgtgaaccccggggaccactgcttctccgta
gggagcgtcggtgaccagcggttcacggcctatgcttctggatgtgatgttgttatactg
ggaagtaactttgaaagattacagataatccctggagctaagcatgggaacattcaagta
ggatgcgttgattgttcaatgcaacaaggcaagattgcagcatcatatggaaatattatc
tgtgtttttgagccagttaacctactaaaacaaaagaatacttctaatgtggaattatat
aatcagtggcagaaaagtggccaattttttctggattccatggcacacaatataacttgg
gatcccacaggtagtcgtcttttaactggttctagctgtttgcaactttggtcaaatatt
aactcagaaaagcagtgtgaagatgaaaattctgaaaaaacagatcttaattttggggat
tggcgatgtatctggcactgtagaactgcttctcaagttcatctaatgagattttcacct
gatggagaattttttgctactgctggaaaggatgactgtcttttgaaagtgtggtataat
acagacagctggcggtccacagttacctctcaagataaaggtctagaaaaacaaacacaa
ggagaagttgacttttcatttgtttacctggcacatcctagagctgttaatggattttcc
tggcggaagaccagcaaatatatgcctagagcttctgtatgtaatgtattgttgacttgc
tgcaaagataatgtgtgtcgtttatgggtagagacttttttaccgaatgatagtctctta
tatgaaggaaactacaaccattggaatgattcagttaatttaacaaataacttcaagaga
aatgcttccagtaaggaaagagttcaaaatgctttggaagtcaacctgaggcattttcgt
agaggacgaagaagatcacttggacttgtagcacatactggctacctaccacatcagcag
aatcctcatcaggtccataggaatacccctctgcaagccaatgctctttgtcactttcat
attgcagccagcatcaatccagccacagacattccgttacttccttctattacatctctc
agccttggtgaaaatgaagaaaagagtgggccttttgttgtacactggcttaacaataaa
gaattgcattttactttatcaatggaagtctttttacagcagcttcgaaagagttttgaa
cagccaccttcagaagctagtatggaagaatctaatcaagttaatggaaaatctgatgaa
gaaacagatgatgctgctgatgatctgaaagcaattcctgaaaaaagagagttgagtagt
gaaaaaaatatactcaattcaagctgtatacccttaccatctgctattattgatcatcag
attgaagtgcttctgtctgaatggagtaagaatgcagacatgcttttcagtattcatcca
gtggacggttctttgctgatatggcatgtggattggctggatgaatatcagcctggtatg
tttcgccaggtgcaggtgtcatttgtttccagaattccagtagcttttcctacgggtgat
gcaaattctctctgcagaagcatagtcatgtatgcttgtaccaagaatgttgacttggct
attcagcaaggcaaacaaaaaccctctggtctcacacgttccacatcaatgctcatctct
tctggtcacagtaaatcaactaatagtttaaaattaagtatcttcactcctaatgtcatg
atgatttcaaagcatgcagatggatccttgaatcagtggttagtcagctttgcagaagaa
tctgccttttctacagtgctcagtatttcccataaatctagatattgtggtcatcgcttt
catcttaatgatttagcttgccattcagtattaccattgctactaacaacatcccatcac
aatgcattgaggacaccagacattgacaatctgaaacagccttatgatgctttaaactct
gaggaaatttcattaggaaagcctagtagaagtactgtagatgtaacattccaggatcca
aatgcagtttatagtgaacttattctttggagggttgatccagttgggccattgtctttt
tctggaggtgtttcagaacttgcaaggattaattctcttcatgtttcggccttttccaat
gtggcatggctacctaccctcatacctagttattgtctaggtgcttattgcaactctcct
agtgcttgctttgtggcaagtgatgggcaatatttgagattgtatgaagctgtcactgat
gccaaaaaacttttatatgaactatccaaccctgaaatttctaaatatgttggtgaagtg
tttaacattgtaagtcaacaatcaacagcaagaccaggatgcattattgagttagatcct
attactgaacttcatggcagaaaaacacagctgcttcatgtttttcaagaagacttcatt
ttgaataccctagagaagaaaagtctgggaaagggcagcattttatctgattctggtacc
caacctaatggattttctgaaaaattctacttagttgtcatagagtctactcaagacaac
cactcattacttcatatgtggaatttacatttaaaatcaattcctgtctcagtagatgag
aaaatagataaaagtgtgtctgggacagtatcacaacaagaagagttttcttctccagaa
aagatccattctcctttttcaaagaaatatcaggcttgcagagaaaatcttcaaagtact
agtaaattgactctttcttcagaaatggtatatagccaagaactgaatttgccagaagga
gttgagataatcagtgttaaaccatcagcaggacatctaagttcctcttccatatatcca
gtatgcagtgctccctatttattggcaacttcatgttccgatgaaaaagtgagattctgg
agatgcagagtaacagctgtagagacttcaacatcagagaatactgcaaaaaataatctt
gagtacatttgggaagaatggcctttactcattgaggatggacttcctagtagcagtgtt
gtaactattcctggcagaccaatagaagttagctgtgcacatacaaatcgtttagctgta
gcctacaaacagactacatctaatgatagatcttctcaagactttttgatgcatgtaagt
atttttgaatgtgagtccacaggaggttcattttggatccttgaacagacaattcattta
gatgaattaagtgcaatgttggattctggtattagtattgatagcaatttagtggcctac
aataaacaagaagtttatttatctaataaagagcatatcatgccatatacaaagcacttg
gttcacttagactggatgtctagagaagatggttctcatatacttactgtaggaatcgga
tcaaaactctttatgtatggacaactggctggcagagttcaggaacaaactggtaaagaa
ggcttgacattcccattatgggagaacactaaagttttgtctcagtctaagtttgttcta
ctccgctgtgtcgatttggtttcttcagtagaaggatcaccaccttttcctgtttcttta
tcttgggtacgtgatggtatccttgtggtaggaatggactgtgagatgcatgtttattcc
caatggcagccaccttccaaacaagaaccagtgatgacaggctcatatgatggaagtact
ccatctatcataagtttagtgaaaccaagtaattcatcaggatctggtttacacctatca
aagaaaacattaactcgttccatgactagtcttgcacagaaaatttgtggaaagaaaact
gcttttgatcttgatgtagacatggaagattcaggtctttttgaagcagctcatgaactc
tctccaactttacctcaatatcatcccttgcaacttttagaactcatggatcttggtaaa
gtgcgtagagctaaagccattctatcccatcttgttaaatgtattgcaggagaagttgtg
gctttgaatgaagcagtatccaatcaagaacgccggcttagatctgttaccattagtgca
agtgggagtaccacaagagatcccccaacattcaataaaactgaaaatacagactataca
gaaatagattcagtaccccctctccctttatatgccttacttgctgcagatgatgatagc
ccttatacttcatcttcagaaaaatccagtaattgtagtcacttaaacaaaacaagtcaa
ttacatgatgaaagttacaatgagcttttccagatatcagcactaactactgatgatatt
catatctttgagacagaagaagaaaatacaaagcccaaggttattgatctttctcagtac
agtccaacttactttggtcctgaacatgcccaggttctttcaggccatttacttcattct
agcttaccaggtctcaaccggatggaacagatgtctttaatggccttagcagatactatt
gcaactacaagtactgacattggtgaaagcagagacagaaaccaaggtggagaaactctt
gatgaatgtggcttaaaatttcttttggctgttcgacttcatacttttctctcaacttcc
cttccacctgtttatcgagctcaactccttcatcaaggtctctctactagtcattttgcc
tgggcatttcactccgtagcagaagaagagttactgaatatgctgcctgctatgcagaaa
aatgatcccacctggtcagaactaagagctatgggtgtaggatggtgggttcgaaatact
cgagttttacgcaagtgtatagaaaaggtagcaaaagcagctttttatagaaagaatgat
ccattagatgctgccattttttaccttgcaatgaagaagaaggctgtgatatggggttta
tacagatctcaaaaagataccaagatgacacagttttttggacataattttactgatgac
agatggcgtaaggcagcgttaaagaatgctttttctttactaggcaaacaaagatttgaa
cattctgcagcattttttcttctagctggttgcctgaaagatgcagtggaggtttgtcta
gaaaaattgaatgatgttcagttggctttggtaatagcaagactttatgaatctgaattt
gacacatctgcaacatacaaatctatattgcataaaaaaattttgggaattgattcttca
gtcaaagaataccattcaatgaacatgaatgtacatgatgatcctttccttcgaagtatg
gcatattggatcttggaagactacagcaaggctctagatacattaataaaacaacccatg
aaagaggaagaagatcaaggcatggcatcttctacctgtaaccctgcagtgtttaatttc
tacaattacctcaggacgcatccacttttgctgagacgccattttgtttcttctgatgca
tcttccacacaaatatgcttaacaggagaaaatggattagcaggaaaaattaatttaagt
gagagaagattgtttttcaccactgcacatgctcacttaaaagctggttgtcccatgttg
gctttagaagtattatcaaaaatgcccaaagtcatcaagaggacaaaacttttttacaga
acttctagttttccagataccagtaaagattgttctccttcttctccattaaagttagat
acaaaggattataaatcatctagtatcgattggtctgagtgtgtgataaatggtttgaga
tcttcttcagatggtttatcagataaacaatcaaattcaagtctttcatttgattggagc
caaccaagtattgtagtccaggatgaatctttggacctaaagtgggatagtgataatgat
gtggaaaatgaggacacagctctctcaatgaaagaaataaaacctttgcagataaaaatg
gatgaaaagataaatgaaacaaattctagctacacagactctttcagcacagttgaaaat
gatatcttaaatccatcagaggatatcattgctgtacaattgaaatttagagcatgttta
aagattctcacaatagaattgagaacattatccactggctatgaaatagatggtgggaaa
ttgaggtaccatctataccactggcttgaaaaggaagtggtagctcttcagaaggcttgt
gactattgttcagatgtggaggatatgcagtgtgtttttagtgaaaatgtggatgaaact
gtattaaatgaaaatacaaaagatttatttgatccacctaaagtaaatcaattgagagat
aatttccaaaaaagacgacagtggcttttgaaatatcaatctcttctaaggatgttcctt
agttactgcatactacatggatctcatggtggtggccttgcctctgtgagaatggaatta
attctacttttgcaagaatctcagcaggaaacattggaaccaatttttcctggccctctg
ccagatcaaacttcaatacctcttctctttgcatgtacggccagtgccaaaacagtagtt
gccaatcctctattgcatcttagcaatttgactcatgatatactacatgccataataaac
cttgattcaccaccccatcctgacacccaaaacaataaagtatatgtaatgcatacttta
gcagcatccctctctgcttgtatttatcagtgtctttgtggtggccataactataattca
gtgcaaacaaatcagtttactggaatggcataccagacattgctgtttcctcaccggcat
tccttgaaaacaacaagcttagatgaaacaataactcctaatacatctccagctcaatgg
ccaggaattactactcttattcgcctgttgaattctgctggggaggaagctcaatcggga
cttacagttttgctttgtgaaattctcacagcagtttatcttagtctcttcatccatggt
ttggcaacacattctagtaatgtgctatttcggattgtggcccatcctctaaatgaaaaa
atgtggtctgctgtatttggtggaggagcacatatttctggcagagaacaaacagcatca
aaagctgtaactgttgaagatggtgaaaaacaacacaaacgatctaggtcatcaaaaata
tcttccaaagagtgccttcaacagagctcttcctcacctataggagaccaggagactttg
acttataaagaaaaatttattcctcctgagcttagtatctgggattatttcatagcaaag
ccttttttaccaccttcccaaagtagagcagaatatgattcagaagagagtcaggaaagt
ggtgatgatgagaatgaggatggtgatgaagatgttttaacttcagattatcaactccaa
gagcatgctaattcaaattcatacagttggtcattgatgagattggctatggtgcagttg
gtgcttcataatttgaagactttctatccatttgctggtcatgatctttcagaacttcca
gttagctcaccactatgtcatgcagttctgaaagctcttcagtgctgggaacaagtcctt
ctccgaagacttgaaatacatggtgggccacctcaaaattatatttcaattcatacctct
gaggagagtttgtcaggaggtccagcaatacttcgccacaaagccttgcttgaacctatg
aacacccccttcaaatctaaacatcatctggctctgtcagtgaagaggctttggcagtac
ttggtgaaacaggatgaaattcaagaaacttttatcagaaatatatttactaagaagagg
tgcctaaatgagtcattagaggaccacagtgaaaccatcaaaaattctataatggaggag
ccaaacttcaaaaagatagaagctgaattgggttacccaggtggtaaagcaagaattatc
cacaaagaatctgacattattactgcattcgctgttaatagagcaaatagaaattgcata
gcaatagcttccagtcatgatattcaagaactggatgtatctggaattctggctacacaa
atctacacctgggtagatgatgaaatagaacttgagacaaaagggtctgatgatttcttg
gttatacatgctcgtgatgatctagcatctgtgcaaggtactacaccatatacacacagt
aatcctggaactccaatcaatatgccttggcttggtagcacacagactggcagaggggca
tctgtgatgattaagaaaactattaataatgtcagaagaatggcttcacatccaacacta
ccttattatttgactggagcccaagatggaagtgtcagaatgtttgagtggggtcattct
caacaaataacctgttttcggtctggcggcaattcaagagtgacaagaatgagatttaac
catcagggaaacaagtttggaatcgttgatgctgatggatatataagtttgtatcagacc
aactggaagtgttgtccagttactggaaacactcctaagccatatttgacatggcaatgt
cataacaaaacagccaatgattttgttttcattagctcctcttctctgatagccacagca
ggtctttcaactgataacagaaatatatgtttgtgggatactcttgtggcacctgcaaat
agcttggttcatccttttacctgccatgatagtggtgctacagtgcttgcatatgctcca
aaacatcaggtgttactatcaggaggcagaaaaggttttacctcggtatttgatcttcgc
caacggcaacagagacaatttttccaaagccatgactctccagtaaaagcaattgctgta
gatccaactgaagaatactttgtcacaggatctgcagaaggcaatataaagatctggagc
ctgtctacctttaatcttcttcatacttttataaatgaacatgctcggcaatccattttc
agaaacattggaactggtgtaatgcaaattgagacaggacctgccaatcacattttctct
tgtggagctgatggaacagtgaagatgagaatcttacctgatcgatttagttcattaagt
gaaatgttaaaaaatgatgtgaaattcatgctctag
DBGET
integrated database retrieval system
