Sarcophilus harrisii (Tasmanian devil): 100923697 Help Entry 100923697         CDS       T02286                                  Symbol SKIV2L Name (RefSeq) helicase SKI2W isoform X1   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism shr  Sarcophilus harrisii (Tasmanian devil) Pathway shr03018   RNA degradation Brite KEGG Orthology (KO) [BR:shr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     100923697 (SKIV2L)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:shr03019]     100923697 (SKIV2L) Enzymes [BR:shr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      100923697 (SKIV2L) Messenger RNA biogenesis [BR:shr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      100923697 (SKIV2L)   mRNA degradation factors    3'-5' decay     Ski complex      100923697 (SKIV2L) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII DUF3516 Motif Other DBs NCBI-GeneID:  100923697 NCBI-ProteinID:  XP_003768961 Ensembl:  ENSSHAG00000008963 UniProt:  G3W4M7 LinkDB All DBs Position 4:complement(284988079..284998880) Genome browser AA seq 1249 aa AA seqDB search MLETERLVLPPRGPLDLPLCALELGCTGRWELLSQPQVSDSPAGTLSHGLPPCAPELQGE TEQLFLSSPEWLPLHGVERVAWKWQRKTDPWSLLGLPGAPVPSDLQAQRHPTTGRVLGYR EVLLEDTNLSATTSLSLRRPPGPSSQALWGNPTHYPFWPGGMDEPTIADLSICGDSEEEI DFEKDLLTIPPGFKKGVGFTPKNNSTPASGLLSLSHLLEPLELGGGEEEEEETSGRLGGP GGDSVTASTSEPPLVHASSLEDLVLKDASAPLSPPEPPKPPVLEQWAIPVDITSPVGDFY RIIPQPAFQWPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTI YTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDL EWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRHLYV ISTAARPVPLEHFLFTGNSPKTQGELFLLLDSRGVFHTKGYYAAVEAKKERTSKHAQTFG AKQPMHQGGPGQDRGIYLSLLASLRSRAQLPVVVFTFSRGRCDEQASGLSSLDLTTSSEK SEIHLFLQRCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVK VLFATETFAMGVNMPARTVVFDSMRKHDGATFRDLLPGEYVQMAGRAGRRGLDPTGTVIL LCKGRVPEMADLHRMMLGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRK DSKAHEQTLAELTKRLGDLEEPDTSGQLADLPEYYSWGEELTETRGLIQRRIMESVNGLK SLSVGRVVVVKNQEHRNALGVILQVSSDTTNRVFTTLILCEKQPPEGPLPGSSRSLDVPY PDDLVGHKLFLPEGPCDHTVAKLQPSDIIAITTKMLRVNGERILEDFSKRQQPRFKKDPP SPLVTSAVQEMLRLAQAHPAGPPTLDPVNDLQLKEVLVVEGGLRARKLEELIRGAQCVHS PRFPAQYLRLQERVQIQKEMERLRFLLSDQSLLLLPEYHQRVEILRTLGYVDGAGTVKLA GRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGIER VKDVARRIGEVQVSCGLNQTVEEFVGELHFGLVEVVYEWARGMPFSELAGLSGTPEGLIV RCIQRLAEMCRSLRGAARLVGEPVLGAKMEAAATMLRRDIVFAASLYTQ NT seq 3750 nt NT seq  +upstreamnt  +downstreamnt atgctggagacggagcgtctggtactgccccctcgggggcccctggatttgcctttgtgt gcgctggagctcggatgcactgggcgctgggagcttttgagccagcctcaggtctcggat tcgccggcgggcaccctctctcatgggctaccaccctgtgccccagaactgcaaggagag actgagcaattgtttctgtcatcccctgaatggctgcccctgcatggtgtggaacgtgtg gcctggaaatggcagagaaagacagatccctggtctctcctggggctgccaggagcacct gtcccatcagatctgcaggctcaaagacacccaaccaccggcagagtcctgggctacaga gaggtcctgctggaggacacaaacctttcggccacaacttccctgtctctacgccggccc ccaggaccctcatcccaggctttatggggcaacccaacacactatccattttggccaggt gggatggatgaacctaccatagcagatctgagcatttgtggggactctgaggaagagatt gactttgagaaagatctccttaccattcccccaggcttcaagaaaggtgtaggcttcact ccaaagaataactcaacccctgcttctggccttctcagtcttagccatcttctcgaaccc ctggaacttggtggaggggaggaagaggaagaagagacttcaggaagattggggggtcct ggaggggacagtgttacagcctccacttctgagcccccactggttcatgctagtagcctg gaggatttagtcctaaaggatgcatcagcccccttgtcacctccagaacctccaaagccc ccagtcttggaacagtgggctattcctgtggatattacttcacctgtgggagatttctac cggattatcccccaacctgccttccagtggccgtttgaaccagatgtatttcagaaacag gctattctgcacctggagagacatgactctgtatttgttgctgctcacacatctgcagga aagactgttgtggctgaatatgccattgcccttgcccagaaacatatgacccgtaccatc tatacatcacctatcaaggccctgagtaatcagaaatttagagatttccgaaacaccttt ggtgatgtgggactcctcacaggggatgtccagctacatcctgaagcttcctgcctcatt atgaccacagagatccttcgctccatgctgtatagtggttcagatgtgattcgagacctt gaatgggtgatatttgatgaggtccattacatcaatgatgctgagagaggagtagtgtgg gaagaagtcctcatcatgcttcctgatcatgtttccatcattctcctcagtgctactgtg cccaatgcccttgaatttgcagattggattgggaggctgaagcgtcggcatctctatgtg atcagcacagctgcccgaccagttcccttggaacattttctattcactgggaatagtcca aaaacccaaggagagctttttctgcttctggattcacgaggagtttttcacactaaggga tactatgcagctgtggaggccaagaaagaaaggactagcaaacatgcacagacctttggg gcaaagcagccaatgcaccaaggtgggcctggacaggaccgaggcatatacctgtccctc ttggcctccctgcggagccgtgcccagctccctgtggtggtgttcaccttctcccggggc cgctgtgatgagcaggcgtcaggtctcagctcccttgaccttaccaccagctctgagaag agtgagatccaccttttcctgcagcgatgccttgcacgacttcgaggctccgaccgccag ctacctcaggtactgcatatgtcagaactccttcgccggggtctaggtgtacaccacagc ggtatattgcccattctcaaggagattgtggaaatgctcttcagtcgtggtttggtcaag gtcctatttgctacagaaacctttgccatgggtgtgaacatgccagcacggactgtggtg tttgattctatgcgcaagcatgatggtgcaactttccgtgacttgctccctggggaatat gtacagatggcagggcgggcagggcgtcgtggtctggaccctacaggcactgtcatccta ctctgtaagggacgtgtgcctgagatggctgatctgcataggatgatgttgggaaagcct tcccagctacagtcccaatttcgcctcacatatacaatgattcttaacttgcttcgggtt gatgccctcagagtggaagatatgatgaagagaagcttttctgagttcccttcaagaaag gacagcaaggcacatgagcagactttggcagaattgacaaagagacttggggacctagag gaaccagatacctcagggcagcttgctgatcttcctgagtattacagctggggggaagag ctgacagagactcggggcctaatccagcgacggatcatggaatcagtgaatgggttgaaa tctctgtcagtgggaagagtggtagtggttaagaatcaggagcatcggaatgcacttgga gtgatcttgcaggtctcctcagataccacaaaccgagttttcacaaccttgattctctgt gagaagcagccccctgaggggccactgcctggcagttccagatcccttgatgttccctat cctgatgatttagtgggtcacaagctattcctccctgaagggccttgtgatcatactgtg gcaaaacttcagccaagtgacatcattgctatcacaacaaagatgctacgggtgaatggg gaacgaattttggaagattttagcaagaggcagcagccaagattcaagaaggaccctccc tctccattggtgacctctgctgttcaggagatgctccgattggctcaggcacatccagcg ggaccccccactctggatccagtcaatgatttacaactgaaggaggtgttagtagttgag ggtgggctccgtgctcggaagctagaagaattgattcgaggtgcccagtgtgtacatagt cccaggtttccagcccagtacctgagactgcaggaacgtgtgcagatccagaaggagatg gaaagattacggtttctactttcagaccagtcattgctcctgctgccagagtatcatcag cgagtggagatcctgaggacattgggctatgtggatggggcagggaccgtgaagctggca ggaagggtggcatgtgccatgagtagtcatgaactgcttctgacagagctcatgtttgac aatgcgctgagtgcccttcggccagaagagattgctgctctgctatctggccttgtctgc caaagtcctggagatcctggagaccaattgccaagcactcttaaacagggcatagagcgt gtcaaggatgtggcccggcggattggtgaagttcaagtatcctgtggcctaaaccagact gtggaagagtttgtgggagaactacactttgggctggtagaagttgtctatgagtgggca cgaggcatgcctttctctgagctggcagggctatcagggaccccagaaggtttgattgtc agatgtatccagcgcctggcagagatgtgtcgttcattgcgaggggctgcccggctggtg ggagaacctgtgctaggtgctaagatggaggcagctgccacaatgctccgtcgtgacata gtttttgctgctagtctctatacccagtga

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