Sarcophilus harrisii (Tasmanian devil): 100923444
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Entry
100923444 CDS
T02286
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04082
Neuroactive ligand signaling
shr04721
Synaptic vesicle cycle
shr04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100923444 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100923444 (SLC6A4)
04721 Synaptic vesicle cycle
100923444 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100923444 (SLC6A4)
Transporters [BR:
shr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100923444 (SLC6A4)
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Motif
Pfam:
SNF
5HT_transport_N
DUF8620
Motif
Other DBs
NCBI-GeneID:
100923444
NCBI-ProteinID:
XP_023359468
Ensembl:
ENSSHAG00000003899
UniProt:
A0A7N4P934
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Position
4:complement(436834673..436891854)
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AA seq
630 aa
AA seq
DB search
METTPLDSKKGQSACKDGEDCQKNGILQKGLTSPGDKAEAGQISNGYSAVQSSGEEGDAQ
NSNTADNTALDTEVHPGERETWTKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIFKGIGFAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCENPWNTDNCTNYFSEGNITWTSHSISPAEEFYTRHVLQIH
KSQGLDDVGGISWQLALCIMLIFTIVYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSIVNCMTSFMSGFVIFTVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPAA
TFFAIIFFLMIITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWFVLAVVITCFFGSLST
LTFGGAYVVKLLEEYATGPAVLTVVFLEAIAVSWFYGINQFCSDVKEMLGFSPGWFWRIC
WVAISPIFLLFIICSFLSSPPELRLFNYNYPRWTVLLGYCIGTSSFICIPTYITYRLIVT
PGTFKERVLKSITPETPTEIPFGDLRLNTV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccccactggattctaaaaaagggcagtcagcctgcaaggatggagaagac
tgtcagaaaaatggcattctacagaagggactcactagtccaggggacaaggcggaagca
ggacaaatctcaaatgggtactcagccgttcagagctcaggtgaggaaggggatgcccaa
aactccaacacagctgataacactgccctagacactgaagtccatcctggggagcgagag
acctggaccaaaaagatggacttcctcctctcagtcatcggctatgctgtggacctgggc
aacgtgtggcgcttcccatatatatgctaccaaaatggaggaggggccttccttatcccc
tacaccatcatggccatttttggtgggattcctctgttctatatggagctggctctgggc
caatatcatcgaaatggctgcatttcaatatggaagaaaatttgccccattttcaaaggg
attggcttcgccatttgcatcatcgccttttacatcgcctcctactataacaccatcatg
gcctgggctctctactacctcatctcttcctttacggatcaactgccttggaccagctgt
gagaacccctggaacaccgacaattgcaccaactacttttcggaaggcaacatcacctgg
acttcccactccatatcacctgctgaagaattttatacgcgccatgtcttacagatccat
aagtctcaaggactagatgacgtggggggcattagctggcaactggccctctgtataatg
ttgatcttcactattgtctactttagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgacggctactttcccttatatcatcctgtccatcctgcttgtaaggggggcc
acgcttccaggagcctggagaggtgtccttttctacctgaaacccaattggcagaagctc
cttgaaactggggtctgggtggatgcagcggctcagattttcttctcgttgggtcctggc
tttggtgtcttactagcctttgctagctacaacaaattcaacaacaactgctaccaagat
gccctggtgactagcattgtaaattgcatgacgagcttcatgtctggatttgtgatcttc
actgtgctcggttacatggcagagatgaggaatgaagacgtgtccgaggtggctaaagat
acagggcccagtctccttttcatcacctatgcagaggccattgccaacatgccagccgcc
accttcttcgccatcattttcttcttaatgataatcactctgggcttagacagcacgttc
gcaggacttgagggagtgatcaccgcggtgctggacgaattcccccatgtctgggccaaa
cgccgggagtggtttgtgcttgctgtggtcatcacctgtttctttggatctctgtccacc
ttgacttttggaggagcctatgtggtaaagttgctggaagaatacgccactggaccagcg
gttctcactgtagtgtttttagaagcgattgccgtgtcttggttctatggtattaaccag
ttctgcagcgacgtgaaagaaatgcttggttttagccccggttggttctggaggatctgc
tgggtagcaatcagcccaatatttctgctgttcatcatctgcagttttctgagcagcccc
ccagaactgcggctcttcaattacaattaccctcgctggactgttctcctgggctactgc
attgggacttcttccttcatctgcattcccacctatatcacttatcggttgatcgtcact
ccagggacattcaaagagcgtgttcttaaaagtatcactccagaaacacctacagagatt
cccttcggagaccttcgcttgaatactgtgtag
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