Sarcophilus harrisii (Tasmanian devil): 100923484
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Entry
100923484 CDS
T02286
Name
(RefSeq) desmocollin-3 isoform X1
KO
K07602
desmocollin 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100923484
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Major cadherins
100923484
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Big_9
Cadherin_CELSR2_9th
ZP1_ZP4_Ig-like
RibLong
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100923484
NCBI-ProteinID:
XP_031802349
Ensembl:
ENSSHAG00000010085
LinkDB
All DBs
Position
1:481787876..481841960
Genome browser
AA seq
934 aa
AA seq
DB search
MATEWPGRFGAVASCLKFLLILPVLNFSCEACKDVTFYVPIELEAKEIIGRVNLEECFKP
ANLIQSGDSDFGIVEDGSIYPTRTLSLSSGKRSFIIYLVNTQNWKQKEINVTLEHQKKKL
NKRQVKETILRRAKRRWAPIPCSIQENSLGPFPLFLQQIQSDSAQKYTVYYSISGPGVDQ
KPLNLFYIEKDTGNLFCTGPVDRETYEAFEIVAYASTPDGYYSDSPLPLTIKIEDENDNY
PMFTETVYNFEVLEGSRVGTTVGRVSATDRDEPDTMHTRLKYSIMEQQPPSPKLFAVHPV
SGVITTISHQLDREVVDKYKLTMKVQDMDGQFFGLMNTSTCIISVKDANDHAPTFIKSMY
EISIEENTIKKNILRVAVQDKDLPNTANWRANYTILKGNGNKNFEIVTDPKTNEGVLSVI
KPLDYEENKKVMLEIGATNEAPFSIDIRSISTAVVTVNVIDQNEGPDCRPAAQSVRIKED
VSVGTRVNGYKAQDTETRSGSDIRYKKLNDPKGWVTIDETSGSIITSKKLDREAEGIKNG
VYSITVLATDKDGKTCTGTLGIILEDVNDNAPVILQDNIVLCKPKMGQMTVVAVDPDDPM
NGPPFDFKLGLGSPDIQKIWTVTRLNDTSAYLSYQNNAQFGKYAIPITVSDRHGMSSTKM
MRVNLCDCVHPEQCESARSAYADTRLGTWAILAILLGIALLFCVLFTLVCGIWSPSKVKK
PFPDDMAQQNLIISNTEAPGDDRVCSTNGFATQMLNGNGQSICGTLGSGIKNGGHECFEM
VKGGHQTLESCRGGHQTLESCRGGHQTLESCRGGHQTLESCRGGHQTLESCRGGHHIVDS
CRNGGHVEVDTCRYTYSEWHNYTQPHLGEKLHLCNQNEDNTNAQDYVLSYNYEGRGSTAG
SVGCCSERHDEEGFEFLDQLEPKFATLAQTCMKR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaatggccaggacgcttcggggccgtagccagctgcctgaaattcctgctg
atcctcccggtcctgaatttttcttgtgaagcctgtaaggatgttactttctatgtgcct
attgaattagaagctaaggaaattattggcagagttaatctggaagaatgcttcaagcct
gcaaaccttattcagtcaggtgattctgactttggaattgtagaagatggttcaatatat
ccaacaaggacactttcgttgtcttcagggaagagatcttttatcatataccttgtaaat
actcagaattggaaacaaaaggaaataaacgtaacattggaacatcaaaagaagaaactg
aataaaagacaagtaaaagaaacaattctcagacgtgccaagagaagatgggctcctatt
ccatgttcgattcaagagaattccttgggtcctttccctttatttcttcaacagatccaa
tctgattcagcccagaaatatactgtttactactccatcagtgggcctggagttgatcaa
aaacctctcaatttgttttatatagagaaagatactgggaatttattttgtactggtcct
gtagatcgtgagacatatgaggcttttgagatagtagcctatgcttccactccagatgga
tattattcagactctcctttaccacttactatcaaaattgaagatgaaaatgacaactac
ccaatgttcacagaaacagtttataattttgaggttcttgaaggctctagagttggtaca
actgtggggagggtatctgccacagatagagatgaacctgatacaatgcatacacgcctg
aagtactccattatggaacaacaaccaccatctcctaaattatttgcagtgcatcctgtt
tcaggtgtgattaccacaatatcacatcagctggacagagaggtagtagacaaatacaaa
ttgacaatgaaagtacaagatatggatggtcaattttttggtttgatgaatacatcaact
tgtatcatttcagtaaaagatgcaaatgatcatgcccccactttcataaagtctatgtat
gaaatatcaattgaagaaaatacaatcaagaagaatattttgcgagtagctgtacaagat
aaggatttgcctaacactgctaattggagagctaattataccattttaaaaggcaatgga
aataaaaattttgagattgtgacagatcccaaaaccaatgaaggtgttttatctgttatt
aagccactggactatgaggaaaataagaaggtgatgctggaaattggtgcaaccaatgaa
gccccattttctatcgatatacggagcataagcacagctgtggtaacagtaaatgtaata
gatcagaatgaaggtccggattgcaggccagcagcacaaagtgttcgcattaaggaagat
gtatctgtggggacaagagttaatgggtataaagcacaagacacagaaaccagaagtggc
agtgatataaggtataagaaattaaatgatcccaaaggatgggtcaccattgatgagact
tcagggtcaataataacttccaaaaaactggacagagaggcagagggcattaaaaatggt
gtatatagcattacagtgctagcaacagacaaagatggtaaaacatgtactggcaccctt
ggaattatccttgaagatgtgaatgacaatgccccagtcatccttcaagataatatagta
ctttgcaaaccaaagatgggacaaatgacagttgttgctgtcgatcctgatgatccaatg
aatggacctccatttgatttcaaattaggacttggttctcctgatatccagaaaatatgg
acagtgaccagattgaatgatacatctgcatatctttcatatcagaataacgctcaattt
ggaaaatatgccatacctattactgtgagtgacagacatggaatgtcttcaacaaagatg
atgcgtgttaatctctgtgattgtgttcatccagaacaatgtgaatctgcaagatcagca
tatgcagacacaagactgggcacatgggccatccttgcaatattattgggcatagcatta
ctattttgcgttttattcacattagtctgtggaatttggagtccctcaaaagtaaaaaaa
ccatttcctgatgatatggctcagcagaatttaattatatcaaatacagaagctcctgga
gatgacagagtgtgttccacaaatggatttgcaacccagatgttgaacggaaatggccaa
agtatttgtggcacattaggatcaggaattaaaaatgggggacatgaatgctttgaaatg
gtgaaaggaggacatcagaccttggaatcctgtcgaggagggcatcaaactctggaatcc
tgtcgaggagggcatcaaactctggaatcttgtcgaggagggcatcaaactctggaatct
tgtcgaggagggcatcaaactctggaatcctgtcgaggaggacatcacattgtagattca
tgcaggaatggaggacatgttgaagttgatacttgcagatatacatactctgagtggcac
aattatactcaaccacatcttggtgaaaagttgcatctctgcaatcagaatgaagataac
accaatgctcaagattatgttctatcatataactatgaaggaagaggctccacggctggt
tctgtagggtgttgcagtgagcgccatgatgaagaagggtttgaatttttagatcaactg
gaacccaaatttgctacattagcacaaacatgcatgaagagataa
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