KEGG   Sarcophilus harrisii (Tasmanian devil): 100921787
Entry
100921787         CDS       T02286                                 
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X4
  KO
K14409  protein SMG7
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100921787 (SMG7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100921787 (SMG7)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     100921787 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100921787 (SMG7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 100921787
NCBI-ProteinID: XP_012403177
Ensembl: ENSSHAG00000013147
LinkDB
Position
4:72393256..72484329
AA seq 1160 aa
MYEHLEDFPSLEKPYSTWTFMLQILHYGGEQLWQAEVLKADMTDSKLGPAEVWTSRQALQ
DLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEA
ASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVH
LGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKF
PFPAASTNLQKALSKALESRDEVKTRWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLE
EQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFIS
FLGILCKCPLQNEYQEESCSAYPLPAVKVSMDWLKLRPSVFQEAVVDERQYIWPWLISLL
NSFQPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQWRIRQQ
RLISIGKWIADNQPRLIQCENEVGKLLFITEIPELLLEDSSEAKENLVLQEASLVESLPV
EGSPGLKSVLSTGRSVSTNCDTTEKPMVTFKENIKPREVNREQGRSYPPKEVRRDYSKGI
AVTKSDGKKDNNKRKNETKKCTLEKLQETGKQSVAVQVKSQTELRKTPVSEARKTPVTQT
PSQASNSQFIPIHHPGAFPPLPSRPGFPPPAYVIPPPVAFPMGSGYTFPAGVSVPGTYLQ
PTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQSLSSLPAQPTAQSSG
QLQVQALAQQQQSPTKAVQALGKSPPHHSGFQQYQADASKQLWNPPQVQGPLGKIMPVKQ
PYYLQTQDSLKLFEPSLQPPVMQQQPLEKKMKPFTMEPYNQNSSEVKVPEFYWDPSYNMA
DNRAVMTQQANVDRRSKRPPGVFPSEQDPVPRMPFEKSLLEKPSELMSHSSSFLSLTGFS
LNQERYPNSSMFNEVYGKNLSTSGKAEVNPSMTHQETSLYSLFEGTPWSPSLPASSDHST
PASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRIADRWKTDKPAMGGFGF
DYLPATSSASETSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQ
LLMQQKQKQQRGQGTLNPPH
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgtatgagcatctggaggacttcccgtctctagagaaaccttattcaacttggactttt
atgttgcaaatcctccactatggtggtgaacaactttggcaggcagaagtcctgaaggct
gacatgacagattccaagctgggtccagctgaggtctggacatctaggcaggctctgcag
gacctgtaccagaaaatgctagttactgatctggagtatgctttagacaagaaagtggaa
caggatctctggaatcatgcctttaagaatcagatcacaacactacagggccaggcaaag
aatcgagcaaatcctaatcggagtgaagttcaagcaaatctttctctgtttttagaggca
gctagtggcttctatactcagttgttacaggagctgtgcacagtatttaatgtagattta
ccttgccgtgtgaagtcttcccagttgggaattatcagcaataaacagacgcataccagc
gccatagtgaagccacagtctagctcctgctcatatatctgccagcactgcctcgttcac
cttggagacattgcccgctatagaaaccagaccagccaggcagagtcctactataggcat
gcagctcagcttgtcccctccaatggtcagccttacaatcaattggctattttagcttct
tccaaaggagaccatctgaccacaattttctactactgcagaagcattgctgtgaagttt
cctttcccagctgcctccactaatcttcaaaaagcactttctaaagcactggaaagccgg
gatgaggtgaaaactagatggggtgtttctgacttcatcaaagcctttattaaattccat
ggtcacgtgtatctgagcaagagtttagagaagctaagccctcttcgagagaaattggag
gaacagtttaagagattgctattccaaaaagcattcaactctcaacagctagttcacgtc
actgtcattaacctgtttcaacttcatcatctacgtgactttagcaatgaaactgaacaa
cacagttatagccaggatgagcaactgtgttggacgcagctattggccctctttatctct
tttcttggcatcctgtgcaagtgccctcttcagaatgagtatcaggaggaatcatgcagt
gcatatccccttcctgctgtcaaggtctcaatggactggctcaaacttagacccagtgtc
tttcaggaggctgtggttgatgaaagacagtacatttggccctggctgatctctcttcta
aacagcttccaaccccatgaagaagatctctccagcacaaatgctactccacttccagaa
gagtttgagctacagggattcttagcactaagaccttctttcaggaacttagatttctcc
aaaggccaccaagggattacaggagacaaagagggacaacagtggcgaattcgccaacaa
cgtttgatctccataggcaaatggattgctgataatcagccaaggctgattcaatgtgaa
aatgaggtagggaaattgttgtttatcacagagatcccagagttattactagaagattcc
agtgaagccaaagagaaccttgttcttcaagaagcatccctcgtggagtccctgcctgtg
gaagggagcccagggctaaaatccgtgctatctacgggcagaagtgtgagcaccaactgt
gacaccacggagaagcccatggtcaccttcaaggagaacattaagcctcgagaggtgaac
agagaacaaggaagaagctacccacccaaagaggtgagaagggactatagcaaaggcata
gcagttactaaaagtgatggaaagaaggacaacaacaagaggaaaaatgagaccaagaaa
tgcaccttagagaagttgcaggaaacgggaaagcagagtgtggcggtgcaggtaaaatct
caaactgaattaaggaagaccccagtgtctgaagctagaaaaacacctgtaactcagacc
ccaagtcaggcaagcaattcccagttcatccctatacatcacccaggagccttccctccc
cttcccagtcgaccagggttcccacccccagcatatgttatcccccctcctgtggcattc
cctatgggctcaggttacaccttcccagctggtgtttctgtcccaggaacctatcttcag
cctacagctcactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccaatgaaccagggacctcaacagtcacag
ccaccttctcaacaatccctttcatctttaccagctcagccaacagcacagtcttcaggc
caattgcaggtccaggccctggctcagcaacagcagtctcccacaaaggctgtgcaggct
ttggggaaaagccctcctcatcactctggattccaacagtatcaggcagatgcttccaaa
cagctgtggaatccacctcaggtccaaggtccgttagggaagatcatgcctgtgaagcag
ccctactacctgcagacccaagactccctgaaactgtttgagccgtccttgcaacctcct
gtaatgcaacagcagcctctagagaaaaaaatgaagcctttcaccatggagccatataac
cagaattcctccgaagtcaaagtcccagaattttactgggatcccagttacaacatggcc
gataaccgagcagtgatgacccagcaagccaatgtggaccgtcgcagcaaaaggcccccc
ggagtctttccttcggagcaggaccctgtgcccaggatgccattcgagaagtccctgttg
gagaaaccctcagagctcatgtctcattcttcttctttcctatccctcactggcttctct
ctcaatcaggaaagatacccaaatagcagcatgttcaatgaagtatatggtaaaaaccta
agtaccagtggaaaagcagaagttaatccctcaatgacccatcaagaaacatcattgtac
tctctctttgaagggacaccgtggtctccatcccttcctgccagttcagatcattcaaca
ccagccagccagtctcctcactcttctaacccgagtagtctgccaagttctcctccaaca
cacaaccataattctgttccattctccaattttggacccatcggaactccagataatagg
gataggaggattgcagatcgttggaaaacagataaaccagctatgggtggatttggcttt
gattatcttccagccacatcctcagcctctgagacaagctggcaccaggccagcactccg
agtggaacctggacaggccatggcccttctatggaggattcttccgctgttcttatggaa
agcttaaagtctatctggtccagttccatgatgcaccctggaccttccgccctggagcag
ctgttgatgcagcagaagcagaagcagcagcgtggacaaggcaccctgaacccgccgcac
tga

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