Sarcophilus harrisii (Tasmanian devil): 100923313
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Entry
100923313 CDS
T02286
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100923313 (CHD7)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100923313 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
100923313
NCBI-ProteinID:
XP_031802224
Ensembl:
ENSSHAG00000011522
UniProt:
G3WDH6
LinkDB
All DBs
Position
1:complement(460661309..460889276)
Genome browser
AA seq
2999 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQSSLHHPPTN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMMSNTPGNGIASPHSQYHNPPVPQVPHGGSSG
GQMGVYPGMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQPPQPPQTPSGAPGQG
HPPHMQQMGNYMARGDFSMQQHGQPQQRMNQFSQGQEGLNQGNPFIASSGPGHLSHVPQQ
NPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNPSVPRYPNAVGFPSNSGQGL
MHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIP
MEVGNYPNIPHPQPSHQPPGTMGIGQRNMGPRNMQQSRPFMGMSSTPREISGHMRPNGCP
GVGLADPQAIQDRLIPGQQHPGQPPSFQQLPTCPPMQPHPGMHHQSSPPPHPHHQPWAQL
HQSPQNTPQKVPVHQHSPSEPFLEKPVPEMTQVSGPKAQLVKTDDYLPSVEQQPQQKKKK
KKNNHIVAEDPSKSFGQDDFPGGKDSQELARNSVDGSQEEKKKKKKPKAKRDPKESKEPK
EKKEPKEPKTPKTPKIPKEPKEKKAKNTTPKPKSNKKTSNKKPDSEASALKKKINKGKTE
GSENSDLERTPPPSPPPEEDDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGR
DSPSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQW
ASIEDLDKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRILDFARSTDDNGEP
VTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFERLMSREPETERVERPPADDWKKSESSR
EYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFL
VIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAI
ITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPTRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLING
AEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLD
ILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQ
SMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITI
ESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRK
QTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGWGR
WTDILSHGRYKRQLTEQDVETICRTILVYCLHHYKGDENIKSFIWDLITPTADGQTRALV
NHSGLSAPVPRGRKGKKVKTQSAQPVLQDADWLASCNPDALFQEDSYKKHLKHHCNKVLL
RVRMLYYLRQEVIGDQADKILEGADSSETDVWIPEPFHAEVPTDWWDKEADKSLLIGVYK
HGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPT
RTPFKDEIDEFANSPPEEKEESMEIHTTGKHSESNAELGQLYWPNTSTLTTRLRRLITAY
QRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVST
FGIIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFNCFVAMCRRVCRMPAKPDDEPPDLS
SMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKDL
LVGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGTGSVSSLNPLATGFSQTPPVISST
HIQDEKTTEPAEIKVEESDHPVVKEKPEVEEEEADPGEKDMKQECEVETSSIKSETKDIE
ISADADPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGTASQGKNFDEESNASMSTARDE
TRDGFYMEDGDPSVAQLLHERTFTFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDF
QGLMPGYASTAVDSPLQKRTFTELSMIGQASISGSEDIAASPQLSKEDALNLSVPRQRRR
RRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSVT
SKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLMDGEPPMKRRRGRRKNVEGL
DLLFMSNKRTSLSVEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLVG
EDAPKNKDLVDWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLDINTLT
GEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDR
LLTGPVVREEGASRRGRRPKSEIAKAAAAAAAAASTSGINPLLMNSLFAGMDLTSLQSLQ
NLQSLQLAGLMGFPPGLATAAAAAAAAGGDSKNPATMLPLVLPGMAGLPNMFGLGGLLNN
PLSAATGNTTTASSQGEPEDGTSKVEEKGNENEEENKDSEKSTDTVSATDSANGSVSAAT
ATAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSSDDKA
ADKAEGVPFKDEEHLEGSDAEESLDKTADSSILEDEIAQGEELDSLDGGDEIENNENDE
NT seq
9000 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctttttggagaggatggaaatattttcagtgaaggg
ctggaaggccttggagaatgtggttatcctgaaaatccagtcaatcctatgggtcagcaa
atgcctatagaccaaggttttgcctctttgcagtcctctcttcatcatcctcctaccaat
caaaatcaagcaaagttgacccactttgatcactataatcagtatgaacagcaaaagatg
catctgatggatcagcctaacagaatgatgagtaatacccctgggaatggtatagcctct
cctcattcacagtatcacaaccctccagttcctcaggttcctcatggtggcagtagtggt
ggtcagatgggagtttatcctggcatgcagaatgaaaggcatggacagccttttgtggac
agtggctctatgtggggaccacgggctgttcaggtgccagaccagataagagccccttac
cagcaacagcagcaaccaccccagccaccgcagactccatctggagcccctggacagggc
catcctccacacatgcaacagatggggaactatatggctcgtggtgatttttcaatgcag
cagcatggtcaaccacaacagaggatgaaccagttttctcaaggtcaagaaggccttaat
cagggaaatccttttattgcctcctcaggacctggccacttgtctcatgtgccccaacag
aatcccagcatggcaccttctttacgtcactcagtccaacagtttcatcaccatcccccc
actgctctccatggagaatcagtcgctcacagtcccagattctcccctaatcctcctcaa
caaggggctgttaggccacaaacccttaattttagttctcggagccagacagtaccctct
cctactataaacaactcagggcagtattctcgatatccttacagtaacctaaatcaggga
ttagttaacaatacagggatgaatcaaaatttaggccttacaaataacactccaatgaat
ccgtctgtaccaagatacccaaatgctgtaggatttccatcaaacagtggtcaaggacta
atgcaccagcagcccattcaccccagtggctcacttaaccaaatgaacacacaaactatg
catccttcacagcctcagggaacttatgcctctccacctcccatgtcacccatgaaagca
atgagtaatccggcaggtacccctcctccacaagttagacccggtagtgctggaataccc
atggaagttggcaattatccaaatattccccaccctcagccatcacaccagccccctggc
accatgggaattggacagaggaatatgggccccagaaacatgcaacagtctcgtccattt
atgggcatgtcctcaacaccacgggaaattagcgggcacatgagaccaaatggttgtcct
ggtgttggccttgcagatccacaagcaatacaagatcgtttgatacctggccaacagcac
cctggtcagcccccatcttttcaacagttgccaacctgtcctccaatgcagccccatcca
gggatgcaccaccagtcttcaccacctccacatccacatcaccagccttgggcacagctt
caccagtcaccccagaacaccccccagaaagtgcctgtccatcaacattctccatcagaa
ccttttctagagaaaccggtgccagagatgactcaggttagtggaccgaaggcccaacta
gtgaagactgatgattacctaccatctgtggagcaacagccgcaacaaaagaaaaagaaa
aagaaaaacaatcatattgttgcagaggatcccagtaaaagttttggtcaagatgatttc
cctggtggtaaagacagccaggagctagccaggaactcagtagatgggtcccaggaagag
aaaaagaaaaagaaaaaacccaaggcaaaaagagatccgaaggagtctaaggaacccaag
gagaaaaaagagcctaaggaacccaagaccccgaaaacccctaagatccccaaagagcca
aaggaaaagaaagcaaaaaataccacaccaaaacccaagtctaacaaaaagaccagtaat
aagaaaccagattctgaagcaagtgctttgaagaaaaaaatcaacaagggaaaaacagaa
ggttctgaaaactcagatttagaaagaactccaccaccatctcctcctcctgaagaagat
gatgacccaggtgttcagaagagacgctctagcaggcaggttaaaagaaagcgttacaca
gaagacctggagttcaagatttctgatgaggaggcagatgatgcagatgctgctgggaga
gactccccttcaaacacctcacagtccgagcagcaggaatctgttgatgcagagggtccc
gtagtagagaaaatcatgagtagtcgatcagtcaaaaaacagaaggagtctggagaggag
gtggaagtagaggaattctatgtgaaatacaaaaacttctcttaccttcactgtcagtgg
gcatccatagaagacctggacaaagacaagaggattcaacaaaagattaagcgatttaag
gcaaagcagggccagaacaaattcctttcagagatcgaagatgaactttttaatccagat
tatgtagaagttgatcggatactggattttgcacgaagcacagatgataatggagagcct
gtgactcattatctggtgaagtggtgttcacttccatatgaagacagcacttgggagtta
aagcaggacatagaccaagctaaaattgaagaatttgagagactgatgtcccgggaacca
gaaacagaacgtgtggagcgacctcctgctgatgattggaagaaatcagaaagttccagg
gagtataaaaacaataacaaactcagggaataccagttggagggagtaaactggttactt
ttcaattggtacaacacgagaaactgcattttagcagatgagatgggtttgggaaaaact
atccagtccattacatttctctatgagatatatttgaaaggaatacatggccctttccta
gtaattgccccattgtccacaatccccaactgggaaagagaattccgtacctggacggag
ttgaatgtggttgtgtatcatgggagtcaagctagtcgccggaccattcagttgtatgaa
atgtacttcaaagatccacagggtcgagttataaaggggtcatacaagtttcatgccatc
attactacatttgagatgatcttaactgattgtcctgagctgcggaacattccatggcgc
tgtgtagtcattgatgaagcccataggctgaagaataggaattgtaaactgttggaggga
cttaaaatgatggacctggaacacaaggtgctgctgactggtactccattacagaataca
gtagaagagctctttagcttgcttcatttcttagaaccaactcgctttccttcagaaacc
actttcatgcaagaatttggtgatctgaaaacagaagagcaggtgcaaaagcttcaagct
attctgaagccaatgatgttgagacgcctcaaggaggatgtggaaaaaaatttggccccc
aaagaagaaactattattgaagttgaattaacaaacattcaaaagaaatactatcgtgcc
atcctggagaagaacttcacatttctctccaaagggggtggtcaggctaatgtccctaac
cttttaaacactatgatggaattgagaaaatgctgcaatcatccataccttattaatggt
gctgaagagaaaattttggaagagtttaaagaaacacacaatgcagactctccagatttt
cagctccaggcaatgatccaggctgctggcaagctagtgctgattgacaagctgctgcca
aaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggac
atactggaagactacctcattcaaagacggtacccatatgaaagaattgatggccgagta
agaggcaaccttcgtcaggcagctattgacaggttttctaggcctgattctgataggttc
gttttcctcctgtgtacaagagcaggaggtttgggcattaatctgactgctgctgatacc
tgcatcatctttgattcagactggaatccccaaaatgatcttcaggcccaggctagatgt
cacagaataggacaaagcaaatctgtaaaaatctacagattaatcacaagaaactcttat
gaaagagaaatgtttgacaaggcaagcttgaaacttggcctggataaagctgttttacag
tccatgagtggaagagaaaatgctacaaatggggtgcagcagctttccaagaaagaaata
gaagatcttctacgcaaaggtgcttatggtgcacttatggatgaagaggatgaagggtct
aaattctgtgaagaagatattgatcagatccttctgaggcggacacacaccattactatt
gagtctgaagggaagggctctacatttgctaaggctagttttgttgcatctggaaataga
acagacatatccttggatgatccaaatttttggcagaagtgggctaaaaaagctgaatta
gatattgatgctttaaatggacgaaacaatctggttattgacactccaagagtgaggaag
caaactagactttatagcgctgtgaaagaagatgagctgatggaattttcagatttggaa
agtgattcagaagaaaagcctagcacaaagccccggagacctcaggacaagtcacagggt
tatgcaaggagtgaatgctttagagttgaaaagaatcttctagtttatggttggggtcgg
tggactgacatcctttctcatggacgttacaaacgtcaactaactgaacaagatgtggaa
accatctgccgtaccatccttgtctactgtctccatcattacaaaggggatgaaaatatc
aaaagcttcatttgggatctgatcactccaacagctgatggccagacccgggccttggtt
aatcattctggcttatcagcaccagtgccaaggggaaggaagggaaagaaagtgaaaacc
cagagtgcacagccagtgctgcaagatgctgattggctggcaagctgcaacccagatgcc
ttgtttcaggaggatagctataagaaacatttgaaacatcactgtaacaaggtcctgctg
cgtgtccgcatgctgtactatctaagacaagaagtgataggggaccaggcagataagatc
ttagagggtgctgactcaagtgaaacagatgtatggatacctgaacctttccatgctgaa
gttcctacagattggtgggataaggaagcagataaatccctcttaattggagtgtacaaa
catggctatgagaagtacaattctatgagagctgacccagcactgtgttttctggaacgg
gttggcatgcctgatgccaaggccatagctgctgagcaaagaggaacagacatgttagca
gatggtggtgatgggggagaatttgaccgagaagatgaagaccctgaatacaaaccaacc
agaacacccttcaaggatgaaatagatgaatttgcaaattcacctccagaggaaaaagaa
gaatctatggagatacatactacaggcaagcacagtgaaagtaatgccgagttaggccaa
ctttactggcctaacacctcaaccctgactacccgtctgcgccgcctcattactgcctat
cagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgacga
aggcgtcgtcctcgggaggaagtgagagccctggaagcagaaagagaagctattatatct
gaaaaacgtcaaaaatggacaagaagagaagaggcagatttttaccgtgtagtttctact
tttggaattatttttgatcctatgaaacaacagtttgactggaaccaattccgagccttt
gccagacttgacaaaaagtctgatgagagtttagagaaatatttcaactgttttgtagcc
atgtgtaggcgagtatgccgaatgccagcaaagccagatgatgaaccacctgatctctct
tccatgattgagcccatcactgaagagcgtgcctctagaactttataccgcatagaactg
ttgaggaaaataagagaacaagttcttcatcatcctcagctgggagaaaggctaaaactc
tgccagccaagcttggatttgccagagtggtgggagtgcggtaaacatgacaaagatcta
ttggttggtgctgctaaacatggagttagtaggacagattatcatatcttgaatgatcct
gagttgtccttcttagatgcccataaaaactttgctcaaaatagaggaacaggtagtgta
tcttccttaaacccactggctactggattcagtcagactcctccagttatctcatcaacc
cacattcaagatgaaaagactacagaaccagctgaaattaaagtagaggagtctgaccat
ccagtggtcaaagaaaaacctgaggttgaggaagaggaagccgatcctggagaaaaagac
atgaagcaggaatgtgaggttgagacatcttctattaaaagtgaaacaaaggatatcgaa
attagtgcagatgcagatccaaagtctatttcagaaaaaggttctgaagaagatgaagaa
gaaaaattagatgatgatgataaatcagaagagtcttcacagcctgaagcaggaactgct
tctcaggggaagaattttgatgaagaaagcaatgcatctatgagcactgcccgggatgag
acccgggatggattttatatggaggatggagatccttctgtagctcagctccttcatgaa
agaactttcactttttctttttggcctaaggatcgtgtaatgataaaccgattagataac
atctgtgaagcagtgttgaaagggaagtggccagtaaacagacgccagatgtttgatttc
cagggacttatgcctggttatgcatcaacagctgtggacagccccttacagaaaaggacc
tttacagagctttcaatgattggtcaagctagcatcagtggtagtgaggacattgctgct
tctcctcaattgtcaaaggaagatgcactcaacctatcagtccctcgtcagaggaggaga
aggaggagaaaaatagaaattgaggctgaaagagctgccaagcggcggaatctcatggag
atggtggctcagctgcgggagtctcaggtggtctcagaaaatggacaagaaaaagttgta
gatttatcaaaggcctcacgagaggcaacaagttctacctcaaatttttcatctgttact
tcaaagtttatcttgcctaatgtctctacacccgtgtctgatgcctttaaaactcaaatg
gaactgctacaggcaggtctctcacgcacacccacaaggcatctgcttaatggctcctta
atggatggagaacctcccatgaagaggaggcgaggaaggaggaaaaatgtagaagggctt
gatctgcttttcatgagcaacaaacggacatcattgagtgtagaggatgctgaggtgacc
aaagcttttgaagaagatatagagaccccaccaacacggaacattccctctcctggacag
ctggacccagacactcgcatccctgtcatcaacctagaagatgggaccagattggttggg
gaagatgcccctaaaaacaaggatttagttgactggcttaaactacatcctacctacact
gttgatatgccaagttatgtaccaaagagtgcggatgtgctgttttccccatttcaaaaa
ccgaaacagaaacgacatagatgtcgaaaccctaacaaattggatatcaacaccttgacg
ggagaagaaagggtacctgttgtaaataaacgaaatggaaagaagatgggtggggctatg
gctcctccaatgaaggacttgcccaggtggttagaggaaaatcctgagtttgctgtggct
cctgattggactgatatagtaaagcagtctggtttcgttccagagtccatgtttgaccgt
cttctgacagggcctgttgtgagggaagagggggcaagtagaagagggagaaggccaaaa
agtgaaattgccaaagcagctgcggccgctgctgctgctgcctccacttcaggcatcaac
ccgctgctgatgaacagcctgtttgctgggatggatctcacgagccttcagagcctgcaa
aatctacagtctctgcaactggcaggtcttatgggcttccctccaggacttgcaacagct
gctgctgctgctgctgctgctggaggcgattctaagaatcctgccaccatgctccctctg
gtgttgccaggaatggcagggttgcccaacatgtttggacttggtgggctgttaaataac
ccactctcagctgctactggaaacaccactactgcttccagtcaaggagaacctgaagat
ggcacttcaaaagtggaagagaaaggaaatgagaatgaagaagagaacaaagactctgag
aaaagcacagatactgtttctgctactgactctgcaaatggatccgtcagtgctgctact
gccacagctggattgccctcaaaccctctagccttcaatcctttccttctgtccaccatg
gctccagggctgttctacccatccatgtttctacctccaggactgggaggattgacactg
cctggtttcccagcattagcaggacttcagaatgcagtgggttccagtgatgacaaggct
gctgacaaagctgagggagttccctttaaagatgaagaacacctcgaaggcagtgatgct
gaggaaagcctagataagactgcagattcctccattttagaagatgaaatagcacagggt
gaagaactagactcacttgatgggggggatgaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
