Sarcophilus harrisii (Tasmanian devil): 100923376
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Entry
100923376 CDS
T02286
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03083
Polycomb repressive complex
shr04980
Cobalamin transport and metabolism
shr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100923376 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
100923376 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100923376 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shr01009
]
100923376 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100923376 (HCFC1)
03029 Mitochondrial biogenesis [BR:
shr03029
]
100923376 (HCFC1)
Protein phosphatases and associated proteins [BR:
shr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100923376 (HCFC1)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
100923376 (HCFC1)
HMT complexes
COMPASS/SET1 complex
100923376 (HCFC1)
MLL-HCF complex
100923376 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
100923376 (HCFC1)
Mitochondrial biogenesis [BR:
shr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100923376 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
AXIN1_TNKS_BD
Motif
Other DBs
NCBI-GeneID:
100923376
NCBI-ProteinID:
XP_031800706
LinkDB
All DBs
Position
X:12681407..12709563
Genome browser
AA seq
2194 aa
AA seq
DB search
MASGLQQAVASASAASASSSSAAAATVAAGSSVAQLLQPRWKRVVGWSGPVPRPRHGHRA
VAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFG
GMVEYGKYSNDLYELQASRWEWKRLKAKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLAND
SEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKL
VIYGGMSGCRLGDLWTLDIETLTWNKPTLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVM
DDVKVATHEKEWKCTNTLACLNLDTMAWEAILMDTLEDNIPRARAGHCAVAINTRLYIWS
GRDGYRKAWNNQVCCKDLWYLETEKPPAPSRVQLVRANTNSLEVSWGAVPTADSYLLQLQ
KYDIPAAAAATSPAANPVPSVPINPPKSPAPAAAAPAVQPLAQVGITLLPQAAANPPTTT
TTIQVLPTVPGSPIPVPTTGRTQGVPAVLKVTGPQATAGTPLVTVRPASQPGKAPVTVTS
LPAGVRMVVPTQSAQGTVIGSNPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVK
TVAVSPGTTTLPATVKVASSPVMVSNPATRMLKTAAAQVGTSVSSAANTPTRPIITVHKS
GTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVT
GQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITTTQASGTGTKPTILGISSVSP
NTTKPGTTTIIKTIPMSAIITQSGATGVTSSPGIKSPITIITTKVMTSGTGTPAKIITAV
PKIATGHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTT
GVTTLGTVTGTVSTSLAGAGGHNTNASLATPITTLGTIATLSSQVINPTAITVSAAQTTL
TAAGGLTTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTTEQPTATVTIAE
SGQGDVQPGTVTLVCSNPPCETHETGTTNTATTTVVANLGGLQQPTQVQFVCDRQEAGAS
LVASAMGQPNGSVVRVCSNPPCEIHETGTTNTPTVVSANLTIPALLGAGQIVCSNPPCET
HETGTTNTATSSMAGQHMYSNPPGQPQDIGTANRAASNTAGQRVCSNPPCETHETGTTNT
ATTATSNMTGQRVCTNPPCETHETGTTSTATTAMSNMGSGQPATASQQRETHHTHTTNTP
TTARSNMGTGEPEGAQAPAKVPCQTHQTSATSTTMTVKATERPCPVAPRICPNPSCESGT
GTTGSVGPASQSSSASGGGTSTGLGQLAFISRQSEVQHTHTTNTPTTARSNMGAGEAIGV
QGPTKPSCQTHQTSSTSTTMTVKATEVLCLAASACSNPPCETHETGTTNTATTSNAGTLQ
QVCSNPPCETHETGTTHTATTATSNVGSNQPGQQIPASPHCETHQTTSTGTTMTVNFGVP
SSGASPSQKTLEAALASAAAPAPSPGQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPP
PAQGNQGEPENMQGESMNTTSSSTITTTVSSTQTRAVTTVTQSTPVPGPSVPNISSMTEM
PPDAMATETSVSATIAVAVTGTDAQEVALSATDILQPLEEIPAETEAPQQLLQPPSAPGG
EQTEGPSATHSPDLQAAVDMSGPGEPSPGQEAASSAVVTAVMVQPQPQPEVDQLSLPQEL
MAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGAGE
PMDTSDAAAVAQAELGHLTAEGQEGQPTSIPIVLTQQELAALVQQQQQLQEAQAQVHHHH
HHHHHLPTEALAPADSLNDPATESNGLSDLASAVTSTVALLPSTATESLAPSNTFVAPQP
VVASPAKLQAATALAEVANGIESPVGKPDPLPPPMKATAKKENQWFDVGVIKGTNMMVMH
YFLPPDDAPSDLYFSVPYQDDSGTIPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEI
SAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGEPKSS
APAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQ
ESSKESSSSKPASKRPLSSPEMKSAPKKSKADGQ
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcctgcagcaggcggtcgcctccgcctctgccgcctccgcctcgtcttcc
tctgctgccgccgctacggtagcggccggcagctctgtggctcagctcctgcagccgcgc
tggaagcgagtggtgggctggtcgggaccggtgcctcgaccccgccacggtcaccgcgcc
gtggccatcaaggagctcatcgtggtgtttggtggcggcaacgagggtatcgtggacgag
ttgcacgtgtataatacggcaaccaaccaatggtttatccccgcggttcgaggggacatt
cctccaggctgcgcagcctatggctttgtgtgtgatgggactcgcctgctggtgtttggt
gggatggtggaatatgggaagtacagcaacgacctctacgagctacaggcaagcaggtgg
gagtggaaaaggctgaaagcaaaggcccccaaaaatgggccccctccatgccctcggctt
gggcacagcttttctctcgtgggcaacaaatgctacctgtttgggggtttggctaatgac
agcgaggatcccaagaacaacattccgaggtacttgaatgacctatacatcttggagtta
aggccaggctctggcgtagtagcctgggacatccccattacttatggggtcctgccgccc
cccagggagtctcacacggctgtagtctatacagaaaaggacaacaagaaatccaaactg
gttatctacgggggaatgagtggctgcaggcttggggatctctggaccctggatattgag
accctgacctggaataaacctactctcagtggagtggctcctctgcctcgaagtcttcat
tctgccaccaccataggaaacaaaatgtatgtgtttggtggttgggttcctcttgttatg
gatgacgtcaaagtggccacacatgagaaggagtggaagtgcaccaacacactggcctgt
ctcaacttggacaccatggcctgggaagctattctgatggacacactggaagacaacatc
ccccgggctcgagctgggcactgtgcagtggctatcaatacccggctctatatctggagt
gggcgagacggttaccgaaaggcatggaataaccaagtctgctgtaaggacctctggtac
cttgagaccgaaaagcctcctgccccatcccgggtgcagctggtccgagccaacaccaac
tctctagaggtgagctggggagcggtgccaacagctgacagctatctcctgcagctccag
aagtatgacattcctgctgctgctgctgccacctcgcctgcagccaacccagttccatct
gtgcctatcaatccccccaagagccctgccccagctgcagcagcccctgccgtgcagcca
ctggcccaggttggcattacgctgctcccacaggcagctgcaaacccccccaccaccacc
accaccatccaggtcttgccgacagtgcctggcagccccatccctgtgcccaccacaggt
cggactcaaggtgtccctgctgttctcaaagtgactggcccccaagctacagcaggaact
cccctggtcactgttcgaccagccagccaacctgggaaagctccggttactgtgacttcg
ctgcctgctggtgtccgaatggttgtgccgacacagagtgcccaggggacagtaattggc
agcaatcctcagatgagcggtatggcggcattggcagcagcagctgcagccacccagaag
atccctccttcctcggctcccacagtactgagtgttcccgcagggaccaccattgttaaa
acagtagctgtgtctcctggaaccactacacttccagccacagtgaaagtggcctcctcc
ccagtcatggtgagcaaccctgccacccggatgttgaaaacggcagcagctcaagtgggc
acatcagtgtcatcagctgccaacactcccacccgccccatcatcactgttcacaagtca
ggcactgtgactgtggcccagcaagcccaggtggtgaccactgtggttggtggggtcacc
aaaaccatcactctggtgaaaagccccatctctgtcccggggggcagtgcactgatttct
aatctgggcaaagtgatgtcagttgttcagaccaaaccggttcagacctcagcggtcaca
ggccaggcatctactggccccgtgactcagatcatccagaccaaaggacccctgccagcg
gggaccattctgaagctggtaacgtcagcagatggcaagcctaccaccatcatcaccacc
actcaagctagcggaactggaaccaaacccaccatcttgggcatcagcagcgtctccccc
aacaccaccaaaccgggcactaccaccatcatcaaaaccatccccatgtcggctatcatc
acccagtccggagcgacgggtgtaaccagcagccctgggatcaaatctcccatcaccatc
attaccacaaaggtcatgacatcgggcacaggcacacctgccaaaatcatcactgctgtc
cccaaaattgctactggacacgggcagcagggtgtaacccaggtggtgctgaagggggcc
cctggacagccgggcacgatcctccgaacagttcccatgggtggggtgcggcttgtcact
ccagtcacagtatctgctgttaagccaactgtcactaccctggtggtgaagggcaccaca
ggagtcacaaccctcggcactgtgactggtacagtgtccaccagcctcgctggagcaggt
ggccataacaccaacgcctccctagctactcccatcaccaccctagggactattgccacc
ctttcaagccaagtgatcaatcctacagccattactgtgtcagctgcccagaccactctg
acggcggcaggagggctcaccacccccaccattaccatgcagcctgtctctcagcccact
caagtgacgctgattaccacacccagtggagtggaggcccagccagtgcatgacctccct
gtctccatcttggcctcacctacaacagagcagcccacagccacagtcacaatcgctgaa
tcaggccagggcgatgtgcagcctggcaccgtgacactagtgtgctccaaccccccctgc
gagacccatgagacgggcactactaatacagccaccacaactgtggtagcaaaccttggg
ggcctccagcagccaacccaggtccagtttgtttgtgacaggcaggaggcaggtgcctca
ttggtggcttcagcaatgggtcaaccgaatggcagcgtggtgcgggtctgttcaaatccc
ccctgtgagatccatgagacaggcaccaccaacactcccactgtggtcagtgccaaccta
accatccccgcactgctaggggcagggcagattgtgtgctccaaccccccttgtgagacc
catgagacaggtaccaccaacacggccacttctagtatggctgggcagcatatgtactcc
aaccccccaggccagccccaggacataggtaccgccaatagagccgcatccaacacggct
gggcaacgagtatgctccaaccccccatgtgagacccatgagacgggtaccaccaacaca
gccaccaccgccacatccaacatgactgggcagcgtgtgtgtacaaaccccccgtgtgag
acccatgagacaggaaccaccagcactgccactactgccatgtccaacatgggctcaggg
cagccagcaactgccagccagcagcgtgagacacatcacactcacacaaccaacaccccc
accacagcccgatctaatatgggcactggggagcccgagggagcgcaggctcctgccaag
gttccatgccaaacccatcagaccagcgcaaccagcaccaccatgactgtgaaagctaca
gagagaccatgcccagttgctccccggatttgccccaatccatcctgtgagtctggcacc
ggcaccacaggttctgtggggccggcatctcagagcagctcagctagtgggggtggtacc
agcacaggcttagggcaactagccttcatcagccggcagtctgaggtacagcatacccat
acaacaaacaccccgactacagcccggtccaatatgggcgctggggaggctattggggta
caggggcccacaaagccctcatgccaaacacatcagaccagttccaccagcaccactatg
actgtgaaagccacagaggtgctttgcctggctgcttctgcctgttccaacccaccttgt
gaaacgcatgagactggtaccaccaatacagccactacctcgaatgcaggcactctccag
caggtgtgctccaatccaccctgtgagacccacgagactggtaccacacatacggccacc
actgccacctccaatgtaggctccaatcagcctgggcagcagatacctgctagccctcat
tgtgagactcaccagaccacctccactggcaccaccatgacagtcaactttggtgtccca
tcctctggggccagcccctcccagaagaccctggaggcagccttagcttctgcagcagca
ccagccccttccccagggcagagggtgtgttccaaccccccctgtgaaacccatgagaca
ggcaccacacatacggccaccactgtcacctcaaatatgagctcaaaccaagacccaccg
ccagctcaaggcaatcaaggggagccggagaacatgcagggagaaagcatgaacaccacc
agctccagcactatcaccacaacagtttcttccactcagacccgcgctgtgactaccgtg
acacagtccacgccagttcctggtccttcagtgccgaacatctcatcgatgacggagatg
cctcccgatgccatggctacagaaacgtctgtctcagctacaatagcagtggctgtgact
ggcacagacgcacaagaggtggccctttcggccacagacatcctccagcccttagaagag
atcccagctgagacggaagctccgcagcagctcttacagcctccctctgctcctggagga
gagcagaccgagggcccgtcagctactcacagtcctgatctacaggcagcggtggacatg
agcggacctggggagccctccccaggccaggaggctgccagctccgctgtagtgacagcc
gttatggtccagccgcagccacagcccgaagtggaccaattgtccctgccccaagagctg
atggctgaggctcaggctggcactacaacccttatggttacaggccttaccccagaggaa
ctggcagtgacagcagcagctgaggctgcagcccaggcagcagctactgaagaagcccag
gccctggcaatccaggctgtgctccaggcagctcagcaggccgtcatgggtgctggcgag
ccaatggacacatccgatgctgctgcagtggcacaggcagagctggggcacttgacagct
gagggccaggaggggcagcctacttctatccccattgtgctgacccagcaggaactggct
gctttggtacagcagcagcaacaattgcaggaggctcaggctcaggtgcaccaccaccat
caccaccaccaccacctgcctactgaggctctggccccggctgacagcctcaatgaccca
gccacagaaagtaatggcctcagtgacctagccagtgctgtcaccagcactgtggccctt
ctgccttccacagcaacagagagtttggctccatctaacacatttgtggctcctcagcca
gtggtggctagtccagcgaagctccaggcagctactgccctggctgaggtagctaatggc
atcgagtcaccagtggggaaacctgaccccttgcccccacctatgaaagccacagcaaag
aaagaaaaccagtggttcgatgttggggtcatcaaaggcaccaacatgatggtgatgcac
tatttcctgcccccagatgatgccccgagtgacttatatttttctgtcccttaccaggat
gactcgggcactatccctgactacaaccaactaaagaaacaagagctgcagccgggcaca
gcctacaagttccgagttgcaggcatcaatgcctgtggccgggggcccttcagtgaaatc
tcagcctttaagacttgtctgcctggctttcctggggctccctgtgccattaaaatcagt
aaaagcccagatggtgcacacctcacctgggagccaccctcagtgacctcgggcaagatc
attgagtactcagtatacctagccatccagagctcccaggcaggtgaaccgaaaagctcg
gccccagctcagttggccttcatgcgggtctattgtgggcccaacccatcctgcttggtg
cagtcctccagcctctccaatgcccacatagactataccaccaagcccgccatcatcttc
cgaattgctgcccgcaatgaaaagggctacggccctgccacacaagtcaggtggttacaa
gaatctagcaaagagagttccagctccaagcctgccagcaagcggcccttgtcctcacca
gaaatgaaatctgctccaaagaaatccaaggcagatggccagtga
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integrated database retrieval system
