Sarcophilus harrisii (Tasmanian devil): 100922359
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Entry
100922359 CDS
T02286
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03015
mRNA surveillance pathway
shr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100922359 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100922359 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100922359 (CPSF4)
03019 Messenger RNA biogenesis [BR:
shr03019
]
100922359 (CPSF4)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100922359 (CPSF4)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100922359 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
100922359
NCBI-ProteinID:
XP_003761614
Ensembl:
ENSSHAG00000011533
LinkDB
All DBs
Position
1:complement(254940748..254955109)
Genome browser
AA seq
269 aa
AA seq
DB search
MQELIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPQAKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNNVGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgcgagcgtggaccacatcaagttcgacctggagatcgcggtggag
cagcaacttggggcgcagccgctgcccttccccggcatggacaagtcgggggctgctgtc
tgtgaattttttttgaaggccgcctgtggaaaaggggggatgtgcccgttccgtcatatt
agtggcgagaagactgttgtgtgcaaacactggcttcgaggactgtgcaagaaaggagac
caatgcgaattcctgcatgagtatgatatgaccaagatgcctgagtgttacttctactcc
aaattcggggaatgcagtaacaaagaatgtccctttcttcacattgatccggaatccaag
atcaaagattgtccttggtatgaccgaggcttctgcaaacatggtcctctctgcaggcac
aggcacaccaggagagtcatttgtgtgaattaccttgttggattctgtccagaagggcct
tcctgtaaattcatgcaccctcgatttgaattgcccatggggaccacagaacagccacct
ctgcctcaacagacacagcctcaggcaaagcaaaataacaatccaccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaatcagcagagaaccccgcaa
gtcattggggtcatgcagtctcaaaacaacaacgtggggaacaggggaccccggccgttg
gagcaggtcacctgttacaagtgtggcgaaaaaggacactatgccaacagatgcaccaaa
ggacacttggcttttctcagtggacaatga
DBGET
integrated database retrieval system
