KEGG   Sarcophilus harrisii (Tasmanian devil): 100921959
Entry
100921959         CDS       T02286                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013  Nucleocytoplasmic transport
shr03015  mRNA surveillance pathway
shr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100921959
  09122 Translation
   03013 Nucleocytoplasmic transport
    100921959
   03015 mRNA surveillance pathway
    100921959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100921959
   03041 Spliceosome [BR:shr03041]
    100921959
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     100921959
Spliceosome [BR:shr03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    100921959
SSDB
Motif
Pfam: RRM_1 RRM_occluded Flg_new
Other DBs
NCBI-GeneID: 100921959
NCBI-ProteinID: XP_012404904
Ensembl: ENSSHAG00000012279
LinkDB
Position
4:132107366..132108609
AA seq 156 aa
MSGGLLSALQSDSYVELGWYRDQHFRGKMDDQEKLLKKSCTLYVGNLSFYTTEEQIYELF
SKSGDIKKIIMGLDKVKKTACGFCFVEYYCRADAENAMRYINGTRLDDRIIRTDWDAGFR
EGRQYGRGRSGGQVRDEYRQDYDAGRGGYGKIVQNQ
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtcggggggactcctgagcgcgctgcagagcgattcctacgtggagctgggctggtac
cgcgaccagcacttccgagggaaaatggacgaccaagaaaagttgttaaagaaaagctgc
actctgtacgtgggcaacctgtccttttacaccacggaggagcagatctacgaactcttc
agcaaaagcggcgacatcaagaagatcatcatgggcctggacaaagtgaagaagacggcg
tgcggcttctgcttcgtggagtactactgccgcgccgacgccgaaaacgccatgcgctac
atcaacggcacccgcctggacgaccgcatcatccgcacggactgggacgcgggcttccgg
gaaggccggcagtacgggcgcgggcggtccgggggccaggtgcgcgacgagtaccggcag
gactatgatgccgggcgggggggctacgggaaaatcgtgcagaaccagtga

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