Sarcophilus harrisii (Tasmanian devil): 100921908
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Entry
100921908 CDS
T02286
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100921908 (GAPVD1)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100921908 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
100921908
NCBI-ProteinID:
XP_003757180
Ensembl:
ENSSHAG00000009639
LinkDB
All DBs
Position
2:449289370..449373390
Genome browser
AA seq
1459 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETYYGEFLNRLRENPRLIASSLVAGEKL
NQDNTQSVIHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGERGS
ERFRQKVQEMVDLNESKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLDVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRGKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYMTYSQLITLVGF
MKNVMLGDQLREDRMALENLLANLPQPKPGKSNSLEMTSYNTPQLSPATTPANKKNRLPL
ATRSRSRTNMLIDQHPDHDGFPQETIPEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDETKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDEVVHGAHQLTSPPSQSESLLAMFDPLASHEGASAV
VRPKVHYARPSHPPPDPPILEGAMGGNEARLPGFGSHVLIPTDAEAFKQRHSYPERLVRS
RSSDIVSSARRPMSDPSWNRRPGNEERELLPSGAIGSPLVAAPPSSSSSPSKDSLRGETE
ERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDDPAPR
LSAQTQVAEDILDKYRNAIKRTSPGEGAVGNYEGAEVMGDGESIHDSPRDEALQNISADD
LPDSASQAAPPQDSPFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEIV
CFLKVQIAEAINLQDKNLMAQLQETIRCVGRFDNRTCRKLLASIAEDYRKRAPYIAYLTR
CRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAAD
DKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDIL
RDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILR
MCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESY
WWMQFTAAVEFIKTIDDRK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagttggatattcacactttggctcatcacctgaagcaggaacgactctatgtg
aattcagagaaacaattgatccagaggctaaatgcagatgtacttaagactgctgagaag
ttgtaccgcacagcatggattgccaagcagcagaggatcaacttggatcggcttatcata
acaagtgctgaagcttcccctgctgaatgttgccagcatgccaagatcttggaagataca
cagtttgtcgatggatataaacagctgggatttcaagagacttattatggagaattctta
aataggttaagggaaaacccacgactcattgcttcttctttggttgctggagagaaactg
aaccaggataacactcaaagtgttatccatacagtttttacctctctctatggcaactgt
atcatgcaagaagatgagagctacctccttcaggttttgagatatctgattgaatttgaa
ctcaaagaaagtgacaatcctaggcgtcttttaaggagaggcacttgtgcattcagcatt
ttattcaagttattttctgaaggactcttttctgccaaactcttcctcacagcaacatta
catgagccaatcatgcagttgctggttgaagatgaagaccatctggaaacagatccaaat
aaattgattgagaggttctctccttcccagcaggaaaagctttttggagagagagggtca
gagagattcagacaaaaagttcaagagatggtagacttgaatgaatccaaactggtggcc
ttggtgaacaaatttataggctatctcaaacagaacacatactgctttccccatagtttg
cggtggattgtatcacaaatgtataagacactttcttgtgtagacaggcttgatgtagga
gaagtaagagcaatgtgtactgatctcctcttggcttgcttcatttgccctgcaattgtc
aatccagaacagtatggaataatttctgatgctcccataaatgaggtggcaagatttaat
ttgatgcaggttggccgccttttgcagcagctagcaatgactggctctgaggagggagat
cctcgaggaaaaagcagccttggtaaatttgacaaaagttgtgttgctgccttccttgat
gttgtaattggtggtcgggcagtggagactcctccaatgtcttcagttaatcttctagag
gggttgagtagaactgtagtgtatatgacctacagccagctcatcactctggttggtttt
atgaagaatgtcatgttgggtgaccaactgagagaagatagaatggctcttgaaaacttg
ttggcaaatcttccccaacctaagccaggaaaaagtaacagtttggaaatgacttcgtat
aatacgcctcagttgtctcctgcgactactccagctaataaaaaaaatcgcttgccatta
gcaactcggagcagaagtcgtactaatatgctaattgaccagcatccagaccatgatgga
tttccccaagagacaattccggaagtgcagccagaagaagtattggtcatttctttgggg
acaggtccacagcttactccaggcatgatgtcagaaaatgaggtcttaaacatgcagctc
tcagatggtggacaaggagatgtccctgttgatgaaaccaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgttctaattctgtatcttctctggacctggaaggagaatctgtgtcagaacttgga
gcaggaccttctgggagtaatggagttgaagctctacagcttttggaacatgaacaagct
acaacacaagataacctcgatgataaactacggaaatttgaaattcgtgatatgatgggg
ctaacagatgatcgggatatttcagaaacagtgagtgagacctggagcacagatgtcttg
ggcagtgattttgatcccaacattgatgaagatcgattacaagagattgcaggtgcggca
gcagagaacatgttaggcagtttgctgtgtctgccaggttcaggatcagtgcttcttgac
ccctgcactggttctaccatatcagaaacaaccagcgaagcttggagtgtagaggtatta
ccaagtgactcagaggccccagatctcaaacaggaagagagattacaagagttagagagc
tgttctggactgggcagcacctctgatgatacagatgtccgggaagtcagttcccgccct
agcactccaggcctcagtgttgtctcaggcatcagtgcaacttctgaggatattcctaat
aagattgaggaccttaggtctgaatgtagttcagactttggtggcaaagattcagttact
agtccagatatggatgaagtagtccatggagcccaccagctgacttctcctccttctcaa
tcagagtctctgcttgcaatgtttgacccattagcttcacatgaaggggcttctgctgta
gtaaggccaaaagttcactatgctagaccatcacacccaccacctgatcctccaatcctg
gaaggagccatgggaggaaatgaagccaggctaccaggctttggctctcatgtattgatt
ccaacggatgcagaggcattcaaacagagacattcctatcctgagcgattagtccgcagc
aggagttctgatattgtgtcttctgcccggagacccatgagtgatcctagttggaatcgg
cgtcctgggaatgaagagagagaactacttccttcaggtgccattggatctcctttagtg
gctgcacctccatcttcatcttcatctcctagtaaagattccttgagaggagagactgaa
gaacgaaaagatagtgatgatgagaagtcagacagaaacaaaccttggtggagaaaacgt
tttgtttcagctatgcctaaagctcctataccatttagaaagaaagaaaaacaagaaaaa
gacaaagatgatctggggcctgacagattctcaacacttacagatgatcctgctcccagg
ctcagtgcacagacccaggttgctgaggatatcttggataaatataggaatgccattaaa
cgaactagtcctggtgaaggagctgtggggaactatgaaggtgcagaagttatgggggat
ggtgaaagtatacatgactctcctcgggatgaagccctgcagaatatctctgcggatgat
cttccggattcggccagccaggcggcacccccacaagactcccctttctcttacagggat
gccaaaaagaaactgaggcttgcactttgctcggcagattctgttgctttcccagtgctg
actcattcaacaaggaatggtctaccggatcacacagacccagaagacaatgaaattgta
tgcttcctaaaagttcagatagctgaagcaattaatttacaagacaagaacttaatggct
caacttcaagaaacaattcgctgtgtgggtcgctttgataatagaacttgtcgaaaactg
ctggcatctattgcagaagactaccggaaaagggctccatatattgcttatctcacccgt
tgtcgccagggtctacagactacacaggcccatctagaaagactgctgcagagagttttg
cgagacaaagaggtggctaaccgatattttaccacagtttgtgtgagattattgctggag
agcaaagagaagaagattcgggaattcattcaagactttcagaagctcacagcagctgat
gataagacagctcaggtagaagatttcctgcagtttttatatggtgccatggctcaggat
gtcatctggcagaatgctagtgaggagcagctccaagatgctcagatggcaattgagcga
agtgtgatgaaccgaattttcaagctcgccttctatcctaaccaagatggagacattctt
cgtgaccaggttcttcatgaacatatccagagattgtctaaagtagtgactgcaaatcat
aaagcacttcagatacctgaggtctatcttcgggaggcaccatggccatctgcacaatct
gaaatccgcacaataagtgcttataagactcccagggacaaagtacagtgcatcctgaga
atgtgctccacaattatgaacttgctaagtctggccaatgaagattcagtccctggagca
gatgattttgttcctgttctggtgtttgttttgataaaggcaaacccgccctgtttactg
tctactgttcagtacatcagtagcttttatgctaactgtctatctggagaagaatcatat
tggtggatgcaattcacagcagcagttgaattcattaaaaccattgatgaccggaagtga
DBGET
integrated database retrieval system
