Sarcophilus harrisii (Tasmanian devil): 100922307
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Entry
100922307 CDS
T02286
Symbol
PODN
Name
(RefSeq) podocan
KO
K25037
podocan
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shr00535
]
100922307 (PODN)
Proteoglycans [BR:
shr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
100922307 (PODN)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_6
LRRNT
Toxin_11
Motif
Other DBs
NCBI-GeneID:
100922307
NCBI-ProteinID:
XP_031824957
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Position
4:complement(23406693..23448328)
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AA seq
632 aa
AA seq
DB search
MSSIWHSSERGFSSPLSCDWEAMVPSRTFLLVLWAWAWGPHGAHGQTHEDNEFLEDPILF
LRPEPGQGSLDCPRECVCTQEGVVDCGGIDLREFPGDLPEYTNHLSLQNNQLEKIYPDEL
SRLHRLETLNLQNNRLTSRGLPEEAFKQLTNLNYLYLANNKLTWPRFPAQPWSAEPPTSY
QIPGATFGQKPNLRRGRGPPPGSVYLHNNKLADAGLPDNMFNGSSNVEILIMSSNFLKRK
MRARPPALLGTAPPHAAPSPQNNKLEKIPAGAFSELTSLRELYLQNNYLTNEGMDNETFW
KLSSLEYLDLSSNNLSEIPAGLPRNIVLLHLEKNAIRSVGPDVLTQIRNLEYLLLHSNKL
KAKGIHPLAFQGLKKLHTVHLYNNVLERVPGGLPRRVRTLMILHNQISGIARNDFATTYF
LEELNLSYNKITSPQVHRDAFRKLRLLKSLDLSGNLLQTLPLGLPKNVQVLKLKSNYLGA
VARGALAGMAQLRELYLTNNRLRSRAVPPRTWADLASLQLLNMAGNQLTEIPEGLPESLE
YLYLQNNMISSVSENAFESTPNLKGIFLRFNKLAVGAVKESTFKGLAHLQVLDIEGNFEL
GEGSKNRRRPEEEEEEEEEEEGEEEEEDEEMR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaatatggcacagctcggagagagggttttcttcccctctgtcttgtgattgg
gaggcaatggtcccaagcaggacattcctgctggtgctctgggcctgggcctgggggccc
cacggtgctcacggtcagacccacgaagacaacgaattcctggaggatcccatccttttt
ctgaggccggagccgggccaggggagcctcgactgcccccgggagtgtgtgtgcacacag
gagggggtggtggactgtggagggattgacctcagggagttccctggagaccttcccgag
tacaccaatcacctgtccttgcagaataaccagttggagaaaatctaccccgatgagctt
tcacgactccacaggctagagaccctcaaccttcagaataaccggctgacgtcccgaggg
ctcccagaggaagcttttaagcagctcacaaacctgaactacctgtacctggccaacaat
aagctgacctggcccaggtttcctgcccagccctggtcagccgaaccgccaacttcctac
cagatccctggggccaccttcggccagaagccaaacttgaggcgagggagggggcccccc
cccgggtccgtctacctgcacaataacaagctggccgacgccgggctcccggacaacatg
ttcaacggctccagcaacgtggagatcctcatcatgtccagtaacttcctcaaacggaaa
atgcgcgcccggcctccggcccttctcgggactgccccccctcacgccgccccctccccc
cagaataacaagctggagaagatcccggccggggctttcagcgagctcaccagcctccgg
gagctctacctgcagaacaactacctgaccaacgaaggcatggacaacgagaccttctgg
aagctctcgagcctcgagtaccttgacctgtccagcaacaacctgtcggaaatccccgcg
gggctgccccgcaacatcgtgcttctgcacctggagaagaacgccatccgcagcgtgggg
cccgacgtgctgacccagatccgcaacctggagtacctgctgctgcacagcaataagctc
aaggccaaaggcatccacccactggccttccagggcctgaagaagctgcacacggtgcac
ctgtacaacaacgtcctggagcgggtgccgggcgggctcccccgcagggtcaggaccctc
atgatcctgcacaaccagatctctggcattgcccgcaacgacttcgccaccacctacttc
ctggaggagctcaacctcagctacaacaagatcaccagcccccaggtgcaccgtgacgcc
ttccgcaagctgcggctgctcaagtccctggacctctcggggaacctgctgcagacgctg
cccctgggcctccccaagaacgtgcaggtgctcaagctgaagagcaactacctgggagct
gtggctcgcggggccctggccggcatggcccagctgcgcgagctctacctcaccaacaac
cgcctcaggagccgggcggtgccgccgcggacttgggccgacctcgccagcctccagctg
ctcaacatggccgggaaccagctcacagagatcccagaggggctgcccgagtccctggag
tacctctacctacagaacaacatgattagctccgtgtctgaaaatgcctttgagtcgacc
cccaatctcaaggggatctttctcaggtttaacaagctggctgtgggagccgtgaaggaa
agcaccttcaaagggctggcgcacctgcaggtgctggacatcgagggcaactttgaactg
ggcgaggggtccaagaatcgcaggcgcccagaagaggaggaagaggaggaggaggaagag
gaaggcgaggaggaggaggaagatgaggaaatgagatag
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