Sarcophilus harrisii (Tasmanian devil): 100922167
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Entry
100922167 CDS
T02286
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100922167
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100922167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100922167
NCBI-ProteinID:
XP_003756713
Ensembl:
ENSSHAG00000008675
LinkDB
All DBs
Position
2:374031265..374034312
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AA seq
792 aa
AA seq
DB search
MTLKRKAILRQRQVLFLVFLLWVSEASCELGRFLVAEETEKGSFVANVATVLGLELGNLS
ARGARISSRGNKQILQLRGENGDLVLKDKLDREELCGSAEPCLLPFQILLENPFKIFRAE
LLVGDINDHSPVFLEPEMLLKIPENSIPGTVLPLKNAEDLDVGSNAVQNYTISPNSHFHV
QTHSRSEGRKFPELVLIKTLDREEQPEFTLILTAIDGGSPPRSGTTRVRIAVLDINDNAP
IFTQPQYEVRIPENNSIGSLVVTISAEDLDTGKNAEILYSLFHSSEEIIKTFEVNPISGD
IRLRKKLDFETIQRYEVDIEGTDGGGLSGKCTVIVHVIDLNDNAPELTMSSLTNPIPENA
PETVVAVFSISDLDSGENGRLVCSIQEDIPFILQPSIENFYALVTEGALDRENKAQYNVM
ITVTDLGFPRLKSEYNITVFISDVNDNPPVFTQTEYTLYLKENNSPAFHLGSVSANDRDS
GTNAKVTYSLQPPGLENFSLFSYISINSDNGHLYALRSLDYEIIPTFQFSVKATDGGLPA
LSSQVLVQVVVLDENDNSPLVLYPLQNGTVSYNDLVPRAAEPGYLVTKVVAVDEDSGQNS
WLSYQLLKATDPGLFTVWSHNGEVRTVRPISDRDAIKQKLLVLVKDNGQPPLSTAVTLNV
LLVDGFSEPYIKLPGSSKEPAQTDSLTLYLVISLASISFLFLFFIIVFTVLHLWRRKRDS
SDSSHFESNGPFPGHLVDASGTGTLSHSYQYEACLNSGSGTSEFKFLKPIIPSLPAHNDG
KDLEERNNLDFN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgactctcaaaaggaaagcaattctacggcaaaggcaagttctatttcttgtttttttg
ctgtgggtgtcagaagccagttgcgagctggggaggtttttggtggcggaggaaactgag
aaaggctcttttgtggcaaatgtagcaacggtcttggggttagagttaggaaatctgtca
gccagaggggcccgaatatcttctagaggaaataagcagattttgcagctcaggggtgag
aatggagatttggtcctaaaagacaaactggaccgggaggagctgtgcggctccgctgag
ccctgtctgctgcctttccagattttactggaaaaccctttcaagatatttcgggctgag
cttctggtaggagacattaatgaccattcgcccgtgttcctagaaccagaaatgctcctg
aaaatcccggaaaatagtattcctggtactgttttgcctctgaaaaatgctgaagatttg
gatgtaggaagtaacgcagtgcagaattatactatcagccctaattcccatttccacgtt
caaactcacagtcgtagtgagggcaggaagttcccagagctggtgttgatcaaaactctg
gatcgtgaggagcagccggaattcacattaatcctcacagccatagatggtgggtccccg
cccaggtctggaacgactcgcgttcgcatagcagttttggacattaatgataatgctccc
atatttactcaacctcaatatgaggttcggatccctgaaaacaattccatcggttcgttg
gtcgtcaccatctctgctgaagacttggacactggaaaaaacgcagaaatactgtattcc
ctttttcatagttctgaggaaattatcaaaacttttgaagtaaatcccatctcaggagat
attcgactcagaaaaaaactagattttgagacaattcaacggtatgaagtagatattgaa
ggaactgatggtggtggcctttccggaaaatgcactgtcattgttcatgtgatagatctg
aacgacaatgctccagaactgaccatgtcatcacttaccaatcctatcccagagaatgca
cctgagactgtggtggctgttttcagtatttccgatttggactcaggagaaaacggaagg
ctggtttgctccattcaagaagacatcccctttattttgcaaccttccatagaaaatttt
tatgccttagtaacagaaggagccctggacagagagaataaggcccaatataatgttatg
attactgtcacggatttggggttcccgaggctcaaatcagaatataacatcacagtgttt
atctctgacgttaatgacaacccaccagtatttactcaaacagaatatactctctatctc
aaggagaacaacagtcctgccttccatcttggcagtgtcagtgccaatgacagggactca
gggactaatgccaaagtcacctattctttgcagcctccagggcttgagaatttctccctc
ttttcctacatctccattaattcagacaacggacatctctatgctctgagatctctggat
tatgaaatcatcccaactttccagttctctgtaaaggcaactgatggaggcttgccagcc
ctgagcagtcaggttctagttcaggttgtggtcttagatgagaatgacaactctccctta
gtgctatatccactgcagaatggcacagtatcctataatgacctggtgccaagggcagca
gaaccaggttacttagtcaccaaagtggtggctgtggatgaagactcaggccaaaattcc
tggctttcctaccagcttctcaaagccacagatccaggactcttcactgtgtggtcccat
aatggagaagtacgaacagtgaggcccatcagtgacagagatgccatcaagcagaagctt
ctggttctggtgaaggacaatgggcaaccacctctgtccacagcagtcacgctgaatgta
ctcctggtggatggattctctgagccatatataaagctcccaggatcttccaaggagcca
gcacagactgattctcttactctctacttggtcatttctttagcttctatctcttttctc
ttcttattttttatcattgtgttcactgtgctgcacctatggaggaggaaaagagattct
tcagacagcagccactttgagtccaatggtcccttcccaggccatttggtggatgccagt
ggcactgggaccttgtcccatagctaccaatatgaagcatgtcttaacagtggttctggg
actagtgaatttaagttcttgaagccaattattcccagtctccctgctcacaatgatgga
aaggatttggaggaaaggaataatttagacttcaattaa
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