Sarcophilus harrisii (Tasmanian devil): 100923098
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Entry
100923098 CDS
T02286
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100923098 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100923098 (PEX1)
Membrane trafficking [BR:
shr04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100923098 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
AAA_18
AAA_33
AAA_7
RNA_helicase
TIP49
AAA_22
AAA_5
Sigma54_activat
ABC_tran
AAA_2
AAA_29
AAA_24
DUF815
NACHT
Mg_chelatase
ATPase_2
IstB_IS21
Rad17
APS_kinase
Parvo_NS1
Viral_helicase1
KTI12
AAA_23
Motif
Other DBs
NCBI-GeneID:
100923098
NCBI-ProteinID:
XP_031795871
Ensembl:
ENSSHAG00000018923
UniProt:
G3X3V1
LinkDB
All DBs
Position
5:complement(244498390..244546089)
Genome browser
AA seq
1288 aa
AA seq
DB search
MWGSGRLEGTGSGGVAAVTVAFSHARDCFLHLPRALAAQLHLQQNQAIEVAWGHQPVFLS
WVEGRPHSNHGENVAEINRQVGQKLGISDGEQVFLRPCSHVVSCHQVEVKPLSADDWEIL
ELHASSLEQHLLDQIRIVFPNAIFPVWVDQQTYIYIQIVALMPAATYGRLENDTELFVHP
KTRQTKENATDLPFSRADDTEGILNKYRRDQEDLTGGFQTKQPNSSTAGAQELNKQESDL
IFGMFTMPNIWNLMGSIFSYGAEKKIDTPWGLSEINAFKNMQLTIVPKNSVFRVCNSQPP
SIQRMSASSLFQKDHAIHIFPWNQQYFDLEPTFTVTYGKLTQLLSPKQQPSETKQNVLLG
EKEKQVVQQQDKKQICSGSSQGAGKTCVVQIVWNGLEELKNSIQYNNTIEVLHTGKVWIP
EDMRKRLNIQMHSALRISPLESIPPIPKSIKLQPRENLNKDISEEEIKSAFSLWLQNSST
VTCPWILSDKEYINLTLKDGLKKFSLSIVHPLEAEKNDSENVFMLSASLLQKIDIQVLLF
PSQEESNEETSFIPFLTLNSLGGLNKQGIISLEHVTHSLLGRPLSRQLTSIVAGLRNGAV
LITGVKGSGKSTLAKAVCREAFDRLDAHMEIIDCKALRGKRPENVQKALESAFSEAIWRQ
PSVVLLDDLDHIVGVSAMPEQEHGPNAVQSQRLAYALRDMIKEIIAMGSLIALIATSQTQ
HSLHPLLVSAQGIHLFQSFQPINAPDQEQRQEILHCVIKNKLNCDVDKFTDLDLRCIAKE
TEGFVARDFTMLVDRAVHACISSRNVCTKEGLLLKTLDFQKGLKGFTPTSLRNVNLHKPK
DVGWDKIGGLREVRQILMDTIQLPAKYPDLFSNLPIRQRTGILLYGPPGTGKTLIAGVIA
RESGMNFISIKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG
VTDRVVNQLLTQLDGVEGLEGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDEVSRLE
ILKVLSGSLPLTDDVDLEHLASVTASFTGADLKALLYNAQLEAIHGRRASGLSQDIGSSS
DSDLSLSSMVFLNHSSGSDDSAGDGECGLEQSLVSLEMSDLLPEESKFNMYRLYFGSSYE
SELGNGTSSELSSQCLSGPSSTSHDFTGVTGRDQVLSQPPMLRMSSQEGLQELTQDQREQ
MKAEISAIKERYRSQNGEDVTVVQPGPVKNTLTISQAHLITALSNTRPSISPDDWKNFAD
LYDNFQNPKKRKSQSATAFRPGQKVTLA
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtagtggtcgcctcgagggcaccgggtctggaggggtcgcggccgttaccgtg
gccttctcccatgcccgtgactgctttctccacttgccgcgggcgctcgcggcccagctg
catctccagcagaatcaagcgatagaagtggcctggggtcaccagcctgtattcttgagc
tgggtggaagggagacctcattctaaccatggtgaaaatgtggctgaaattaataggcag
gttggccagaagcttggaatttcagatggggaacaggtatttctcaggccctgttcccat
gtggtatcttgtcatcaagtcgaagtgaaacccctctcagcagacgattgggagatactg
gagctgcatgcttcttctcttgaacagcatctccttgatcagattcgaatagtctttcca
aatgcgattttccccgtttgggttgatcagcagacgtacatttatatccaaattgttgca
ctaatgccagctgccacttacggtagattagaaaatgatactgaactctttgttcatccc
aagacgcgccagaccaaagaaaatgccacagatctgcccttttctagagcagatgataca
gaaggaatacttaataaatatagaagagaccaagaagacctgacagggggatttcaaaca
aaacaacccaattctagtactgcgggagcccaggaactgaataaacaagagtcagatctt
atatttggcatgtttacaatgccaaacatatggaatctaatggggagcattttttcttat
ggagctgagaaaaaaattgacacaccctggggtttaagtgaaattaatgcattcaaaaat
atgcagttgacaattgttccaaaaaactctgttttcagagtatgtaattctcagcctccc
agtatacaacggatgtcagcatcatctttgtttcagaaagaccacgccattcatattttt
ccctggaatcagcaatattttgatttggagcccacttttactgtgacctatggaaagtta
actcagttgctctccccaaagcaacaaccaagtgaaacaaagcaaaatgtcctgttaggt
gaaaaagaaaagcaagtggttcaacaacaagacaaaaaacagatttgttcaggtagtagt
caaggagctggtaagacctgtgtggtgcagatagtctggaatggacttgaggaactgaag
aattccatacagtataacaacactatagaagttctccataccggaaaagtttggattcca
gaagacatgagaaaaagactgaatatacaaatgcattccgctctccgaatatcaccgttg
gaatcaatccccccaattccaaaatctatcaaattacagcctagagaaaatttaaataaa
gacataagtgaagaagaaataaaatctgctttcagtttatggctgcagaattccagtaca
gtaacttgtccatggatactatcggataaagaatacattaatttgacacttaaagatggg
ctgaagaagttttctttgagtattgttcatcctttggaagcagaaaaaaatgattcagaa
aatgtctttatgttgagtgccagtttactccagaagattgatatacaagttcttctgttt
ccttcacaagaggaaagcaatgaggaaaccagctttattccttttttaacactgaactcc
ttaggggggttgaataaacaaggaataatttctctagagcatgtcacccatagtctcttg
gggcgccctttatctcgccaattgacctccattgttgctggacttcggaatggagctgtt
cttatcacaggagtgaaggggagtggaaaatcaactctagctaaggctgtctgcagagaa
gcatttgatagactggatgctcacatggaaataattgactgtaaagctttaagagggaaa
agacctgaaaacgtgcagaaagccttggagtcagctttctcagaagctatatggaggcag
ccttctgttgttctcctggatgacctggatcatattgttggtgtatcagccatgccagag
caggagcatggtcctaatgcagttcagagtcagcgattggcatatgccttgagagacatg
atcaaggagattattgccatgggaagtttgattgctttgattgccacaagccagactcag
cattctttacatcctttacttgtctctgcacaaggaatccatctctttcaaagcttccag
cctataaatgctccagatcaggaacaaagacaggaaattctgcattgtgtaataaaaaat
aaacttaactgtgatgtagataaattcactgatcttgacctgcgttgtattgcaaaagaa
actgaaggttttgtagctagagatttcacaatgcttgtggatcgagctgtccatgcctgt
atctccagccggaacgtgtgcacaaaggagggattacttttaaaaaccttagactttcaa
aaaggtctcaaaggctttactccaacatctctgcgaaatgtaaacctgcataagcctaaa
gatgtaggttgggacaagattggtggcttacgtgaagttcggcagattctcatggatacc
atccagttaccagccaagtacccggatttattttcaaacttgcctatccgacagaggaca
ggaatactgctgtatggtcctcctggtacaggaaaaacattaatagcaggtgtaattgca
agagagagtgggatgaattttatcagtatcaagggaccagaattactcagtaaatatatt
ggagcaagtgaacaagcagttcgagatatttttatcagggcacaggctgccaaaccttgc
attcttttctttgatgaatttgaatccattgctcctcgacgaggtcatgataacacaggc
gttacagaccgtgttgttaaccagttactaactcagttagatggagtagaaggcttagag
ggtgtttatgtgctggctgctactagtcgccctgacttgattgaccctgccctccttagg
cctggtcgtctagacaaatgtgtgtattgccctcctcctgatgaggtgtctcgtcttgaa
attttaaaagtccttagtggttctctgcctctgacagatgatgtagacctcgagcattta
gcatcagtgactgcttcgtttacaggcgcagatctgaaagctctgctctacaatgctcag
cttgaggccatccatggcaggcgggcatcaggcttgtcacaagatattggttccagttct
gatagtgacctcagtctgtcttcaatggttttccttaatcatagcagtggctctgatgat
tcagctggagatggagaatgtggtctagaacagtctcttgtctccctagagatgtctgat
ctgcttcctgaagaatcgaaattcaatatgtatcggctttactttggaagctcttatgaa
tcggagctaggaaatggaacttcttctgaactgagctctcagtgtctgtcaggacccagc
tccacatctcatgattttactggagtaactgggagagatcaggtgctttcacagccccca
atgctcagaatgtcatcccaagaaggtttgcaagagctcacacaagatcaaagagagcaa
atgaaagcagaaatcagtgccatcaaagagagatacaggagccagaatggagaggatgtt
accgttgttcaaccaggaccagttaagaatacattaactattagccaggctcatttaatt
actgccctcagtaatacaagaccatccattagtccagatgactggaagaattttgctgat
ctctatgataactttcagaatccaaagaagaggaaaagtcaaagtgcaacagcttttcga
ccaggccaaaaagtaacattagcataa
DBGET
integrated database retrieval system
