Sarcophilus harrisii (Tasmanian devil): 100921943
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Entry
100921943 CDS
T02286
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecule (CAM) interaction
shr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100921943 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100921943 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shr00535
]
100921943 (SDC3)
Proteoglycans [BR:
shr00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
100921943 (SDC3)
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Ortholog
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GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
100921943
NCBI-ProteinID:
XP_031818259
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All DBs
Position
3:551646149..551718708
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AA seq
428 aa
AA seq
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MLLPPLLLLLLAGRAAGAQRWRSENFERPVDLEGSGDDDSFPDDELDDHYSGSGSGYFEQ
ESGIEKAVRISTNVAVALSTTPAVLPTSAIQPMGTPFEMQPSESPTPKPATAVLAVTKVS
LVPTAAATTATVATAMEAVTTVAPAVATEAPAVATEAPAVATVPVATTNIVPTTASIPTY
PPSTVSVPVSHTTALPKLPPPPPATVAATAQATAQATAPATLTLSTVASDLDTEASTPKL
VVTATPSTLPKPEASQPPGGFEKSTVALGSDALVPTEVPQTPTPETPLATNREVEAEVPF
PSGDSEPPEEGITQPELDNEVVAVGEKTTTTSAGIRPKDDQSGPDLFDNTIDLGNSAAQL
PQKNILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYTLEEPKQASVTYQKP
DKQEEFYA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccgccgttgctgctgctgctcttggcgggacgcgccgccggggctcagcga
tggcgcagtgaaaactttgagaggccagtggacctggagggatctggggatgatgactcc
ttcccagatgatgagctagatgaccattattcgggctctggctctggctactttgagcag
gagtctgggattgaaaaggctgtgcggataagtaccaatgtggctgttgctctgtccacc
acaccagcagtgctgcccaccagtgccatccagcccatgggcaccccctttgagatgcaa
ccgtcagagagccccactcccaagcctgccaccgctgttttggcagtgaccaaggtgtca
ctagtgcccactgctgctgccaccactgccaccgtggccacagccatggaagctgtgacc
accgtggccccagccgtggccaccgaggctccggctgtggccaccgaggccccggccgtg
gccaccgtgcctgttgccaccaccaacatcgtcccaacaaccgctagcatccccacatac
cccccatccacagtcagtgtgccagtttctcacacaacggccctcccaaagctcccacct
cctcccccagccacggtggctgccacagcccaggccacagcccaggccacggcacctgcc
acactcaccctctctacagtggcttctgacctggacacagaggcatccaccccgaagctg
gtggtcactgccacaccgagtaccttgccgaagccagaggcctctcagcctccggggggc
tttgagaagagcaccgtagctctgggatctgatgccctcgtgcccacagaggtgccacag
acccctactccagagaccccactggctacaaaccgggaagtggaggcggaggtaccattc
cccagtggggactcggagccccctgaggaggggatcactcagccagagctggacaatgaa
gtggtggccgtgggtgaaaagaccaccacgacctcagcaggaataaggcccaaggatgac
cagtctgggccagacttgtttgataacaccattgatttgggcaactcagcagcccagctg
cctcagaagaatatccttgagaggaaggaagtgctagtagcggtgattgtggggggggtg
gtcggagccctctttgctgcctttctggtcaccctcctcatctatcgcatgaagaaaaag
gatgaagggagctacaccttggaggagccgaagcaggccagcgtcacataccagaagccg
gacaaacaggaggaattctatgcctag
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