Sarcophilus harrisii (Tasmanian devil): 100922002
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Entry
100922002 CDS
T02286
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100922002 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100922002 (VPS35)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
100922002 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
Imm5
ADIP
Motif
Other DBs
NCBI-GeneID:
100922002
NCBI-ProteinID:
XP_003757260
Ensembl:
ENSSHAG00000003156
UniProt:
G3VK89
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All DBs
Position
2:complement(462421570..462457579)
Genome browser
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDAIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQFLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacaacagtcaccgcaggatgagcaggaaaagctcctagatgaagctatt
caggcggtgaaggttcaatcattccagatgaaacgatgtctggacaaaaacaagcttatg
gatgctctgaaacatgcctctaacatgcttggtgaacttcgaacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaactgcactatttggaggtctac
ttgacagatgaatttgccaaaggaaggaaagtagcagatctttatgaacttgtacagtac
gctggaaatattatcccaagactctacctacttattacagtgggagttgtttatgtcaag
tcatttcctcagtccagaaaagatattttaaaagatttggtagaaatgtgccgtggtgtt
cagcatcccttaagaggtctgtttcttcgaaattaccttcttcagtgtaccagaaacatt
ttgccagatgaaggagagccaacagatgaagaaacaactggagacatcagtgattctatg
gattttgtactactaaactttgcagaaatgaacaagctctgggtgcgaatgcagcatcaa
ggacatagccgggatagagagaaacgagaacgggaaagacaggaacttagaattctagtg
ggaacaaatttggtccgcctcagtcagttggaaggtgtaaacgtggagcgatacaaacag
attgttttgactggtattttggaacaagttgtgaattgtagggatgccttggctcaagag
tatctcatggagtgtatcattcaggtcttccctgatgaatttcatctacagactttgaac
ccttttcttcgagcctgtgctgagttacatcaaaatgtaaatgtgaaaaacataatcatt
gctttaattgatagattagctttatttgctcaccgtgaagatggacctggaatcccagca
gatattaaactttttgacatattttcacaacaagtggctactgtaatacagtccagacaa
gacatgccttcagaagatgtggtgtctttacaagtatctctcattaatcttgccatgaag
tgctatccagatcgtgtggattatgttgataaagtattagaaacaacggtggaaatattt
aataagctaaatctagaacatattgctaccagcagtgcagtttcaaaggagcttacaagg
ctgttgaagatacctgttgacacctataacaacattttaacagttttgaagttaaaacat
tttcatcccctctttgagtattttgactacgagtccagaaagagtatgagttgttatgtg
cttagtaatgtcctggattataacaccgaaattgtttcacaagaccaggtggatgcaatc
atgaatttagtatcaacattgattcaagaccaaccagatcaacctgtagaagacccagac
cctgaagactttgctgatgagcagagccttgtggggaggttcattcatcttctgcgatca
gatgatcctgatcagcaattcttgattttaaatacagcacggaaacattttggagctggt
gggaaccagcgcattcgttttaccctccctcccttagtatttgcagcatatcaactggct
tttcgctataaagaaaattccaaagtggatgataagtgggaaaagaaatgccagaaaatc
ttttcctttgcacatcagactatcagtgctttaatcaaagcagaattggcagagctgcct
ctacgacttttccttcaaggagctctagctgctggggaaattggttttgaaaaccatgaa
acagtggcatatgaatttatgtctcaggcattttctctgtatgaagatgaaatcagtgat
tctaaagcccagctggctgccatcaccttgatcattggaacatttgagaggatgaagtgc
ttcagtgaagagaaccatgagcctttaaggactcagtgcgccttggcagcttccaaactg
ctcaagaagccagaccagggccgggctgtgagtacatgtgcccatctcttctggtctggc
agaaacacagacaagaatggagaagagcttcatggaggcaagagagtaatggaatgccta
aagaaggctttgaagatagcaaatcagtgcatggatccctcgctacaagttcagcttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtgacaatt
caggttttaaatcaacttatccagaagatacgagaagaccttccaaatcttgagtccagt
gaagaaacagaacagattaacaaacattttcataataccttggagcatttgcgcttgagg
agggaatcaccagagtctgaggggccaatttatgaaggtcttgtcctttaa
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integrated database retrieval system
