KEGG   Sarcophilus harrisii (Tasmanian devil): 100922728
Entry
100922728         CDS       T02286                                 
Symbol
PSMC5
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
  KO
K03066  26S proteasome regulatory subunit T6
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03050  Proteasome
shr05010  Alzheimer disease
shr05012  Parkinson disease
shr05014  Amyotrophic lateral sclerosis
shr05016  Huntington disease
shr05017  Spinocerebellar ataxia
shr05020  Prion disease
shr05022  Pathways of neurodegeneration - multiple diseases
shr05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100922728 (PSMC5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100922728 (PSMC5)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100922728 (PSMC5)
   05012 Parkinson disease
    100922728 (PSMC5)
   05014 Amyotrophic lateral sclerosis
    100922728 (PSMC5)
   05016 Huntington disease
    100922728 (PSMC5)
   05017 Spinocerebellar ataxia
    100922728 (PSMC5)
   05020 Prion disease
    100922728 (PSMC5)
   05022 Pathways of neurodegeneration - multiple diseases
    100922728 (PSMC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:shr03051]
    100922728 (PSMC5)
Proteasome [BR:shr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     100922728 (PSMC5)
SSDB
Motif
Pfam: AAA AAA_lid_3 Prot_ATP_ID_OB_C AAA_2 AAA_5 AAA_16 AAA_22 AAA_lid_PRS2_C nSTAND3 PRS7_OB RuvB_N TIP49 AAA_18 AAA_28 Mg_chelatase AAA_3 AAA_33 NPHP3_N AAA_14 Parvo_NS1 ATPase PhoH AAA_17 FapA IstB_IS21 AAA_24 AAA_7 AAA_25 DUF815 Sigma54_activat bpMoxR DUF7006 DUF5906 RNA_helicase ABC_tran Zeta_toxin AAA_19 TsaE AAA_11 HR1 Prominin
Other DBs
NCBI-GeneID: 100922728
NCBI-ProteinID: XP_003768500
Ensembl: ENSSHAG00000013093
UniProt: G3WIV6
LinkDB
Position
4:complement(323227488..323231857)
AA seq 407 aa
MALDGPEQQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLL
REELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRND
SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG
IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR
EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID
ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEV
KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcgctggacggaccggagcagcagatggagttggaggagggcaaagccgggagtggg
ctacggcagtattacctgtccaaaatcgaggaactgcagctgattgtgaatgacaagagt
caaaatctccgacgtctgcaagcccaaagaaatgagctaaatgcaaaagtgcgcctgctt
cgggaggagctgcaactgttgcaggagcaggggtcatatgtgggggaagtggtccgggct
atggataaaaagaaagttttggttaaggtacatcctgaggggaagtttgtggtggatgta
gataagaacatcgacatcaatgatgtaacccccaattgccgtgtggcccttcgaaatgac
agctacaccctgcacaaaattctgcccaacaaagtagatccattggtatctttaatgatg
gtggaaaaagtgcctgattcaacctatgagatgattggtggcctagacaagcagattaag
gagatcaaagaagtgattgaactgcctgttaagcatcctgagctctttgaggcactaggc
attgcacagcccaagggtgtattgctgtatggacctccaggtacaggcaaaactcttttg
gctcgggctgtggctcatcacactgactgcacctttattcgtgtctcaggctcagaattg
gtacagaaattcattggtgaaggagcacgaatggtacgggagttgtttgtcatggcccga
gaacatgccccctccatcatttttatggatgagattgactccattggttcctcacggcta
gaaggtggctctgggggggacagtgaagtgcagcgaacaatgctagaattgcttaaccaa
ctggatggctttgaagccactaagaacatcaaggttatcatggccactaacagaattgac
atcctggattctgctctacttcgccctggtagaattgacaggaagattgagtttccaccc
cctaatgaggaggcacgattggatattttgaagattcactctcggaaaatgaatctgacc
cgcggcatcaacctacggaaaattgcagagctcatgcctggggcatcaggagctgaagtg
aagggtgtgtgtactgaagctggaatgtatgcccttcgagaacggcgtgtccatgtcacc
caggaagactttgagatggcagtagccaaggtcatgcaaaaagatagcgagaagaacatg
tccatcaagaaactatggaaatga

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