Sarcophilus harrisii (Tasmanian devil): 100923729
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Entry
100923729 CDS
T02286
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100923729 (PRPF39)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100923729 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_MalT
TPR_16
Motif
Other DBs
NCBI-GeneID:
100923729
NCBI-ProteinID:
XP_003756349
Ensembl:
ENSSHAG00000004414
LinkDB
All DBs
Position
2:complement(311762004..311799392)
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AA seq
668 aa
AA seq
DB search
MQNSAHMDEYSSSSNGNASNGSEVAIEQPSDFSTEIMNVIEMEQSPDGSPNVNEENTEEN
EISNVELPVTDTEAQFPPEYEKFWKTVENNLQDFTGWVYLLQYVEQENHLLAARRAFDKF
FTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPDD
PETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTTIYDRILGIPTQLYS
HHFQRFKEHIQNNLPRDLLTSEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARSILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDA
VKNAKSNNESSFYAIKLARHLFKIQKNLSKSRKVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEDNILTCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQILLKEQ
DSLKRKAENGAEEPDEKKVHTEDAALASTQIIDGDIQANQAAYNYSAWYQYNYQNPWNYG
QYYPPPPT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctgctcacatggatgaatacagcagttctagcaatggcaatgcaagcaat
ggttctgaggtagccatagagcagcccagtgatttcagtactgagattatgaatgttata
gagatggaacagtcacctgatggctctcccaatgtgaatgaagaaaacacagaggaaaat
gaaatttcaaatgtagaactaccagtgacagacactgaagcacaatttcctccagaatat
gaaaagttttggaaaactgtagaaaataatctccaagattttactggctgggtatatttg
ctgcaatatgtagaacaggagaatcacttgctggctgccaggagagcatttgacaaattt
tttacgcactacccatattgctatggttattggaaaaagtatgcagatcttgaaaagcgc
catgacaacattaaacaatcagatgaggtttatcggcgagggcttcaggcaatacctctt
agtgttgatctttggattcattatataaacttcttaaaagaaacattggacccagatgat
cctgagacaaataatacaataagaggaactttcgagcatgctgttttagctgcaggaaca
gatttccgatctgacagattatgggaaatgtacataaactgggaaaatgaacagggaaat
ctgagagaagtgacaactatatatgatcgtattcttggtattccaacacagctctatagt
caccatttccagaggtttaaagaacatatacagaataacttgcctagagatcttttaact
agtgagcaatttattcagctacgaagagaactggcttctgtaaatggacacagtggtgat
gatggccctcctggtgatgatttgccatctggaattgaagatataactgacccagcaaag
ctgatcactgaaatagaaaacatgagacatagaatcattgagattcatcaagaaatgttt
aattataatgagcatgaggttagcaaaaggtggacctttgaagaaggtattaaaagacct
tatttccatgtgaaaccattggaaaaagcacaactgaaaaattggaaggaatacttagaa
tttgaaattgaaaatggaactcatgaacgtgttgtggttctctttgaaagatgtgtcata
tcatgtgccctctatgaggacttttggattaagtatgccaagtacatggaaaaccatagt
atcgaaggagtgagacatgtctacagcagggcttgcactatccatcttccaaagaaaccc
atggtccacatgctatgggctgcttttgaagaacagcagggtaatattaatgaagcaaga
agcattctaagaacatttgaagaatgtgttctaggactggcaatggttcgcttgagaaga
gtaagtttagagagacggcatggaaatatggaagaagctgagcacttgcttcaggatgct
gttaagaatgccaaatcaaataatgaatcctcattttatgctataaaattagcccgacat
cttttcaagatacagaagaacctttcaaaatccagaaaagtactcttggaagccattgag
agagacaaagagaacacaaaattgtaccttaatttacttgaaatggaatatagtggagac
ctcaaacaaaatgaagacaatatcctcacctgttttgacaaagctatacatggttcattg
cctattaagatgagaattacattttctcaacgaaaagtggaatttctagaagattttggt
tctgatgtgaacaagcttctggatgcttatgatgaacatcagatacttttgaaagaacaa
gattctttaaaaaggaaagctgaaaatggcgcagaagagccagatgaaaaaaaagtacac
acagaagatgcagctttagcatctactcagataattgatggagatatccaagctaaccaa
gctgcatataattatagtgcctggtatcaatacaattaccagaatccctggaattatgga
cagtattatcctccccctccgacctga
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