Sarcophilus harrisii (Tasmanian devil): 100923080
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Entry
100923080 CDS
T02286
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100923080 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shr03009
]
100923080 (NVL)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100923080 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_2
AAA_14
TIP49
AAA_28
NPHP3_N
AAA_33
RNA_helicase
Mg_chelatase
Vps4_C
AAA_18
NACHT
nSTAND3
ABC_tran
AAA_3
Rad17
Viral_helicase1
AAA_17
TsaE
IstB_IS21
nSTAND_NTPase5
Zeta_toxin
ATPase
Parvo_NS1
DUF4194
Motif
Other DBs
NCBI-GeneID:
100923080
NCBI-ProteinID:
XP_012403364
Ensembl:
ENSSHAG00000005391
LinkDB
All DBs
Position
4:388688178..388772793
Genome browser
AA seq
905 aa
AA seq
DB search
MKKSAAGAGDRSYVTAGQVSQAFSRALPAARSPTSCWRPGCLSLEISSDMKPRVVTYVDR
KLKRRIVQYLSSSECGKYVDIGTLASDLQEMYSVDYGRRKRNAFRIQVEKVFSIIKREKE
LEDLTELEDEHLSKRARQSQEFNECAANKTDDDSDVDNFPDQPSANHMNNSLLSLYRKGN
PDILPESPAIEQDKNSLSMPKNVFPLTTPAFTRVSEGGWFIDKTPSGKKENTFLDLSDEQ
GNHRKTISELQDSKDNSLLESEGKRKNRLKRTRRKTEDHQKVDGEIENVLQKKARTQTLE
LQIPTVKFEDVGGNDVTLKEICKMLIHMRHPEVYHYLGVVPPRGFLLHGPPGCGKTLLAQ
AIAGELELPILKVAATEIVSGLSGESEQQLRALFEQAVSNAPCILFIDEIDAITPKREVA
SKDMERRIVAQLLVCMDDLNNLAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD
EASRERILRTLCRKMKLPEAFDFRHLAHLTPGYVGADLMALRQEAVSCAVDRVLLKLNVM
KHKDDQSGDMTMEGSLVELMETENDLKPQDLPVKDELLRLLELLKDQNSIPEEQLQMLCI
EMNDFIVALSKVQPSAKREGFVTVPNVTWSDIGALEDIREELTMAILAPLRYPDQVKALG
LMTPAGILLAGPPGCGKTLLAKAVANECGLNFISVKGPELLNMYVGQSESAVRQVFQRAR
NSAPCVIFFDEIDGLCPQRAKVESAVSDRVVSQLLTEMDGVESRQQVYILAATNRPDSID
RAILRPGRLDKILFVGLPSPADRFAILKTITKNGTTPPLDVSVSLEAIAYDPRCDYFSGA
DLYLLIREASICVLRQEMASHKSGDKKGEVKVSQEHFEEAFKKVKPSTSKEDQMMYEKLR
QSLSR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagtgccgcaggggcgggtgatcgctcctatgtaacagccgggcaggtgagt
caggcgttctccagagcccttccggcggcgaggtccccgacttcctgttggagacccggc
tgcctcagtctggagatttcttccgacatgaagccgcgagtcgtcacctacgtggaccga
aagctgaaaaggcgcatcgtacagtacctgagcagtagtgaatgtggaaaatatgtggac
attggcaccttagcatccgatttgcaagaaatgtacagtgtagattatggccggaggaag
agaaatgcttttagaattcaggtagaaaaagtttttagcataatcaagagagagaaagaa
cttgaagacttaactgaattagaagatgaacacctgtcaaaaagagcaagacaaagtcaa
gagtttaatgaatgtgcagcaaacaaaacagatgatgattcagatgtggacaatttccca
gatcaaccgtctgcaaatcacatgaataactctctgctatcattgtaccggaaaggaaat
cctgacattttaccagaaagtcctgcaattgaacaagataaaaatagtctctctatgcca
aagaatgtcttccccttgacaacgcctgcttttaccagggtttctgaaggtggatggttt
attgataaaactccaagtggaaaaaaagagaatacttttttagacctttcagatgagcaa
ggcaaccataggaagacaatttctgagttacaggattcgaaagataattctcttctagag
agtgaaggaaaaagaaaaaacagacttaagagaaccaggaggaaaacagaggatcatcaa
aaagtagatggagaaatagaaaatgttttgcaaaaaaaagccagaactcaaactctagag
ctacagatcccaactgtgaagtttgaagatgtagggggcaatgatgtaacactgaaggaa
atatgtaaaatgcttatccatatgcgtcatcctgaagtataccactatcttggtgtagta
ccacctagaggatttcttttacatggacctccaggttgtgggaaaacattacttgcacaa
gcaattgctggggagcttgagctgccaattcttaaagtagctgctactgagattgtgtct
ggattgtcgggggaatctgaacagcagttgagagcactctttgaacaggctgtgtcaaat
gcaccttgtatcctttttattgatgaaattgatgctatcacccccaaaagagaagttgct
tcaaaagacatggaacggagaattgtggcccagctcctagtctgcatggatgacctgaat
aatttggctgctacagcgcaggtcttagtaattggagctaccaacagaccagactcacta
gacccagcattgagacgtgcaggaaggtttgacagagaaatttgtttgggtattccagat
gaagcatccagagaaagaattcttcggactttgtgtagaaagatgaagctccctgaggct
tttgattttcgtcacttagcccaccttacaccaggttacgttggtgctgatctaatggca
ctacgtcaggaagcagtcagctgtgctgttgatagggttctgttaaagctaaacgtgatg
aagcacaaagatgaccagtctggagatatgacaatggagggaagtctggtagagctgatg
gaaacagaaaatgatttaaaaccacaggaccttcctgtaaaggatgaattactgaggcta
ctagagttgctaaaggaccaaaactccatcccagaagagcagctgcaaatgttatgcata
gaaatgaatgatttcattgttgctttgtccaaagtacaaccttctgctaagagagaaggc
tttgtcactgtccctaatgtgacctggtcagatattggagcactggaagatattcgagag
gagcttaccatggcaatattggccccattgcgctatccagatcaggttaaagctcttgga
ttaatgactccagctggtatccttcttgcaggaccacctggctgtggcaagacactcttg
gcaaaggctgttgcaaatgaatgtggactgaatttcatttcagtgaagggccctgaattg
ttaaatatgtacgttggacagagtgagtcagctgtgcgacaggttttccagcgggctaga
aattcagcaccatgtgtcatcttctttgatgaaatagatggattgtgccctcaaagagca
aaagtggagtcggctgtcagtgaccgggtggtgagtcagcttcttacagaaatggacggt
gtggaatcccggcagcaggtttacattctggcagccaccaacaggccagattctattgac
cgggctatcctacgtcctggccggctggataaaattctttttgtgggtttgccatctcct
gctgaccgttttgccatcttgaaaacaatcacaaagaatggtaccacacctcccctggat
gtttctgtcagtttggaggccattgcttatgaccctcgatgtgattatttctcaggtgct
gatctttatcttctgatacgagaagcttccatctgtgtcttaagacaggaaatggcaagt
cacaagagtggggataaaaaaggagaagtcaaggttagccaggagcactttgaagaagct
tttaaaaaagtgaaaccttctacatcaaaagaggatcaaatgatgtatgaaaaacttcgg
caatctctcagcagatag
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