Sarcophilus harrisii (Tasmanian devil): 100923602
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Entry
100923602 CDS
T02286
Symbol
CIC
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100923602 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100923602 (CIC)
Transcription factors [BR:
shr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100923602 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100923602
NCBI-ProteinID:
XP_031817533
LinkDB
All DBs
Position
3:complement(594795508..594811986)
Genome browser
AA seq
1783 aa
AA seq
DB search
MPPNPGPATLPTRGLPHWGPTFKGYPLEPPPTPPPPHRRFPGAPPALSPPRHLPLAAPRR
PHLTRPLGAAGARLWRTLPVAGPAPLPSSPGEVVRGKTREWPARELGEHPPPGGQWAGPP
PPLPAPVPISVPPAGPAAVAQPGPAFGLASSPFQPVAFHPSPAALLPVLVPSSYPGHPAP
KKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHSVSSSQS
KEPAESAAVAHEQSPSGTGGPESGRPPGATCPESPAPGPPQAPGASEGSKVPPQHSEEEG
PGPTGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGRS
PNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHD
LAFQVKEAHFKAHPDWKWCNKDRKKSSSDAKPMALGLAGGPKEMRERSMSETGTAAAPGV
SSELLSAAAQTLLGTEVKTPASGPGTAERLQPVGPGPTRPRAFSHSGVHGLDGGEPDSQA
LQELTQMVSGPAPYTGSKPAPQYGGPGPFATPSEGGTLAGGRPPMLPARPSRSQRTASED
MTSDEERMVICEEEGDDDVIADDGFGSADIDLKCKERVTDSDSEDSSGEDPEGAKGFGRK
LFSPVIRSSSLSTAFTHCRPPLESEPPGAPDPSSAFSKGYGPTPSSSSSSSSSFQLAPGT
FKTQESGRGVAAGPLRAQHSVGGGPLPPKARFPPVDPNAYRRKRPESTGGPEPPGSQSFP
SPSVIASPSGGGVLQALVLPPGGNLYPAKDPPERDGSAAARLPSATVLVTAPASLGSGGL
TYGAPPAPPRPAPTVVTNVVRPVSSTPVPIASKPFPGAGRGEGSPAEGGAKGEAGAGPRA
PGGSPLGIGLVYTDKKQAAPTAPHLVAGPLLGVGKAPTAVTNLLVGTPGYGASAPPAVQF
IAQGPPGGGGTAAAAGPPTGSGPNGPVPLGILQPAPLGKPGGITQVQYILPTLPQQLQVA
PAPTVPGPKAAAVGGSGPTASIRFALPPGTATNGKVLAPATPAPGIPILQPVPSAAPPKA
QSVSPVQAQPSAGSTQLLPGKVLVPLAAPGMAVRGGGASQSLPLVSPPFSVPVQNGAQPS
SKIIQLTPVPVTTPGSLVPPLSPATLPSPASQSQKVILPSSTRITYVQSAAGHALPLGPG
SSSSQSAAPGAPASYGPASSVALGFTTIGPSGPAIVQPLISGQAPLLAPGQVGVSPVPSP
QLPPACTGGPVITAFYPGGPGGPSAMPLPQPTPPAPAPPGLVYTVATSAAPPAAILPKGG
APAPPAPTASQTPTSPFPSATGSVAYSLVTPKAQRPPPKPPQKVKAAIASIPVGSYESGV
PARPGPLPRQAAEQSAAREMPPEAEADGRPATPAPPPPLETWVPPGRESSRASPPPGPPA
EDRAGVKALEMAGKIPSSPDWRIPALALESRGEPPAPPSPAPAPGGSEGGGGRPPGTGDT
PERKEAPSKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLA
TSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFD
RTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADI
FPSKVCLQLKIREVRQKIMQAATPTEQPPGGEAPGPGPPPASAGTAPPPPAEGPDSPPPA
PDSSSSVPSAAPPQASEPAPSDAGWDGAGQPSPPPPGPSPGGR
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaaccctggccccgcaactctccccacccggggcctcccccattggggcccc
actttcaaagggtacccactggaaccccctcccacccccccccctccacaccgccgcttc
ccgggggccccccccgccctttcccccccccgccacctccccttggctgccccccgccgg
cctcacctcacccggcccctcggtgcggcgggtgcccggctgtggcgaactctcccggtt
gccggacccgcgccgctgccttcttccccgggggaggtggtcagggggaagacccgggag
tggccagcccgcgagctgggcgagcacccgccccccgggggccagtgggcgggcccacct
ccgcccctgcccgcccccgtccccatcagtgtcccccctgccgggccggccgccgtggct
cagccaggtccggcttttggattggcctcctcaccgttccagccagttgccttccacccc
tcgcctgccgccctgctgcccgtcctcgtgcccagcagctaccctgggcatcccgccccc
aagaaggaggtcattatgggccggcctgggacagtgtggacaaatgtggagccacgctcg
gtggccgtatttccctggcactcgcttgtcccattcctggcacccagccagcctgaccct
tctgttcagcccagtgaggcccagcagccagccagccactctgtctcctctagccagagc
aaagagcccgcagagtccgcggcagtggcccacgagcagtcccccagtgggacgggaggc
ccagaatctggacggccacctggggctacctgccctgagagcccagctcccggccctccc
caagcccccggggcctccgaaggcagcaaggttccacctcagcattctgaggaggaaggc
cccgggcctaccggggagagccggctggacagcgagaccgagagtgaccacgatgacgcg
ttcctctctatcatgtctcctgagatccagttgccactcccaccaggaaaacgccggaca
cagtccctcagcgccttgcccaaggagagggactcttcctccgagaaggatgggcgcagc
cccaacaagagggagaaggatcacatccgacggcccatgaacgccttcatgatattcagc
aagcgacaccgggccctggtgcatcagcgccacccgaaccaggataaccggaccgtcagc
aagatcctgggcgagtggtggtacgctctaggacccaaggagaaacagaagtaccacgat
ctggcctttcaggtgaaggaggcccacttcaaggcccacccggactggaaatggtgcaac
aaggaccggaagaaatcaagctcagatgccaagcccatggccctcggcctggcgggaggt
cccaaggagatgcgagagcgcagcatgtccgagactggcacggcagccgcccctggagtc
tcgtcagagttactgtcggcagcagcccaaaccttgctgggcacggaggtcaagaccccg
gcctctggccctgggactgcagaacggctgcaacccgtggggcccggccccaccaggcct
cgagcgttctcccacagtggcgtgcatggcttagacgggggtgagccggacagccaggcg
ctgcaggaactcacccagatggtgtcgggtccagctccctacacaggatcgaagcctgca
cctcagtatggaggcccagggccctttgccactcccagcgagggcggaaccttggcgggt
gggcggcccccgatgctgccggcgcggccgtcccgctcccagcgcacggccagcgaagac
atgaccagcgatgaggagcggatggtcatctgtgaggaggaaggcgacgatgacgtcatc
gcggacgacggcttcggcagcgccgacatcgacctgaagtgcaaagagcgggtgacggac
agcgacagtgaggacagctctggggaggaccccgagggcgccaagggctttggcaggaag
ttgttctcacctgtgatccggtcatcctctttgtctactgccttcactcactgccgccca
cccctggagtctgaaccccccggagcccctgacccatcttcagctttttccaagggctac
gggcccacgccatcctcctcctcctcctcctcttcctccttccagttggcccccgggacc
ttcaagacccaagagtctggtcgaggtgttgccgcagggcctcttcgtgcccagcactct
gtcgggggaggccccctgcctcctaaagcccgttttcctcctgtggacccaaatgcttat
cggcgcaagcggccagagagcacgggagggccggagccccctggatcccagtctttcccc
agcccctcggtcatcgcctcgccttctggagggggtgtcctgcaggccttagtgctgccc
cccgggggcaacctgtacccagccaaggatcccccagagcgggatgggagcgcagctgcc
cgactaccgtcggccacggtgctggtgacggcccccgcttcgctggggagtggaggactc
acctatggagcccccccagcccccccacgccccgctccaaccgtggtgaccaatgtggtc
cggccggtcagcagcaccccggtgcccattgcttccaaacccttccctggggcggggcga
ggtgaggggtcaccggccgaaggaggtgccaaaggggaggcgggggctggtccccgagca
ccggggggctctccgctcggtatcggtctggtctacaccgataaaaagcaagcagcccct
acggccccgcatctggtggcagggccccttctgggggtgggcaaggcccccactgccgtg
accaaccttctcgtgggcaccccgggctatggtgcctccgcccctccggctgtgcagttc
attgcccaaggaccgcctggtggaggggggacagcagctgcagcggggccccccactggc
agtggcccaaatggccctgtgcccctgggcatcttgcagcccgcccctctaggcaaacct
gggggcatcacccaggtgcagtacattctgcccaccctgccccagcagctgcaagtggcc
ccagccccgacggtgcctgggcccaaagctgcagctgtcgggggatcaggccccacggcc
agcatccgctttgccctgccaccaggaactgccaccaacgggaaggtcctggcaccagcc
accccagcccctgggattcccatcctgcagccagtgccctctgccgcaccccccaaagcc
cagtcagtgtctccagtgcaggcccagccctcggcaggctccacccagctgctgcctggg
aaggtcctggtgcccctggcggcgcctggcatggcggtgcgaggtgggggggccagccag
tctctgcccttggtgagcccacccttctctgtgccagtgcagaacggagcccagccatct
agcaagatcatccagctcaccccggtgccagtgaccactcctggcagcctggtgccccca
ctcagcccggccaccctgcccagtcctgcctcccagtcccagaaggtcattctgccctct
tccaccaggataacctacgtgcagtctgccgctgggcacgccctgcccctgggccccggc
tcctcctccagccagagcgcggctcccggcgcgccggcctcctacgggccggccagctcc
gtggccctgggcttcaccaccattgggcccagcggtcctgccatagtccagcccctgatc
tcaggccaagccccgcttctggccccaggccaggttggcgtgtcaccagtccccagcccc
cagctgccgccagcctgcaccgggggtcccgtcatcacagccttctaccctggcgggcca
gggggcccctcagccatgcccctccctcagccaaccccaccagcccccgcccccccgggt
ctcgtctataccgtggccaccagtgctgcccctcctgctgccatcctgcccaagggcggg
gcacccgctcctccggcccccactgcctctcagacccctactagtcctttccccagtgcc
acaggctccgtggcttacagcttggtgaccccgaaagcccagcgccccccacccaagccc
ccgcagaaagtgaaggcggccatcgccagcatccccgtggggtcctacgagtcgggggtc
cctgcccggccgggtcccctcccccggcaggctgcagagcagagcgccgccagggagatg
cccccagaggcggaggccgacggtcggccagccacgcccgcgcccccacctcccctggaa
acttgggttccgcccggccgggagagctcccgggccagccctcccccaggcccgcccgcc
gaggatcgggcaggagtcaaggcactggaaatggccggcaagattcccagctcccctgat
tggcggattccagccctggcactggagagccgcggggagcccccggctccgcccagccca
gcccctgcgcctgggggcagtgaagggggtggcgggcggcctcccgggaccggagacacc
ccagagcggaaggaagcccccagcaagaaggtgaaggttcggcctcctccgctgaagaag
acctttgactcggtagacaacagggtcctctcggaggtggacttcgaggagcgcttcgcg
gagctgcccgagttccggccggaggaggtgctgccctcgcccacgctgcagtcgctggcc
acctcaccccgcgccatcctgggctcctacaggaagaagaggaagaactcgacggacctg
gactcggccccagaggaccccacctcccccaagcgcaaaatgaggcgtcgttcgagctgc
agctctgagcccaacacgccgaagagcgccaagtgcgagggtgacatcttcacctttgac
cgcaccggcacggaggcggaggacgtgctgggggagctggagtacgagaaggtgccctac
tcgtcgctgcgccgcaccttggaccagcggcgcgccctggtcatgcagctcttccaggac
cacggcttcttcccctcggcccaggccacggccgcgttccaggcgcgctacgcggacatc
ttcccctccaaagtgtgtctccagctgaagatcagagaggtccggcagaagatcatgcag
gcagcaacccccacagaacagccccccggtggggaggcccctggccctgggcctcccccc
gccagtgcagggaccgctcccccgccccccgccgagggccctgactcgccaccccctgct
ccggactcctcatcctccgtcccttcggctgcgcctccccaagcctcggagccagcaccc
agtgacgccggctgggacggggccggccagccttcccctcccccacccggaccctccccg
gggggcaggtga
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