Sarcophilus harrisii (Tasmanian devil): 100922588
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Entry
100922588 CDS
T02286
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04068
FoxO signaling pathway
shr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100922588 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
100922588 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100922588 (RAG1)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100922588 (RAG1)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100922588 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100922588
NCBI-ProteinID:
XP_031797794
Ensembl:
ENSSHAG00000014085
UniProt:
A0A7N4PGC1
LinkDB
All DBs
Position
6:222489289..222502075
Genome browser
AA seq
1047 aa
AA seq
DB search
MEIAVAPGRGLSSAPDEIQHPYMKFSEWKFKLFKVRSFIKPPPEEAQGPNKNLGEGQASL
EETPAVISSANIPAPEKPALIQPTFSALPKSLEKPADVGKTREKAIHLASLRQLCRICGV
SFRADGQNRRYPVHGPVDNKTQSLLRKKEKKVTSWPDLIAKVFKIDVKGDVDSIHPTQFC
HSCWNIMYGRFSNAPCEIHFPRKAAIEWRPHTPDCDSCQAARRGLKRKGHQSNLLLSKKL
KTVIKQTRRAHPSKSQVQPRNGGKDRMKKITNCSKMHLSTKLLAVDYPVDFVKAISCQIC
EHIVTDPVETTCRHVFCRTCILRCLKVMGSYCPSCQYPCFPTDVESPARSFVNILNSLLV
KCPVNDCDKEVSFEKYNQHISSHKEPKASYVYINKGGRPRQHLLSLTRRAQKHRLRELKM
QVKAFADREEGGDLKAVCLTLFLLVLRARNEHRQADELEAIMKGRGSGLQAAVCLAIRVN
TFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKTLLPGYHPFEWKPPLKNVSARADVG
IIDGLSGWAASVDDYPVDTIAKRFRYDAALVSALMDMEEDILEGMKSQGLGDYLSGPFTV
VVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMNITITQDQESVRIFEESKPNSELCCK
PLCLMLADESDHETLTAILSPLIAEREAMKSSELLLEMGGIPRTFKFIFRGTGYDEKLVR
EVEGLEASGSVYICTLCDATRLEASQNLVLHSITRSHAENLERYEVWRSNPYQESAEELR
DRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKLFQLEIGEVYKNPNASKEERKRWQATL
DKHLRKKMNLKPIMRMNGNFARKLMTKETVEAVCELIHCEERHEALRELMDLYLKMKPVW
RSTCPAKECPESLCQYSFNSQRFAELLSTKFRYRYEGKITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNAVKNTG
LIINSQAEFEDSLGLEDSLEILNSMEF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagcagtggcaccaggtcgagggcttagctctgccccagatgaaatccagcac
ccgtatatgaaattttctgaatggaaattcaagctcttcaaagtgagatcctttattaag
ccccctcctgaagaagctcaggggccaaataagaacctgggagaaggccaggcgtctctg
gaagagaccccagcggtcataagcagcgccaatattccagcaccagaaaagccagccctg
atccagccaacattctcagcccttcccaagtctttggagaagcctgctgatgttggaaag
actcgggagaaggcaattcacctggccagcctgcggcagctttgccgtatctgtggtgtt
tcctttagagctgatggacagaataggagataccctgtccatggtccagtggacaataaa
actcagagcctccttcgaaagaaggagaagaaagtcacctcctggccagatctgatcgcg
aaggtttttaaaatcgatgtgaaaggggatgttgattccatccaccccactcagttttgc
cacagctgttggaatattatgtatgggaggttcagcaatgccccctgtgagatacacttc
ccaaggaaagctgccatagagtggcgtccacacaccccagactgtgacagctgccaggca
gcccgccggggactcaagaggaaaggccatcagtccaatctgttgctcagcaaaaagctc
aagaccgtgatcaaacagactcggagagcccatccttccaagagtcaagtccagcctcga
aatggtggcaaagatcggatgaagaagattaccaactgcagcaagatgcacttgagcact
aagctgctagctgtggactaccctgtggactttgtgaaggccatctcatgccagatctgt
gagcacattgtgaccgacccagtggaaaccacctgtaggcatgtattctgtagaacctgc
attttgaggtgcctcaaggtcatgggtagctattgcccttcttgccagtatccctgtttc
cctacagatgtggaaagcccggcgaggtcctttgtgaacatcctcaattccctgctggtg
aaatgtcctgtgaatgactgtgacaaggaagtcagctttgaaaaatacaaccagcacatc
tccagccacaaggaaccgaaagcttcctatgtgtacattaataaaggcggccgaccccgg
cagcatctgctgtccctcaccaggagggctcagaaacaccggctgagagaactgaagatg
caggtcaaggcttttgcagacagagaagaagggggtgatctgaaggcagtgtgcctgact
ttattcttgctggtactgagagcaaggaacgagcatcggcaagcggacgagcttgaggcc
attatgaagggcagaggctcgggcctccaggcagctgtgtgcttggccatcagggtcaac
acttttctgagttgtagccagtaccacaagatgtaccggactgtgaaagccatcactggg
aggcagatcttccagcccttgcatgcccttcgaaatgcagaaaagaccctcctgcctgga
tatcacccatttgagtggaagccccctctgaagaacgtctccgctcgcgcggacgtcggc
attattgacgggctttctggctgggctgcatctgtggatgactacccagttgacaccatt
gcaaaaaggttccgttatgatgcagcactggtatctgccttgatggacatggaagaagac
atcctagaaggcatgaaatcccagggtttgggggactacttgagtggccccttcactgtg
gtggtgaaggagtcttgtgatgggatgggagatgtgagtgagaagcatgggagtgggcca
gctgtgcctgagaaggccgttcgcttttccttcactatcatgaatattactatcacacaa
gatcaggagagcgtgaggatatttgaagaatccaagcccaactctgagctgtgctgtaag
cccttgtgcctcatgctggctgatgagtcggaccatgaaaccctgacagccatcctgagt
cccctcattgcagagagagaggcgatgaaaagcagtgaattgctgcttgagatggggggc
atcccaagaactttcaagttcatctttagaggaacaggctatgatgaaaaacttgtccgg
gaagttgaaggtctcgaggcttctggctctgtctacatttgcactctctgtgatgccaca
cggctggaagcttcccaaaatcttgtccttcactcaatcacgaggagtcatgcggagaat
ctggaacgttatgaagtctggaggtccaacccctatcaggagtcggcagaagaactgaga
gacagggtgaaaggggtctcagcaaagcctttcatcgagacagtcccttccatcgatgct
ctccactgtgacattggcaatgcggcagagttctacaaactcttccagctggaaattggg
gaagtttataagaatcccaatgcgtccaaagaagagaggaagcgatggcaggctacccta
gacaagcacctccggaaaaaaatgaacctgaagcccatcatgaggatgaatggcaacttt
gccaggaagctcatgaccaaggagacggtggaagcagtatgtgagttaattcactgtgag
gaaaggcatgaggccctgagggagctaatggacctttatctgaaaatgaaacctgtgtgg
cgctcaacatgcccagccaaagagtgcccagaatcactttgccagtatagtttcaactca
cagcgttttgcagaactcctgtctaccaagttccggtacagatatgaggggaaaatcacc
aattactttcacaagaccctggcccatgtccctgagatcatcgagagagatggctccatc
ggagcctgggccagtgaagggaacgaatctggtaataaactcttccgacgtttccggaaa
atgaatgctagacagtccaagtgttatgaaatggaggatgtcctgaaacaccattggttg
tacacttccaaatacctccagaagtttatgaatgctcataatgccgtgaagaataccggt
ctcattatcaactcacaagcagaatttgaagactctttagggctagaagactcactggaa
attcttaattcaatggaattctaa
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