Sarcophilus harrisii (Tasmanian devil): 100923733
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Entry
100923733 CDS
T02286
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100923733 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shr00536
]
100923733 (COL23A1)
Glycosaminoglycan binding proteins [BR:
shr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100923733 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100923733
NCBI-ProteinID:
XP_031809646
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Position
2:complement(417911142..418378618)
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AA seq
523 aa
AA seq
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MGAWEPGSRRASPAGAPACPAWGGGAAALVLSALCLLLSLGSVAACLLLSAQASELQGRV
SALEEEQQRQQHVGWGPPEASGALISWAEPYLERLLKEKLEGLAKQRKAREVLTECLCPP
GPPGRRGKPGRRGDTGPAGPLGLDGKPGLPGPKGEKGEPGDFGPRGDRGQDGAAGPPGPP
GPPGARGPPGDTGKDGPRGPQGLDGLKGEPGPGGVMGPKGPPGLKGEPGMPGRKGDDGLP
GQPGLQGSVGPKGEEGSPGPQGKNGTDGSPGTKGEPGERGSDGFLGPRGPPGLKGEQGDT
VVIDYDGRILDALKGPPGPQGPPGPPGNPGAKGELGLPGPPGVDGEKGPKGSKGDQGQPG
LMGPKGEIGEMGLSGPPGVDGPKGEKGESGSASLQESLAQILAEPGPPGLPGPPGPMGLQ
GIQGPKGLDGAKGEKGATGEKGSNGLLGPAGPPGLIGLPGTKGEKGRPGEPGLDVSFLLL
PHPNWELSITSPGTFQNMPLSHGPFWERGEGEGTRSFHLGIYK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgtgggagccggggtcccggagagctagccccgcgggggctcccgcgtgtccc
gcgtggggcggcggcgcggcggcgctggtgctgagcgcgctctgcctgctgctgtccctg
ggctcggtggccgcctgcctgctactgagcgcccaggcgtccgagctgcagggcagggtg
tccgcgctcgaagaggagcagcagcggcagcagcatgtaggttgggggccccccgaggca
tccggcgccctcatctcctgggccgagccctacctggagaggctcctgaaggagaagttg
gaaggactagccaagcaacggaaagctcgagaagttttaactgagtgtctctgtccccca
ggacccccagggaggcgtggaaaacctggaagaagaggagataccgggcctgcagggcca
ctgggtttggatggcaagccgggattgccgggtcccaaaggtgaaaagggagaaccaggt
gacttcggcccacggggagatcgaggtcaagatggagctgctggtccccctgggccccca
ggtcccccgggagccagagggccccctggagacacaggaaaggatggtcctcgaggtccc
caagggctggatggtctaaaaggagagccaggaccaggaggtgtgatgggcccaaaagga
ccaccagggctcaagggcgaacctggtatgccaggaagaaagggagatgatggcttacca
ggacaaccgggactccagggatctgttgggccaaagggagaagaaggaagcccagggcct
cagggaaagaatggaactgatggatcaccaggaaccaagggggagcctggtgagagagga
tctgacggcttccttggacccaggggtccacctggcctgaaaggtgagcaaggagacaca
gtggtgattgactatgatggcagaattctggatgctctcaagggtcctccaggacctcaa
ggcccacctggtcctccaggaaaccctggagcaaagggagagctcggattgcccggtcct
cctggcgttgatggagaaaaggggccaaagggctctaaaggagaccagggacagccggga
ctgatgggaccgaaaggagaaattggagaaatgggcttgtctggccccccgggtgttgat
ggccccaaaggtgagaagggagaatcaggatctgcaagtcttcaggagagcctggcccag
attctggcagaaccggggccacctggcttacctggccctccaggtccgatgggtcttcag
gggatccaaggtcccaagggattggatggtgcaaagggggagaagggtgctaccggagag
aaaggctccaatgggctgctcggaccagctggcccacctggcctaatcggattacctgga
acaaaaggagaaaagggcagacctggtgagccaggattggatgtaagtttcctactgctt
cctcacccaaactgggagttatcaataacatcccctggaacgttccaaaacatgcccctg
tcacatggtcccttttgggagaggggagaaggggagggtaccagaagttttcaccttggt
atatataagtaa
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