Sarcophilus harrisii (Tasmanian devil): 100923893
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Entry
100923893 CDS
T02286
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X3
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04010
MAPK signaling pathway
shr04015
Rap1 signaling pathway
shr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100923893 (RAPGEF2)
04015 Rap1 signaling pathway
100923893 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100923893 (RAPGEF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
100923893
NCBI-ProteinID:
XP_012407594
Ensembl:
ENSSHAG00000008902
LinkDB
All DBs
Position
6:85726363..86014231
Genome browser
AA seq
1694 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKS
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMDKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTSERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLMTLTKPSREAPLPFILLGGSEKGFGIFVDSVDSGSKATEAGLKRGDQILEVNGQ
NFENIQLAKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVMGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPTALPVSGTLSSSNPDLLQSHHRILDFNTTPDLPDQVLRVFKADQQS
RYIMISKDTTAKEVVIQAIREFAVTATPDQYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTSCVNLKKFEEVINQETFWVASEILRETNQLKRMKTIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNS
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMASVNMDPAL
MFRTRSLSQGSTNAAVLDVAQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLDLE
MDEESLQTLSLQCEPATNTLPKNPGDKKSGKPDTSPVASRAGTQQKVQTQPPPQQQPPPP
HKINPGLQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLERHKKQADDTI
SNASSQLSSPPTSPQSSPRKGGSGNQLRSCGSRQSDLTSSSSSLGSENSNKNNNAPRTYG
IGYTLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDSMPVSLHDERRQRHSVSIVETNLGM
GRMERRTLLDPDQYSLGSYAPVSETRGLYAGATVISSPSTEELSQDQGDRASLDAADSGR
GSWTSCSSGSHDNIQTIPHQRSWETLPFGHAHFDNAGDGATLWASSSHMDPVMFPDHSTK
YNRQNQSRESLDQAQSRASWASSTGYWGEDSEGDTGTIKRRGGKDVSIEAETSSLTSVTT
EETKPVPMPAHISVTSSTTAKGLIARKEGRYREPPPTPPGYVGIPITDFPEGHSHPASRK
PPDYNVALQRSRMVARPCDTPGPSTLQQPHSHPTNRPVNKPQWHKPNESDPRLASYQPQG
FSTEEDEDEQVSAV
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtaatgaagaacccagccgagaga
agcccccaggatctggaaatagtgtattcctatttacatggaatggaagctttgtctaac
ttaagagaacatcaacttagattaatgtgtgaaaccgtgagatatgaaagacatgaagca
aatgaagttttgtactatcctgatgatattggtacctgttggtatatccttctctctggt
tcggtgttcattaaggaatccatgtttctcccaaggagcagttttggcaagcgttctgca
ggaagctttaggcgtggctgtgaatgcattgttttagagccatctgaaatgattgtggta
gactatatggatgaaaatgaagagtattttcagcgccaagcttctcatagacagtccaga
agaagatttcgaaaaattaaccagaaaggtgaaagacaaacaatcattgacactgtggat
ccttatcctgttgggaagccacctttacctagaggttatcatacggaatgcactaaatct
cagcttccggcagacttcacaaaactacaccttactgacagtctccacccacaggtgacc
cacgtttcctctagtcattcaggatgtagcatcaccagtgattctggaagcagcagcctc
tctgatatctaccaggccacagaaagtgaggctggtgatatggacctgagtgggctgcca
gaaaccgcagtggattcagaagatgatgatgatgaagaggacattgaaagggcctcggat
cctttgatgagtagggatattgttagagattgtttggaaaaagatcccattgataggacg
gatgatgacattgaacaacttctggaatttatgcatcagttgcctgcttttgctaacatg
acaatgtctgttagaagagaactctgtgctgtgatggtatttgcagtggtggaaagagca
ggaactatagtgttaaatgatggagaagagctggactcctggagtgtaatcttaaatggt
tcggtggaagtgacatatccagatgggagaacagagattttatgtatggggaacagtttt
ggtgtgtcccccactatggataaggaatatatgaaaggagtaatgaggacaaaagtggat
gactgccagtttgtctgcatagcccagcaggattactgccgcattctcaaccaggtggaa
aagaacatgcaaaaggtggaagaggaaggagagatagttatggtgaaagaacaccgagaa
cttgaccgtactggaacgagaaaaggtcacattgtcatcaagggcacttcagaaagatta
acaatgcatttggttgaagaacattcagtggtggatccaacatttatagaggatttcctg
ctgacctataggacttttctgtctagtccaatggaagtggggaaaaagttattggagtgg
ttcaatgaccctagcctcagggataaggttacacgggtagtgttgttgtgggtgaataat
cacttcaatgactttgaaggggatcctgccatgactcgatttctagaagagtttgaaaac
aatttggagagagagaaaatgggtggacacctgaggctattaaatattgcatgtgcagct
aaagctaagcggagattgatgacactcacgaagccttcacgggaagctcctttacctttc
attttgcttggaggttctgagaaaggatttggtatctttgtggatagtgtggattcaggg
agcaaagcaacagaagcaggcttgaagcgtggggaccagattttagaggtaaatggtcag
aattttgaaaacattcagctcgcaaaagccatggaaattctgagaaacaacacacattta
tctatcactgtgaaaaccaacttatttgtgtttaaagaacttttaacaagattatcagaa
gagaaaagaaatggtgccccacatctccctaagattggagacattaaaaaggctagtcgc
tactcaatcccagatcttgcggtagatgtggaacaggttatgggacttgaaaaagtaaat
aagaaaagcaaagccaataccgttggaggaaggaacaagctaaaaaagatacttgacaag
actcgcatcagtatcttgccacagaaaccatacaatgatattggaattggccagtctcaa
gatgacagcattgtaggattaaggcagacaaaacacatcccaacggcattacctgtcagt
ggaactttatcatctagtaatcctgatttattgcagtcacatcaccgcattttagatttc
aatactactccagatttaccagaccaagttttgagggtttttaaggcagaccagcagagc
cggtacatcatgatcagcaaggacacgacagcgaaagaagtggtcattcaggccatcagg
gaatttgctgtgactgccacacctgatcaatactccttgtgtgaggtctctgttactcct
gagggagtaattaaacaaagaagacttcctgatcagctttccaaactggccgatcgaata
caactaagtggaaggtattatctgaaaaacaacatggagacagaaacactctgttcagat
gaagatgctcaggagttgttacgagaaagtcagatttccctcttgcagctcagcactgtt
gaagtcgctactcaactctctatgagaaattttgaactttttcggaacattgaacccaca
gaatacattgatgatttgtttaagctcaaatcaaaaacaagctgtgtaaacctgaaaaaa
tttgaagaagttattaaccaggaaacattttgggtagcatctgagattttacgagagacc
aaccagctaaagaggatgaagaccattaaacatttcatcaagatagcattacactgtagg
gaatgcaagaattttaactcaatgtttgcaatcatcagtgggttgaacctggcaccagta
gcaagacttcggactacttgggaaaaacttcccagcaaatatgaaaagttatttcaggat
ctccaggacctgtttgatccttctagaaacatggcaaaatatcgcaatgttctaaacagc
caaaacctgcagccccccatcatccctctattccctgtaattaagaaagatcttacattt
cttcatgaaggaaatgactcaaaagtggatggcttggttaattttgaaaagctaagaatg
attgcaaaagaaattcgtcatgttggtcgaatggcttcagttaacatggatccagctcta
atgtttagaactagatctctcagtcaagggagtacaaatgcagcagtactggatgttgca
cagactggtggacacaaaaaacgtgtacgccggagttccttcctcaatgccaaaaaatta
tatgaagatgcccaaatggctcgcaaagtgaaacagtacctgtccaacttggatttagaa
atggatgaagagagtcttcagacattatcattgcagtgtgagcctgcaactaatactttg
cctaagaatcctggagacaaaaagtctggcaaaccggacacatcaccagtcgcatcaagg
gcaggaacacagcagaaagtacaaacacagccaccaccgcagcagcagccaccaccgcca
cataaaataaacccaggattacaggttcctgctgtttctctctatccatcacgaaaaaaa
gtccctgtaaaggatcttcccccatttggtatcaactctccacaagctttaaagaaaatt
ctttctttatcagaagaaggaagtttggaacgtcacaagaaacaagcagatgatacaata
tcaaatgcatcttcacaactctcttctcctccaacttctccacaaagctctccgaggaaa
ggtggcagtggcaatcagctgagatcttgtggctccagacagtcggacctaaccagttcc
tcctcttctcttggaagtgagaacagtaacaagaataacaatgcaccacggacctatggg
ataggttatactttggctcctagtggcactgtggataacttttcagattctggtcacagt
gaaatctcttcccgatctagtattgtcagcaattcttcctttgattcaatgccagtctca
ctgcatgatgagaggagacagcggcattctgtcagcattgtggaaactaatctaggtatg
ggcagaatggagagaagaactctgctcgatccagatcaatatagcttagggtcctatgca
ccagtgtcagagactcggggtttatatgctggggctacagtgatttcttccccaagtact
gaagaactttcacaggaccagggggacagagcttcactggatgcagcagatagtggccgt
ggaagctggacttcttgctcaagtggttcccatgataatatacaaactataccacaccag
agaagctgggagacacttccttttgggcatgcacattttgataatgcaggggatggtgca
accttgtgggcttcaagcagtcatatggacccagtcatgtttcctgatcatagcacaaag
tacaacagacagaatcaaagtcgagagagccttgaccaagcccagtcaagggcaagctgg
gcatcctcaactggatactggggagaagattcagagggtgatacgggcaccatcaaacga
aggggtgggaaggatgtttccattgaagcagaaacaagtagcttaacatctgtcacaaca
gaagaaacaaaacctgttccaatgcctgctcacatatccgtgacatcgagtactactgca
aagggtcttattgcacggaaggaaggcaggtatcgagaaccaccaccaacccctccaggc
tatgtaggaatccccatcactgattttccagaaggacattcacatccagccagcaggaaa
cctccagactacaatgtcgccctccagaggtctcgaatggtggcccggccctgtgataca
cctgggccctccacgttacagcaaccgcacagtcatccgacaaaccggcctgtgaacaaa
cctcagtggcataaaccaaatgagtcagacccacgcctggcttcctatcagcctcaaggg
ttttccacagaggaggatgaagatgagcaagtctctgctgtctga
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integrated database retrieval system
