KEGG   Sarcophilus harrisii (Tasmanian devil): 100923162
Entry
100923162         CDS       T02286                                 
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013  Nucleocytoplasmic transport
shr03015  mRNA surveillance pathway
shr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100923162 (NCBP2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100923162 (NCBP2)
   03015 mRNA surveillance pathway
    100923162 (NCBP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100923162 (NCBP2)
   03041 Spliceosome [BR:shr03041]
    100923162 (NCBP2)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     100923162 (NCBP2)
Spliceosome [BR:shr03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    100923162 (NCBP2)
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 100923162
NCBI-ProteinID: XP_031813382
Ensembl: ENSSHAG00000004363
LinkDB
Position
3:10626415..10632200
AA seq 157 aa
MSGGLLSALDSDSYVQLGQYRDQHFRGDKKDQEKLLKKSCTLYVGNLSFYTTEEQIYELF
GKSGDIKKIIMGLDKVKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK
EGRQYGRGRSGGQVRDEYRKDYDAGRGGYGKMCKINE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcgggcgggctcctgagcgcgctggacagcgactcctacgtgcagctgggccagtac
cgagaccagcacttccggggtgacaagaaggaccaagagaagttattgaagaaaagctgc
accttgtatgtggggaacctgtctttttataccaccgaggaacagatttatgagctcttc
ggaaaaagcggtgacatcaagaaaatcattatgggcctggataaagtaaagaaaacagca
tgtgggttctgctttgtggaatattactccagagcagatgctgaaaatgccatgcgctac
attaacgggacccgtctggacgatcgcattatccgaactgattgggatgccggcttcaaa
gagggccgccagtatggacgaggacgatctgggggccaggtacgagatgagtatcgaaaa
gactatgacgctggcagaggaggctacgggaaaatgtgcaaaatcaatgagtga

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