| Entry |
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| Symbol |
SHOC1
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| Name |
(RefSeq) protein shortage in chiasmata 1 ortholog
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| KO |
| K28108 | shortage in chiasmata 1 |
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| Organism |
shr Sarcophilus harrisii (Tasmanian devil)
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| Brite |
KEGG Orthology (KO) [BR:shr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:shr03036]
100923236 (SHOC1)
Chromosome and associated proteins [BR:shr03036]
Eukaryotic type
Meiosis-specific proteins
Others
100923236 (SHOC1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(276839209..276971072)
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| AA seq |
2091 aa
MFTALKYHSVDYSHENLIRKKSSIRSLLLHIPSYLHPDENNCHAGAVDEKLRKPWTSVSI
PISLQMKDFSVLDEWKTVVSVEDVPEKKTVSYNMPHIYDFEEVVPSSNPSSQTDIEKSFL
FTPNEVFHRVTYSETCPALQTTNQNLYIDDEIIFINSLAEYKKQLPTVSTLLSRLKVFLL
KDPCLDFKEQQMLMEADHFRSRIHFDVILKEELYMIKELFKDEKQFILQVKSELLKPVSL
QERTDIQTISELKKSLKSAPEIIGHVIENEKLFEREDLEMPLNPPYPITQRILVNPIHAG
LQTDQLAPVYKMKFTPAESCTKKCRVEPWSKKYQSSLDSCLLTVPQTEEPVIHYSIRDLK
RMFSVEVEILMLDSLKEKWWKQGLNMIKIDTLEHLIPDLCHHNLLQTQMEILPIKPVQLE
WYLEKESDTVVQLKSSPCMLSKENPADDNFSLVPKSPSKSISHICISDMCISVEKPTGEE
KTRNKPELVSITVREGERKEAFESLHYKTLTTEAYTPSENHTESFESGRKCEDDLDPLSN
FIILRKKHMTILSEPEVIVDEGHKEGYLKQESDTVVQLKSSPPCMTSKENSADDNFLLVS
KSPSKSILHICLSDMCTSVEKTTREEKTSSKTEELVSITVGEGERKDTFESLDYKTLTTE
AYTPSVNHTESFESGRKCEDDLDPLSNFIILRKKHMTILSEPEVIVDEGHKEGYLDQKSD
TVVQLKRSPCMASKEKPADDNFLLVPKSPLKSEPHICLSDMCTSVEKPTREEKIRSKTEE
CVSITIGEGERKDTFESLDYKTLTIEPYTPSVNHTESFEPSRKCEDDLDPLSNFIILRKN
HMTILSEPEVIVDEGHKEGYLDQKSDTVVHLQSSPSYMTSKEKSSDDNFSLVPESPSKSV
PHICLSDMCTSVEKPTREEKPRSKTEELVSITVEEGGKKDTYGSLDYKTLTIEPYTPSVN
HTESFKPGRKCEDDLDPLSNFIILRKKHMTILSEPEVIVDEGHKEGHLEQESDTVVQFKS
SPPCMTSKENSADDNFLLVSKSPSKNVPHICLSDMCTSVEKPTREEKPRSKTEELVSITV
EEGGKKDTYGSLDYKSLIIEPYNSSVNHTEFFEPSRKCEDDLDSLSNFIILRKNHMTILS
EPDVTMDESHKEGYLEQESDTVVQLKSSPPCMTSKENSAESKMKNKEEYTLILEEESLDV
CGELSSKKNQEKEINDVIEIQATDSQCQAYNLLEAVATPLLKELACHDSLPASNWKFATL
GFDQTRFFLKQQEKIINDVFLQGRNDESEVMFKQAALVHLLVTIRDILLMCTLDIALGYL
LKAKDVYKSILGSCLDNIGRQLEIVQFIRKKKPETNYKEQELYCQMLHLVQTNSTEEQQF
KMLIITRMDSDDEHCFLAEILSKIKGLECISLSPEKRKVLLESKDVLNSLKKCSCVIIHN
RYIGPDFPWTQFSFMIEYNYVENSCWTEHCKQLDIPYLAFKTVLPEGAFKESASLDRFGG
FLLEIQIPYVFLTSEGILNTPEILQLLESNYNITVVERCCSESLQQFGDTDRYVVVTIDE
CTAVIIQSLEELNCEKASDNFILKLIALSIQYSYCWIILYSKERLNSEYCLKGKTLHHLA
LIYAALVPFGSKSEELEVKLVIMPGVEETAQLIRQIADHVLMSSKREPHEWLDKSWLSIS
PSEDEMCLLDFPCINPLVAQLMLNKGPSLPWLLSATFDQLQGLLPEVPSKVLKHFVEITS
LFKIDSSLTKSPLISSSQENVYQPGTISSQCSTSSSPAFIIQGQDEYYCYPELYEKVPKD
ASPSSSCTTSLIGLSEMDCILPSSKSCEQMNYWENSNLNPKQLQNTDFFNNIESRRISGT
SFPRQDDSDPDDVFSAVLAQINYEARMTESVANSDCINYKEQNMHTTKGKIRKELDSPIF
LLGNSGYPATQNFKSNILKSQIHPPKLQYCREQSSYDAWLFKKDNLNTASTSFMFQQNYQ
SGELKDFIYDRLDAQTDKASWKELSAFSSVNSFAHNCSTYNLNATSEKFNNLFVQQTSGR
YSGQKRTSLNLAENKTLTDLIYSQRPQIKRRRLMCEKVPGRIDGQTRLKFF |
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| NT seq |
6276 nt +upstreamnt +downstreamnt
atgttcacagcattaaaatatcactcggtggactattcacatgagaatttgattagaaag
aaatcaagcattagatcattattacttcatattccttcatatttacatcctgatgagaat
aattgtcatgctggagctgttgatgaaaaattaaggaagccatggacaagtgtctcaatt
cccatatctctacaaatgaaggatttctcagttttggatgagtggaagacagttgtttct
gtggaggatgttcctgaaaagaagacagtttcatacaatatgcctcatatttatgacttt
gaagaagttgttccaagttcgaatccatcctctcaaactgacatagagaagagcttttta
tttactccaaatgaagtctttcaccgtgtcacttattctgagacttgcccagcacttcaa
acaaccaatcaaaatttatatattgatgatgaaataatttttataaatagtttggcggaa
tataaaaagcagttacctacagtgtctaccctcttgagtagactaaaagtgtttttatta
aaagatccttgtttagatttcaaagaacaacagatgctcatggaagctgatcatttcaga
tcacgtatccattttgacgttattttgaaagaagaattatatatgattaaggagctattc
aaagatgaaaaacaattcattttgcaagttaaatctgaattattgaaacctgttagcctg
caagaaagaacagatatacaaacaatctcagaacttaagaagtctctaaaatcagctcca
gaaataatcggtcatgtaattgaaaatgaaaagctctttgaaagagaggacttggaaatg
cctttaaatcctccatatccaataacccaacgtatcctcgtaaatccgatacatgccgga
cttcaaacagatcaacttgctcctgtttataaaatgaaatttactccagcagaaagttgc
actaagaaatgcagggtggaaccatggtcaaaaaagtatcaaagttccctggactcttgt
ttacttacagtgccacaaactgaagagcctgtaattcactattcaattagagatttgaaa
agaatgttttctgttgaggtagaaattcttatgcttgactctttaaaagaaaaatggtgg
aaacaaggactgaacatgataaaaatagataccttggaacatcttattccagatttgtgt
catcacaacctacttcaaactcaaatggagatattgcctataaaaccagttcagctagag
tggtatcttgaaaaagaaagtgatactgttgttcaactcaaaagctctccttgtatgctt
tctaaagagaatcctgcagatgataatttctcacttgttccaaagagtccttcaaaaagc
atatcacatatctgtatttctgatatgtgtatatctgttgaaaaaccaacaggagaagaa
aaaacaaggaataaaccagaactagtttctataacagtcagagagggagaaagaaaagaa
gcttttgaatcactacactacaaaacattaaccactgaggcatacaccccatcagaaaat
catactgaatcttttgaatctggtagaaaatgtgaggatgatttggatcctttgagcaac
tttatcattctgagaaaaaaacatatgaccatcctgtcagaacctgaagttattgtggat
gagggccacaaagaagggtatcttaaacaagaaagtgatactgttgttcaactcaaaagc
tctcctccttgtatgacttctaaagagaattctgcagatgataatttcttacttgtttca
aagagtccttcaaaaagtatactacatatttgtctttctgatatgtgtacatctgtcgaa
aaaacaacaagagaagaaaaaacaagtagtaaaacagaagaactagtttctataacagtt
ggagagggagaaagaaaagatacttttgaatcactagactacaaaacattaaccactgag
gcatacaccccatcagtaaatcatactgaatcttttgaatctggtagaaaatgtgaggat
gatttggatcctttgagcaactttatcattctgagaaaaaaacatatgaccatcctatca
gaacctgaagttattgtggatgagggccacaaagaagggtatcttgatcaaaaaagtgat
actgttgttcaactcaaaaggtctccttgtatggcttctaaagagaaacctgcagatgat
aatttcttacttgttccaaagagtcctttaaaaagtgaaccacatatctgtctttctgat
atgtgtacatctgtggaaaagccaacaagagaagaaaaaataaggagcaaaacagaagaa
tgcgtttctataacaattggagagggagaaagaaaagatacttttgaatcactagactac
aaaacattaaccattgaaccatacaccccatcagtaaatcatactgaatcttttgaacct
agtagaaaatgtgaggatgatttagatcctttgagcaactttatcattctgagaaaaaac
catatgacaattctgtcagaacctgaagttattgtggatgagggccacaaagaagggtat
cttgatcaaaaaagcgatactgttgttcacctccaaagctctccttcttatatgacttct
aaagagaaatcttcagatgataatttctcacttgttccagagagtccttcaaaaagtgta
ccacatatctgtctttctgatatgtgtacatctgttgaaaaaccaacaagagaagaaaaa
ccaaggagtaaaacagaagaattagtttctataacagttgaagagggagggaaaaaagat
acttatggatcactagactataaaacattaaccattgaaccatacaccccatcagtaaat
catactgaatcttttaaacctggtagaaaatgtgaggatgatttggatcctttgagcaac
tttatcattctgagaaaaaaacatatgaccatcctgtcagaacctgaagttattgtggat
gagggccacaaagaagggcatcttgaacaagaaagtgatactgttgttcaattcaaaagc
tctcctccttgtatgacttctaaagagaattctgcagatgataatttcttacttgtttca
aagagtccttcaaaaaatgtaccacatatctgtctttctgatatgtgtacatcagttgaa
aaaccaacaagagaagaaaaaccaaggagtaaaacagaagaattagtttctataacagtt
gaagagggagggaaaaaagatacttatggatcactagattacaaatcattaataattgaa
ccatacaactcatcagtaaatcatactgaattttttgaacctagtagaaagtgtgaggat
gatttggattctttgagcaactttattattctgaggaaaaaccatatgaccatcctgtca
gaacctgacgttactatggatgagagtcacaaagaagggtatcttgaacaagaaagtgat
actgttgttcaactcaaaagctctcctccttgtatgacttctaaggagaattctgcagaa
tccaaaatgaaaaacaaagaggaatatactttgattctcgaagaagaaagtcttgatgtt
tgtggagagctatcctctaaaaagaatcaagaaaaggaaataaatgatgtcattgaaatt
caagcaacagacagccaatgccaagcatataaccttttagaagcagttgcgaccccttta
ttaaaagaacttgcttgccatgatagtcttcctgcatcaaactggaaatttgccactctt
ggctttgaccaaactagatttttcttaaagcaacaagaaaaaataataaatgatgttttt
cttcaaggtagaaatgatgaaagcgaagtaatgttcaaacaggcagcactggtccatctt
ttggtaacaattcgagatattctcttaatgtgtaccttggacatagcattgggatattta
ctgaaagcaaaagatgtctacaaaagtatattaggttcctgtttggataatattgggaga
cagcttgagattgtacaatttatcaggaagaaaaagcctgaaaccaactacaaagaacaa
gaattatattgccaaatgttacatttggtacaaacaaacagtacagaagagcagcaattt
aagatgttaattataacaagaatggactcagatgatgaacattgtttccttgctgaaata
cttagcaaaataaaaggtttagaatgtatttctttatctcctgaaaaaagaaaagtttta
ctggaatccaaagatgttttaaatagcctcaagaagtgttcctgtgtgattatacataat
cgatatattggacctgatttcccctggactcagttctcattcatgatagaatataattat
gtagaaaactcttgctggactgaacattgtaaacaattggatattccttacctggccttt
aaaacagttctcccagaaggagcttttaaagaaagtgcctcactggacagatttggtggt
tttcttttggaaattcaaatcccatatgtgtttctcacatctgaaggaattcttaacaca
ccagaaatacttcagctactagaatcaaactacaatataactgtagtggaaagatgttgc
agtgagtccttacagcagtttggggatacagatcgttatgtggtagtaacaattgatgag
tgcacagccgtaattattcagagtctggaagagctgaattgtgaaaaggcatcagataac
ttcattttgaaattgatagcattatcaattcaatatagctattgttggatcattttatac
tccaaggaaagactgaattcagagtactgccttaaaggaaaaacgcttcatcacctagca
ctgatctatgcagctttggttccatttgggtcgaaatctgaagaattggaagtgaagctt
gttattatgccaggagtagaagaaactgcacagctaattcgccaaattgctgaccacgtc
ttgatgtcctctaagagagagcctcatgaatggctggacaaatcttggctttcaatctca
ccatctgaagatgaaatgtgtttacttgattttccatgtatcaatcccttggtggctcag
cttatgttaaacaaaggcccttcactgccttggctgctatctgcaacttttgatcaactt
caaggacttttacctgaagttccctccaaagtgttaaagcactttgttgagattacttct
ttgttcaagattgactcatccctcacaaagtcacctttaatttcatcatctcaagaaaat
gtatatcaacctggcaccatctcttctcagtgttcaacctcaagttctccagcattcatc
attcaaggacaggatgagtattattgttatccagaattatatgaaaaagttcctaaagat
gcaagtccctcttcaagttgtaccacttctctcataggcctaagtgaaatggattgtatt
ttaccatcttcaaaatcttgtgaacagatgaactactgggaaaattccaatttgaaccca
aagcaactacaaaatactgatttttttaataacatagaatccagaagaatatctggtact
tccttcccaagacaggatgattcagacccagatgatgtcttttctgcagtactagctcaa
ataaattatgaagcaagaatgactgagagtgttgctaactctgattgcataaactacaag
gaacaaaacatgcatacaacaaaaggaaaaataagaaaagaattggattcccccatcttt
ttactagggaattctgggtatcctgcaacccagaattttaagagcaatatattaaaatca
caaatccatcctcccaaattgcagtactgtagagaacaaagttcatatgatgcatggctc
tttaaaaaagataatttaaatacagcctctacctcctttatgtttcaacaaaattatcaa
tctggtgaattaaaagatttcatatatgacaggctagatgctcagacagataaggcttcc
tggaaagaattatcagctttctccagtgtgaattcatttgcacataattgcagtacctat
aatttaaatgcaacttcagaaaaattcaataatctgtttgtccagcaaacatctgggaga
tattcaggacagaagagaacttcattgaatttagcagagaataaaacattaacagatttg
atatattcacagagaccccaaatcaaaagaaggcgtcttatgtgtgaaaaagtccctgga
agaatcgatggccaaacacgccttaagttcttttga |
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