Sarcophilus harrisii (Tasmanian devil): 100922848
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Entry
100922848 CDS
T02286
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100922848 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100922848 (JMJD1C)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100922848 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
Tudor_KDM3B
zf-C5HC2
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
100922848
NCBI-ProteinID:
XP_031812754
Ensembl:
ENSSHAG00000003458
LinkDB
All DBs
Position
2:639505491..639545066
Genome browser
AA seq
2540 aa
AA seq
DB search
MIVMNDQVPEPQNVDPSMVQMTFLDDVVPSLLKGEDIGISSHRTSRSALRSTAVHDLSTL
AEASSPRSAMNQQQQLQQQQLQQQQQHRNIRLTKRKGSDSSVPDEEKMKEDKFDYLGRGE
SLKSKNKHFLNKRRKIDGDEKKLTLKRFRPDHILDNSDSSDSENTNKRMTNPPFQHIPES
DVRNINNSNINGDEGKSQRGEGAEEATVNRQSSWGPIPEEKKREGSDILKPASLELQDRP
LFSASDEFLFYDPNATQDGKGEKTRPLEFLPKDQFAPKEVSPKGVIDITNEAGADKVAQD
NSTRIFGFQPLQKLDTFGSESKLVFPNAQYLEPRKKDSETSWVSSIVNKPSLSAPSVMNP
LAVNEHLSAEKDKNPFGSYRTSLNVVSLTDDSKLHKRSPPPEGMKSKFGSLADASKPKSN
PLLDAIQPKLTHSPDSVKSKNSFSNSGHAMGERRMTNKTEHDLPRSSFHPVPTRVNALET
KSPLIIDKNEHFTVYRDPALVGQETGNNHVSSFLNQHSYPLHSPSHRTCLNATSHQPTLS
APPPHLMPGSSNQAPLPPISTHPLNTAPPPHPPVHHPHLLPAVLPGVPPAPLMGGHPRLE
AAHASSLSHLALAHQQQQQQQQQQQQQQPQQLPPQMAQQLPPQMAQQLPPQMAQQLPPQM
AQQLPPQMAQQLASQQMAPQQLAPQQLAPQQLAPQQLAPQQLVPQQMPPQQLPPQQPPPQ
QPPQPQMLQHPPPHLIGQAHPPTSFNQLGLYPIIWQYPNGTHSYPGVNLPSSKWVHPDNQ
VNAEGPMRRNTPSPWLHQPTPVTSADGLGLLSHIPVRPSSAEPQRPLKMTTHSSPPLSKT
LVDHHKEELERNVYIDPLRTVVPTPAKNDLDRMAAGKDSHLHRHYVDPMMAQLQRPPQES
GERLNQYKEEHQRVLQESIDVAPFTTRKALEAERENYVRINPLASSSPHGQPSKQDIDGD
RAVSNLYKMKHAAPQTLPPSNYFTTISNSVVNEPPQTFPPKEITALYMDKLGPGTSTVTN
PQALTSFMPSLSKPPPLIKHQPDGEGLGSKMAEQLPQQIPSHSLAAFGSDCRSPTHLTVS
ASNPMRSMPALHRAPVFHPPIHPGLDRKESTYSSLSPPTLTPVLPVNAGGKLQELQKPPT
LVPEPKDAQAAFKLAPDQSLSEMWRSPHSLGSEKSLWHMEKPSGKSLAPATASVIVRPSS
SMKYDGMSAMQPMPRERGSSSTGLNPADPWKMAEARDAGRLLFPSSNSSFSHAQYEKSFD
AASQSSVSGPLLVPITTGFTCNAKADITPVVATSNSSTSSWGSSELTYSLSTPILAPASL
QYISSSRVGQLTAHSQERRIMPSISTAASKANRAAQLSTAFSSSAEFIHLKKHKAALAAA
QFKTGLSFETEPLAGRSLAGPALTALEIPVGRSMLGNKAHTLSSGQSSQKQPKYHTKLKK
AWLTRHSEEDKNTNRVETPASAMSEMIKPCSVNLIASTSSELHSSMESKVLGEKSRDDKA
GRRKLKRTYESGSESGDSDGSESKAEQRTKRQPKPTYKKKQNDLQKRKGELEDEMRPNGL
ISRSSREKSKLKLPSSSSSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCYEIGPNLQKCR
ECRLFRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENY
DDDELDLETSKYILNIIGDKFCQLVTSEKIALSWVKKDAKIAWKRAVRGVREMCDACEAT
LFNIHWVCQKCGFVVCLDCYKAKERKSTRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSV
LTDLLDAMHNLREKFDNPSLCHCTNKPNIQVGRLPAVNGVSQVLQNVLTHSNKISLCPPE
TQQLDSPQKSEATGNTSPESDVSTDSKLTPPESQSPLHWLADLAEQKAREEKEENKESSL
GKPMNEEQDQDNSDSPDGTSSLAVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVY
STAAPSAKSGRTVPNILDDIIASVVENKIPPNKVSNTEEGKEGEAEETGEAEETGEAEAA
ETAGEAGEGEAKPEAAGEGEETRDAGEGEEAEAAAEGEATQAAQATQAAQAAETTEAVEV
PEETEEAEEAEVEEVEEVEETEEAEGEEAEGEEVEEEGAEDNQTIVLDEGDLLSEDVPHS
WMCEKQVLWLQDHKNNDNWKLFKLCWKQGQAVVVSGIHKKMNIGLWKAESISLAFGNHHA
DLLNCKDSVTSNSNVKEFWDGFEDISKRQKMKNGETVVLKLKDCPSGEDFKAMMPARYDD
LFKSLPLPEYCNPGGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVS
DVVNILVYVGVAKGNGVISKSGVLKKFEEEDLDDIVKRRLKDSTETPGALWHIFSSQDTD
KIREFLQKIAKEQGLEALPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVVQFLGDAIIL
PAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAV
KEAVRALKTHEDEMEELEEN
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atgattgttatgaatgaccaggtaccagaaccacagaatgttgatccttctatggttcaa
atgacctttcttgatgatgttgttccctctctgttgaaaggagaagatattggcatctcg
tcacatcgtacttctcgatctgctctgagaagcaccgctgttcacgatctttctacactg
gctgaagccagtagccccaggtcagctatgaatcaacaacagcagctgcaacaacagcaa
ctgcaacaacaacaacagcatcgaaacattcgactgaccaaaagaaaaggctcagatagt
agtgtgccagatgaagagaagatgaaggaagataagtttgattaccttggccgtggagaa
agtcttaaaagcaaaaataaacattttcttaacaaaagaagaaaaattgacggggatgaa
aagaaactaactttaaagagattccgacccgaccacattttagacaattctgacagcagt
gactcagaaaatacaaataaaagaatgacaaatccaccttttcagcacattcctgaaagt
gatgtgaggaatataaacaattctaatatcaatggagatgaaggaaaatcccagcgtggt
gagggagcagaagaagcaacagtaaatcgtcagtcttcatggggtccaataccagaagaa
aagaaacgtgaaggttcagacatcctgaagccagctagccttgagctgcaagataggcct
ctgttcagcgcctcagatgaatttctcttttatgatcccaatgccactcaagacggcaaa
ggagagaaaacccgtcctttagaattcttaccgaaggatcagtttgcacccaaagaagtt
tcaccaaagggtgttattgacattacaaatgaagctggtgcagataaggtggctcaggac
aactccacaagaatctttggttttcagccacttcagaaactggatacttttggtagcgaa
tccaaacttgtatttcccaatgcacaatatttagaaccaaggaaaaaggattctgaaacg
agctgggttagcagcattgtgaacaaaccaagtttgtcagcgcccagtgttatgaaccca
ttagctgtaaatgagcatctgagtgctgaaaaagataaaaatccattcggatcttaccgt
acttcattaaatgtagtttctctaactgatgacagcaaactgcataagcgaagtccaccc
cctgagggtatgaagtccaaattcggttctttagccgatgcgtccaaaccaaaatccaat
cctttacttgatgctattcaacccaaactcactcattctcctgactctgtgaaatctaag
aacagcttctcaaatagtggccatgccatgggagagagaaggatgacaaataaaaccgaa
catgacttaccaagatctagttttcatccagttccgactcgtgtcaatgctttagaaacc
aagagtcctcttatcatcgataaaaatgagcatttcacagtttatagagatcccgcgctt
gttgggcaagagacaggaaataatcatgtttcatccttcttaaaccagcattcttaccca
cttcattctccatcccatagaacttgtctcaatgccacctctcatcaacctactttaagt
gcccctcccccccacctgatgcctggctcttcaaaccaagcccctttgcctcctatcagt
acccatcctttgaacactgcccctcctccccaccctcccgttcatcaccctcatttgctt
ccggcagtgttacctggagtgcctccagcccctttaatgggcggccacccacggctagag
gccgctcacgccagcagcttgagtcacttagccctagcacaccagcaacaacagcagcaa
cagcagcagcagcaacagcagcagccgcagcaactgccaccacagatggcacagcagctg
ccaccgcagatggcgcagcagctcccaccacagatggcgcagcagctgccaccgcagatg
gcacagcagctaccaccgcagatggcacagcagctcgcatcacagcagatggccccacag
cagctggcgccacagcagctggcgccacagcagctggcaccacagcagctggcgccccag
cagctggtgccccagcagatgccgccacagcaactgccaccgcagcagccaccaccgcag
cagccaccacagccgcaaatgctacagcatccaccacctcatctcattggacaagcacat
ccgcccacttcctttaatcagctcggactctatccaattatttggcagtatcctaacggg
acccactcttacccgggagtcaacctaccctcttctaagtgggtccacccagacaaccaa
gtgaatgccgagggccccatgcggaggaatactcccagtccttggttacatcagcccacc
cctgtgacctctgctgatggtcttgggttactgagtcacattcctgtcaggccatccagt
gcagaaccgcaacggccccttaaaatgacaactcattctagtccaccgttgtcaaaaacg
ttagtagatcatcacaaagaagaattggagaggaatgtttatattgaccctctccggact
gttgtacccacaccagccaagaatgatttggatcgaatggcagctggaaaagacagtcac
ttacacaggcattatgtggatccaatgatggctcagttacagaggccacctcaggagagt
ggagagagactgaatcagtataaagaggagcaccaaagggtccttcaggaaagtattgat
gttgcccccttcacaaccaggaaggctctcgaggcggagagagaaaattatgtcagaatc
aaccctttggcctcttccagcccccatggccaaccttctaagcaagacatagatggggac
cgtgctgtgtcaaacctgtataaaatgaagcacgctgcgcctcagactttaccaccaagt
aactatttcaccactatatcaaacagtgtagtgaatgaaccaccacaaacattcccgcct
aaagagataaccgccctgtacatggacaaactgggtcctggcacctctacagtgaccaat
cctcaagctctgacttcgtttatgccgtcactttcaaagccccctcctttgattaaacac
caaccagatggggaaggcctgggtagcaagatggccgagcagcttccccagcaaatcccg
tcgcactccttggctgcttttggaagtgactgtcggagcccgacccatttgacggtttct
gcctcgaaccccatgcggagtatgcctgcgctacacagagcacccgtttttcacccaccg
attcatcccggtctggacagaaaggaaagcacctatagcagcctttcccctccgaccttg
actccagttttaccagtaaatgctggtggaaaactccaagagctacagaaacctccaact
ctagtgcccgagccaaaagatgctcaggcagccttcaagctcgcccccgaccagagccta
tctgaaatgtggcggtctcctcattcccttggcagtgagaagtccctgtggcacatggag
aaacccagcgggaaatcgctggcccctgccacagcctctgtcatcgtacgtccctcttca
agcatgaagtatgacggcatgtcagcaatgcagccaatgccccgggagcggggcagctcc
tcgaccggcctgaatccagcagatccctggaagatggcagaggccagggatgccgggaga
ctcctctttcctagttcgaattcgagcttttcacacgcccaatacgagaagagcttcgac
gccgcttcgcagagcagcgtctctggccccctcctggtacctatcaccaccggttttaca
tgcaacgccaaagcggacataacccccgttgtcgccacctccaacagcagcacctccagc
tggggtagctcagagttaacctactccttatcgactccgatcttggcccccgcgtctcta
cagtacatttcttcaagtcgcgtgggtcagctaacagcccactcgcaagaacgccgcatc
atgccgtcaatctccacagccgctagcaaggccaacagggcagcccagctcagcaccgca
ttttccagctcagcagaatttatccacttgaagaaacataaggctgcattggctgcggcc
cagtttaaaaccggtctttccttcgagaccgagcctcttgctggaagaagcctggcgggt
ccggctctcactgccctcgagatccctgttggccgcagtatgttggggaacaaggcgcac
acccttagcagtgggcagagctcccagaaacagcccaagtaccacaccaagctgaaaaag
gcctggctcaccagacattcagaggaagacaaaaacactaaccgggtggagactccagca
agcgccatgtccgaaatgatcaagccgtgctctgtcaatctcatagcctcgacatcgagt
gagctacatagcagcatggagagtaaggtcctgggagagaagtccagagatgataaagct
ggcagaaggaagctgaagaggacctacgagtctggctccgagagtggagattcagatggg
agcgagagcaaggctgagcagaggaccaagcgtcagcccaagcccacctacaaaaagaag
cagaacgacttgcagaagagaaagggtgaactcgaggacgaaatgaggcccaacggcctt
atcagcaggagttctcgggagaagagcaagctcaagctgccgagcagcagcagcagcgct
ggcatcccccgttccgtattaaaagactggcgtaaagtcaaaaagctaaagcaaactggg
gagtcctttctgcaggatgactcctgctatgaaataggtcccaatctccagaaatgcaga
gaatgcagactttttaggagcaagaaaggggaagaacctactcactctcctgtgttctgc
agattttactacttccgacggctgtccttcagtaaaaatggggtcgtcagaattgatggc
ttctcatctcctgaccaatatgatgatgaagctctgagtttatggacacatgaaaattat
gatgatgacgaactagacttggagacttccaaatatatcctgaatattattggtgataag
ttttgtcagttagtaacatccgaaaaaatagctttgtcctgggtgaaaaaagatgccaaa
attgcctggaaaagagcagtgagaggcgtccgtgagatgtgtgatgcatgtgaagcaaca
ttgtttaatattcattgggtctgccaaaaatgtggatttgtggtctgcttggattgttac
aaagcaaaggagaggaagagtacaagagataaagagctgtatgcttggatgaaatgtgtc
aagggacagcctcatgatcacaaacacttgatgccaacccagatcatcccaggctctgtt
ttaacagatcttctagatgcgatgcacaatcttagagaaaaatttgataatccatctctt
tgccattgtacaaacaaaccgaatatacaagttgggagacttcctgcggtgaatggggtg
tctcaggttctgcagaatgtccttactcacagtaacaaaatttctctgtgcccacctgag
actcagcagctggattcccctcaaaagtctgaggctactggaaatactagccctgagagt
gatgtaagcaccgacagcaagttaactcctcccgaatctcagtccccactccattggtta
gccgatctggctgaacagaaagccagagaagaaaaggaagaaaacaaagaatcttccctt
ggaaaacctatgaatgaagaacaagatcaagataactctgattctcctgacggcacaagc
tctcttgctgtgtcccagaataacgaacaaggatccaccttacgagacttgctgaccaca
accgcaggcaagctacgcgtcggctccacagatgcaggcattgcctttgctcccgtgtat
tccacagccgccccgagcgccaaaagtggaaggactgtgccaaacattctcgatgacatt
attgcttcagttgtagaaaataagatcccaccaaataaagtctcaaataccgaagaagga
aaagaaggagaagcagaagaaaccggagaagcagaagaaactggagaagcagaagcagca
gaaacagcaggagaagcaggtgaaggagaagcaaaaccagaagcagcaggagaaggagaa
gaaacaagagatgcaggagaaggagaagaagcagaagcagcagcagaaggagaagccaca
caagcagcacaagcaacacaagcagcacaagcagcagaaacaacagaagcagtagaagta
ccagaagaaacggaagaagcagaagaagcggaagtagaagaagtagaagaagtagaagaa
actgaagaagcagaaggagaagaagcggaaggagaagaagtggaagaggagggtgctgaa
gacaaccaaacaattgtcctagatgagggggatctgttgtctgaggatgtgccacattcg
tggatgtgtgagaagcaagtcttgtggctccaagatcacaagaataatgataattggaaa
cttttcaaactatgctggaaacaaggccaggctgtagtggtttctggtattcacaagaaa
atgaacatcggcctgtggaaagcagagtcgattagtcttgcttttggaaaccaccatgcc
gatctcctgaattgcaaagacagcgttacttcaaattccaacgttaaggaattctgggat
ggttttgaagacatttcaaaacgtcagaaaatgaaaaatggagaaacagttgttttaaaa
ctcaaagactgcccttcaggagaagacttcaaagctatgatgccggcaaggtatgatgat
ctgtttaaaagcctgccgttaccagaatattgtaatcctggaggaaaattcaatttggcc
tcccatttgccaggattttttgttcgtccagacctaggacccaggttgtgcagtgcatat
ggtgtggctgctgctaaagatcatgacattggaacaacaaatcttcatgtcgaagtttct
gatgttgtcaacattctagtttatgttggcgtagccaaaggaaatggagtcatctcaaaa
tccggcgtcctgaagaagtttgaagaggaggacctggatgacattgtaaagagaagactc
aaagactccactgaaactcccggtgctctgtggcacatcttctcaagccaagacaccgac
aagataagggagtttctccagaagattgcaaaagaacagggcctcgaagccctacccgaa
catgaccctatccgtgaccagagctggtacgtgaacaaaaaactccgtcagaggctgctg
gaggagtacggagtgaagacgtgcacggtcgtccagtttcttggtgatgctattattctg
ccagcaggtgcactgcaccaggtgcagaattttcacagctgtattcaggtgactgaagac
tttgtgtctccagaacatcttgtacaatcatttcacttaacacaggaactaaggttgctg
aaggaggaaatcaactatgatgacaaactgcaggtcaaaaatatcttataccatgcagtt
aaagaagcagtcagagctttgaagacacatgaagatgaaatggaagaattggaagaaaat
taa
DBGET
integrated database retrieval system
