Sarcophilus harrisii (Tasmanian devil): 100922990
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Entry
100922990 CDS
T02286
Symbol
LAMB3
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04151
PI3K-Akt signaling pathway
shr04382
Cornified envelope formation
shr04510
Focal adhesion
shr04512
ECM-receptor interaction
shr05145
Toxoplasmosis
shr05146
Amoebiasis
shr05165
Human papillomavirus infection
shr05200
Pathways in cancer
shr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100922990 (LAMB3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100922990 (LAMB3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100922990 (LAMB3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100922990 (LAMB3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100922990 (LAMB3)
09162 Cancer: specific types
05222 Small cell lung cancer
100922990 (LAMB3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100922990 (LAMB3)
09174 Infectious disease: parasitic
05146 Amoebiasis
100922990 (LAMB3)
05145 Toxoplasmosis
100922990 (LAMB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
LAMB1
Laminin_II
ATG16
F5_F8_type_C
DosC_2nd
Motif
Other DBs
NCBI-GeneID:
100922990
NCBI-ProteinID:
XP_031793149
Ensembl:
ENSSHAG00000010013
LinkDB
All DBs
Position
4:complement(104532092..104597294)
Genome browser
AA seq
1167 aa
AA seq
DB search
MWLLLMLMALPGLHAQQACSRGACYPPVGDLLVGRTRFLKASSTCGMTKPETYCTPYGEW
KMKCCKCDSRLPHGYNSHRVENVLSSSGPTRWWQSQNDVSPVSLQLDLDRKFQLQDIMLD
LQGPLPAGMLIEHSPDFGKTWKVYQYLAPNCAATFPQLRQGRPQSWQDVRCQPLSTQHTG
PNRGGKVHLNLLDLASGIPATQSQKIHELGEITNLRINFTRLASVPQRGYHPPSAYFAVS
QLRLQGSCFCHGHADSCAPLPGIPADPSARVQVHEVCVCQHNTAGLTCDRCAPFYNNRPW
KAADDQNPHECQRCECNGHSETCHFDPAVFAASQGVSGGVCDNCQDHTEGNNCERCQLHY
FRNRRPGAPIQETCIPCECDPDGAVPGAPCDPLTGQCVXKNVQGDTLDLSAGFTGLTTNP
RGCFCCDCSILGSRRDMPCDEETGRCLCLPNVVGPKCDQCAPNYWKVASGRGCEPCNCDP
HNSYSPQCNQFTGQCQCREGFDGPTCSAASIRQCPDRSYGDSGTACRACDCDFRGTEGPG
CDKTTGQCLCRPGFVGPRCDQCQRGFCDNYPICVVCHSCFQTFDRNIREEALRLRSLLNI
TAGLRPGSGLGDHVLGPRIGEAENSIRQIHAILRTPSVTEQEITEVANIIFSFRRTLQNL
QTNLPLEEETDSLLEELENLDRSLKLLLIQYQNKREQFERISSTDPSGSFRMLNSAYQTS
SQAVQRIASSSNLLLQVHDSRKEAERLERQLEGSGSAGGSQLQTLRQQMASFPNLTPTIN
KICGTTRQETCTPGQCQGITCPRDNGTACGADCRGILRQAGGAFRIAKQMSQQLQDFNAQ
LQQTRQMIREAEEAATQIQTDAQRLEIQVSNSRSQMEEDVRRTRLLIQQVRDFLTDPSTD
AATIQEISESVLALWLPTDSATVLRKMNEIQAIAARLPNVDLILSQTKQDITRARKLQEE
AELARSRAITVEGQVEDVVENLRQGMVALQEAEDTMLGTSRSLGLLQDRITEVQQVLAPT
ERMVTGMTEQLTSFRDRIEQLRHSIGEQREQSAQAQEIAQGASEHALSAQQGFERVKQKY
KELKNRMGQSPMLGEQGSRILNVKSEAEELFEETMTMMDRMKDMEVELLMGSQDIIRRSA
DLTGLEKRVEKIRDHINERVLYYATCQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtggctactccttatgttgatggcactgccaggactccatgcccagcaggcttgttct
cggggggcctgctaccctcctgtgggggacctgttggttggaaggacacggttccttaaa
gcttcctctacctgtggaatgacgaagcctgagacttactgtaccccatatggcgagtgg
aaaatgaaatgctgtaagtgtgactcccggctgcctcatggctacaacagtcaccgggtg
gagaatgtgctctcctcctccggccccacacgttggtggcagtcccaaaatgatgtgagt
cctgtttctctgcaactggatctggataggaaattccagctccaggacatcatgctggac
ttacagggacctctaccagcgggcatgctgattgaacattccccagactttggaaagact
tggaaggtgtatcaatacttggcccccaactgtgctgccaccttcccccagctccgccag
ggccggcctcaaagctggcaggatgttcggtgccagccactgtcaacccagcatactggg
cccaaccgtgggggaaaggtgcacctcaaccttttggacttagcatctggaattccggcc
actcagagtcagaagatacatgaactgggggaaattaccaacttgaggattaacttcacc
aggctggcttcagtgccccaaagaggctaccacccacctagtgcctattttgctgtgtca
caactgcgtttacaggggagctgcttctgccatggccatgctgacagctgtgctcctctc
ccaggcatccctgctgacccttcagctagagttcaggtccatgaggtctgcgtttgccag
cataatactgctggtctcacctgtgaccgctgtgctcccttctacaacaaccgaccttgg
aaagctgctgatgaccagaatcctcatgaatgccagaggtgtgagtgcaatgggcattcg
gagacctgccactttgacccagctgtatttgctgccagccagggggtgagcggaggtgtg
tgtgacaattgccaggaccacaccgaagggaacaactgtgagagatgtcagctgcactac
tttcggaaccgccgcccaggcgctcccatccaggagacctgcattccttgtgaatgtgac
ccagatggggcagtgcctggagctccctgtgacccactgactggacagtgtgtcnnaaag
aatgtacagggagacacgcttgacctatcagctggtttcactggactcactaccaaccct
agagggtgtttctgctgtgactgtagcatcctgggatctcggcgagacatgccctgtgat
gaggagactggccgttgcctctgtctgcccaatgtggttggtcccaagtgtgatcagtgt
gctcccaattactggaaggtggccagtggcaggggctgtgagccgtgcaactgcgaccct
cacaattcctacagcccccagtgtaaccagttcacaggtcagtgccagtgccgggaagga
tttgatggtccaacgtgcagtgctgcatctatccgccagtgtcctgatcggtcttatgga
gatagtgggacagcatgtcgagcctgtgactgtgacttccgggggacagagggcccaggt
tgtgacaaaactacaggtcagtgtctgtgtcgtccgggctttgttggtccccgttgtgac
caatgccagagaggcttctgtgacaactaccccatctgtgtggtctgccactcctgcttc
cagacatttgataggaacatccgagaggaagccctgcgtcttaggtccctgctcaacatc
acagctgggcttcggccagggtctggccttggggaccatgtgttgggcccccggatcggg
gaggcagagaacagcatccggcagatccacgcgatcctcagaacaccttcagtcacagag
caagagataactgaggtggcaaacatcatcttctctttcaggaggaccctccagaatctg
cagacaaatctgcccttagaagaggaaacagattcacttttagaagagctggagaatctg
gacaggagtcttaaactcctcctcatccagtatcagaacaagagagaacagtttgagaga
attagtagcacagatccttcaggttccttccgaatgctgaactctgcctaccagacatct
tcccaagctgttcaacgaattgctagcagttcaaacttgctgctccaagtccatgacagc
cggaaagaagctgaaaggctggagaggcagttggaaggaagtggaagtgctggtgggtca
cagcttcagaccctaagacaacaaatggcttcctttcccaatctgacacccaccatcaac
aaaatttgtgggaccacaaggcaggagacctgtaccccagggcaatgccaagggataacg
tgtccccgagacaatggcacagcctgtggtgctgattgtagaggcatcctccggcaggca
ggtggtgccttcaggattgctaagcaaatgtcccaacagctccaggacttcaatgctcag
ctccagcaaaccaggcagatgatcagggaagcagaagaagctgctacccagatccagaca
gatgcccaacgcctagagatccaggtgagcaacagccgttctcagatggaagaggatgtc
cgtcgtacccgcctcctcatccaacaggtccgggactttctcactgaccccagcacagat
gcagccaccatccaggagatcagtgaatcagttttggctctatggctgcctacggactca
gctacagtccttcggaagatgaacgagatacaggccattgctgccagattacctaatgtg
gacctgattctgtcacagaccaagcaggatattactcgggctcgaaaactccaggaggag
gcagaattggccaggagccgtgccattactgtggaaggtcaagtagaggatgtggttgag
aaccttcgacagggcatggtagctcttcaggaggcagaggacaccatgctaggtaccagt
cgctccctgggactcctgcaggatcggatcactgaggtccagcaggttcttgcaccaaca
gaaaggatggtgacaggtatgacagagcagctgactagcttcagggaccggattgaacag
cttcgccacagtatcggggagcagagagaacagtctgcccaagcccaggagattgcccag
ggagccagtgagcatgctctcagtgctcaacagggatttgagagagtgaaacaaaagtat
aaagaactgaagaaccgaatgggtcagagtcccatgctgggggagcaggggagccggatc
ctgaatgtcaagtctgaggctgaagagctctttgaggagaccatgactatgatggacagg
atgaaagatatggaagtagagctgctaatgggaagccaggacatcatccgacgttcagca
gacctgactggtttggaaaagcgtgtggagaagatacgggaccacattaacgagcgggtg
ctctactacgccacctgtcaatga
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