Sarcophilus harrisii (Tasmanian devil): 100923300
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Entry
100923300 CDS
T02286
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03050
Proteasome
shr05010
Alzheimer disease
shr05012
Parkinson disease
shr05014
Amyotrophic lateral sclerosis
shr05016
Huntington disease
shr05017
Spinocerebellar ataxia
shr05020
Prion disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100923300 (PSMC6)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100923300 (PSMC6)
09164 Neurodegenerative disease
05010 Alzheimer disease
100923300 (PSMC6)
05012 Parkinson disease
100923300 (PSMC6)
05014 Amyotrophic lateral sclerosis
100923300 (PSMC6)
05016 Huntington disease
100923300 (PSMC6)
05017 Spinocerebellar ataxia
100923300 (PSMC6)
05020 Prion disease
100923300 (PSMC6)
05022 Pathways of neurodegeneration - multiple diseases
100923300 (PSMC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
shr03051
]
100923300 (PSMC6)
Proteasome [BR:
shr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
100923300 (PSMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
AAA_22
AAA_5
RuvB_N
OB_PRS7
nSTAND3
AAA_14
Prot_ATP_ID_OB_N
DUF815
AAA_7
AAA_11
Phage_scaffold
TIP49
RNA_helicase
AAA_33
TPR_MLP1_2
AAA_3
NPHP3_N
AAA_18
Mg_chelatase
bpMoxR
DUF5906
DUF3829_2nd
AAA_28
AAA_lid_PRS2_C
Csa3_N
TsaE
Mua
CLIP1
Vpar_1526
NACHT
AAA_24
AAA_25
Occludin_ELL
AAA_17
Parvo_NS1
MC5
IstB_IS21
ApoB100_4ins
DUF4140
Med4
Neur
Motif
Other DBs
NCBI-GeneID:
100923300
NCBI-ProteinID:
XP_031808697
Ensembl:
ENSSHAG00000006344
UniProt:
A0A7N4P8Y5
LinkDB
All DBs
Position
2:330220679..330249613
Genome browser
AA seq
403 aa
AA seq
DB search
MDIPSIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggacattcccagcatcccctatgagaggcgtcttctcatcatggcggacccgagagat
aaggctcttcaggactaccgtaaaaaactgcttgagcacaaggagatcgatgggcgtctc
aaagagttaagagaacagttgaaagaacttaccaagcaatatgaaaagtctgaaaatgat
ctgaaggccttacaaagtgttgggcagattgtgggtgaagtacttaagcaattaacagaa
gaaaaattcattgttaaagcaacaaatggaccaagatatgttgtgggttgtcggcgtcag
cttgacaaaagtaagctgaaaccagggacaagagttgctctggatatgactacactaact
atcatgagatacctgccaagagaagttgatccactggtttataacatgtctcatgaagac
cctgggaatgtttcttattctgagattggaggactatctgaacaaatcagagaattgaga
gaggtaatagaattaccccttacaaaccctgagttattccagcgagtaggaataatacct
ccaaaaggttgtttgttatatggaccaccaggaacaggaaaaacactcttggcaagagct
gttgctagccagctggattgcaattttttaaaggttgtatccagttccattgtagacaag
tatattggtgaaagtgctcgtttgatcagagaaatgttcaattatgccagggatcaccag
ccatgcatcattttcatggatgaaattgatgctattggtggccgtcgtttttctgagggt
acttcagctgatagagaaattcagagaaccctaatggagttactaaatcagatggatgga
tttgatactttacacagagtaaaaatgatcatggctacaaacagaccagacacattggat
cctgctttattgcgtccgggaagattagatagaaaaatacatattgatttaccaaatgaa
caagcaagattagacatactcaagattcatgcaggtcctatcacaaaacatggtgaaata
gattatgaagcaattgtgaagctctcagatggctttaatggagcagatctgagaaatgtt
tgcactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagtacaggaagat
ttcatgaaagcagtaagaaaagtggctgattctaagaagttggaatctaaacttgactat
aaacctgtctaa
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