Sarcophilus harrisii (Tasmanian devil): 100921813
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Entry
100921813 CDS
T02286
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shr03016
]
100921813 (TRUB1)
Enzymes [BR:
shr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
100921813 (TRUB1)
Transfer RNA biogenesis [BR:
shr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100921813 (TRUB1)
Prokaryotic type
100921813 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
100921813
NCBI-ProteinID:
XP_031811776
Ensembl:
ENSSHAG00000009346
UniProt:
A0A7N4PU17
LinkDB
All DBs
Position
2:571397767..571427350
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AA seq
360 aa
AA seq
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MMAACKAVAVSATVATATERSEEAAKASTTGTAASAAASAKVAVQSAVGKTATGASATAM
AGAAGASRSAAAAKLLSLSGVFAVYKPKGPTSAELLNQLKEKLLAEAGMPPQDGNKRKKQ
ALKIGHGGTLDSAATGVLVVGIGKGTKMLTSMLSGSKKYIATGELGKATDTLDSTGKITE
EKPYDQIKQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKKGEVVEAKPARPVTV
YSLSLQKFQPPLFTLDVECGGGFYIRSLVSDIGKELSSCATVQELTRTKQGPFTLEEHAL
REDKWTIDGIAQSLEHCMPLLSVEPSVKKLKTEDSKVQAVSSEDKTISQVKEKDGVIGTS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgcctgcaaggcggtggcagtctcggcaacagtggcgacagcgacagaacgg
tccgaagaggcagcgaaagcatccaccacggggacggcggcgtcagcggcggcctccgcc
aaggtcgcggtacagtcggctgtggggaagacggcgacgggggcctccgccacggcgatg
gcgggggcagcgggggcctcccgctcggcggcggccgccaagctgctgtctctgagcggc
gttttcgccgtgtacaagcccaaaggccccacgtcggccgagctgctgaaccagctgaag
gagaaactcctggcagaagctggtatgcctcctcaagatggcaacaaaaggaagaaacag
gcattaaaaattggtcatggaggaactttggacagtgctgccacaggagttctggtggtt
ggaattggaaaaggaacaaaaatgttgaccagtatgttatcaggttccaagaagtatatt
gctactggagaattggggaaagctactgatacattggattcaacagggaaaattacagaa
gaaaaaccttacgatcagataaaacaagaagatattgaaggtattcttcagaaatttact
ggaaatataatgcaagtaccccctctctattctgctttaaagaaagatggacagagactt
tcaactttgatgaagaaaggtgaagtagtagaggcaaaacctgccagaccagtcacagtg
tatagcctctcccttcaaaaattccagccacctttatttacattagatgttgaatgtgga
ggaggtttttatatcagaagcttggtcagtgacattggcaaagaactctcttcctgtgcc
actgtgcaagaattgacccgaactaaacagggaccatttacactagaggaacatgccctt
cgtgaagacaaatggacaattgatggaatagcacaatccctagagcattgcatgcctctt
ctctcagtagaaccttctgttaaaaaattaaaaactgaagattccaaagtacaagctgtg
agctctgaagacaaaacaataagtcaggttaaggaaaaagatggagtgattggaacatct
taa
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