Sarcophilus harrisii (Tasmanian devil): 100922688
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Entry
100922688 CDS
T02286
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100922688 (HMBOX1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100922688 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_31
HTH_37
HTH_26
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
100922688
NCBI-ProteinID:
XP_031806779
Ensembl:
ENSSHAG00000016211
LinkDB
All DBs
Position
2:complement(138408357..138664777)
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AA seq
444 aa
AA seq
DB search
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHNDK
FGRRPSYGGGSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APIPVEDPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAA
VNHTILALARQGASEIKTEALDDD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttcctttccagtggttttgctggaaaccatgtctcactacacagatgaaccc
agatttactatagagcaaatagacctccttcagcgccttcgacgtactggaatgaccaaa
catgaaattctccatgctttggaaactttggatcgtctcgatcaagagcataatgacaaa
tttgggagaaggcccagctatggaggtggttcctatggaaatagtaccaacaatgtccca
gcatcttcctctacagctactgcttccacacagacccagcattcgggaatgtccccatca
cccagcaacagttatgatacttccccacaaccttgtactaccaatcaaaatggtagggaa
agtaatgaaaggttgtccacttcaaatggaaagatgtctcctactcgttatcatgcaaac
agcatgggtcagagatcatacagttttgaagcctcagaagaggacctagatgtagatgat
aaagtggaggaattaatgaggcgggacagtagtgtgataaaagaggaaatcaaagctttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacaggtatcagtcagagc
cggatttcccattggctgttgcagcagggatcagacttgagtgaacagaagaaaagggca
ttttatcgatggtatcagcttgagaagacaaaccctggtgctactctaagtatgagacct
gctcccattccagtagaagacccagaatggagacagacacctcccccggtcactgcaaca
tctggcaccttcagactaaggcgtggtagccgatttacttggagaaaagagtgcctggct
gtcatggaaagttacttcaatgaaaatcagtatcctgatgaggcaaagagagaagaaatt
gccaatgcttgcaatgctgttatacagaagccaggcaaaaaactgtctgacctggaacga
gttacttccctaaaagtctacaattggtttgccaacagaaggaaggagatcaagagaaga
gccaatatcgaagcagcaatcctggagagtcatgggatagatgtacagagtccaggaggc
cattccaacagtgatgatgtagatggaaatgactactcagagcaggacacttggcaagta
cgcaatggggaggaggaggagggacgaagttctgagggaggcagagaagcagagaaggat
gacagcactagccatagtgaccaccaagaccccatctcgctagctgtggaaatggcagca
gtcaaccataccatattggccctggcccggcaaggagccagtgagatcaagacagaggcc
ctggatgatgactga
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