Sarcophilus harrisii (Tasmanian devil): 100922423
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Entry
100922423 CDS
T02286
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100922423
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100922423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
100922423
NCBI-ProteinID:
XP_003756714
LinkDB
All DBs
Position
2:374035654..374038917
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AA seq
792 aa
AA seq
DB search
MAPAPREIIRQVLFVCIFIFGRFRVECETMHYSIPEETAIGSCVANFAKDLGLDVKALPS
RQARLVAAGNGEHFLLDPKTGELLTKDRIDREEICAQMDECIIRFELLLQNPLRFFRAEL
AISDINDHSPQFPEDEFILKIPESTPVGTRFPLESAQDLDAGENALQNYTLTPSNEPFVL
HTREQSDGSKYPELLLVKALDREEQPELEFILTAVDGGIPPTSGTAKVRVIVLDANDNAP
VFSQSLYQATVAENSPIGSEVTTVSAVDSDQGRNGEVTYSFSQNAGKGHRAFQIDSLTGE
IRVSKPLDFEMTEKYELSVRATDGGGLSSHCKVLVEVEDVNDNPPEVTVTSLSTLLPEDS
LPGTVVALFSVRDKDSGDHGRASCSIPDDIPFILKPIFSNYYELVTDAALDRERVSNYSI
MITAVDSGSPSLSTRETVTVQILDINDNLPRFNQSSYTMYVTENNSPFLMIGALSATDSD
SGQNAKVTYSIWPENNNSPFSSPFISINSENGQVYILKTLDYEEIKDFKVTVQASDSGTP
SLSTNVTVYIVIVDENDNAPIILYPIQNHSASYSELVPRSAEEDYLVTKVVAVDEDSGQN
SWLSYQLLKATDPGLFIVWSHNGEVRTSRSISDRDAIRQKLIILVRDNGIPVLSTLATLD
LLLVDGFSEAHMHVPDSTEEETHDDKLTVYLIISLALISFLFLVSISIFIVIKVYKKKQL
KERSHCFGHFDDANNIPRNLLDVTGTGTLFQAYKYDMCLTDGSSNSEFKFLKPIIPSFPS
QLENSEMFPQGN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagcaccgcgggaaataatcaggcaagttctctttgtttgtatttttatcttt
gggaggttccgcgtggagtgtgaaaccatgcactattctatacctgaagaaacagcgatc
ggctcctgcgtggctaattttgcaaaggacttgggtctggatgtgaaagcgttgccttct
cggcaggctcggctagttgcggctggtaatggggagcatttcctgttggacccgaaaaca
ggggaactgctcacaaaggacagaatagatcgggaagaaatatgtgcccagatggacgaa
tgcatcatccgttttgaattattgttgcaaaatccattgaggttcttccgggcagagtta
gctatttctgatatcaacgatcattcgcctcagttcccagaggatgaattcattttaaag
atccctgaatcgactcccgttggcactcgcttccccctggagagtgcccaggatttagat
gcaggggaaaatgcccttcagaactacacgctcactccatcaaatgagcccttcgttttg
cacactagggagcagagcgatggcagcaagtacccggagctgctcctggtaaaggccctg
gaccgcgaggagcaaccagaactcgagttcatactcaccgctgtggatggtggaatcccc
cccacctcggggaccgccaaggtccgtgtcattgtcttggatgcaaatgacaatgcccca
gtgttctctcagtctctgtaccaagctactgtggcagaaaacagtccaataggctcagaa
gtgactactgtatctgcagttgattcagaccaaggtcgtaatggagaagtgacttactcg
ttcagtcaaaatgcaggtaaaggtcatcgtgcttttcagatagactctctgacgggggaa
attcgagtctctaaacctctagactttgaaatgactgaaaaatatgaactaagtgttagg
gccaccgatggaggaggattatcctcgcattgtaaagtccttgtggaggtggaggatgtg
aatgacaacccccctgaagtgacagtgacatctctttccactctactccctgaagactct
ttacctggaacagtggtggccctttttagcgttcgtgacaaggactctggggaccacggg
agagcctcttgttccattccagatgacatccctttcatcctgaagccgattttcagcaat
tactatgaattagtgacagatgcagccttggatcgggaaagggtttccaattatagcata
atgatcactgccgtagactcgggatctcctagtctctcaactagggaaactgtcactgtg
caaatattagacatcaatgataatctccctcgttttaatcaatcgtcctatactatgtat
gtaactgagaataacagtcctttcctgatgattggagcgctaagcgctactgattcagat
tcggggcagaatgctaaagtgacatattctatctggcctgagaacaataattctcccttt
tcctccccattcatttctatcaattcagaaaatggacaagtctacattctgaagactctt
gattatgaagaaatcaaagacttcaaagtgaccgtgcaagcgtcggattcagggacccct
tccttgagcactaatgtcacggtatatatagtcatcgtggatgaaaatgacaatgcccca
attattttataccctattcagaaccactctgcttcttatagtgaactggtccctaggtcg
gctgaagaagattacttggttactaaagtggtggctgtggatgaggactcaggtcagaac
tcctggctttcctaccagttacttaaggcaaccgatcctgggttgttcattgtatggtct
cataatggagaagttcgaacttcgaggtccatcagcgacagagatgctatcaggcagaaa
ctcattattcttgtaagagacaatggcatcccagtactctctactcttgcaacactcgac
cttcttcttgtagatggcttttcagaagctcatatgcacgtcccagattctactgaagaa
gagacacatgatgacaaattaactgtgtacttgattatttcattggctttaatttctttt
ctctttctagtttctatttcaatctttatagttatcaaagtgtataagaagaaacagttg
aaggagcgatcccattgctttggccatttcgatgatgccaataatattccaagaaattta
ttggatgttactggcacagggactctctttcaggcatacaaatatgacatgtgtttaaca
gatggctctagtaatagtgaatttaaattcctcaaacctataatccccagctttccatct
cagttggagaatagcgaaatgttccctcaggggaattaa
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