Sarcophilus harrisii (Tasmanian devil): 100923937
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Entry
100923937 CDS
T02286
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03272
Virion - Hepatitis viruses
shr04145
Phagosome
shr04913
Ovarian steroidogenesis
shr04925
Aldosterone synthesis and secretion
shr04927
Cortisol synthesis and secretion
shr04934
Cushing syndrome
shr04975
Fat digestion and absorption
shr04976
Bile secretion
shr04977
Vitamin digestion and absorption
shr04979
Cholesterol metabolism
shr05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100923937 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100923937 (SCARB1)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
100923937 (SCARB1)
04925 Aldosterone synthesis and secretion
100923937 (SCARB1)
04927 Cortisol synthesis and secretion
100923937 (SCARB1)
09154 Digestive system
04976 Bile secretion
100923937 (SCARB1)
04975 Fat digestion and absorption
100923937 (SCARB1)
04979 Cholesterol metabolism
100923937 (SCARB1)
04977 Vitamin digestion and absorption
100923937 (SCARB1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100923937 (SCARB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100923937 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100923937 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100923937 (SCARB1)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100923937 (SCARB1)
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100923937 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Glyco_hydro_1
SHR3_chaperone
Motif
Other DBs
NCBI-GeneID:
100923937
NCBI-ProteinID:
XP_031804286
UniProt:
G3VH07
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Position
1:683465059..683563131
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AA seq
509 aa
AA seq
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MACKLGGCKTIVAVGLTGVLCTVLGGVMIFMVPQLIRDQILQNVKIDPSTLSFEMWKEIP
IPFYMSVYLFHVVNTEEVLKGKKPYIQERGPYVYREYRQKHNITFHENDTVSFLEYRTFV
FQPHMSQGLETDYIVMPNLLVLVSSMMMEHKPMSMKVLMSLSFSMFSQRAFMNRTVGEIM
WGYRDPMIDMLNKYFPGMLPFKDKLGLFSELNNSNSGLFTVFTGVKNFSKIHLVDKWNGK
SKLNFWHSDQCNMINGTSGQIWAPFMTPEYNLQFYSPEACRSMNFEYERSGDFKGIPTFR
FVAPKTLFANGSVYPPNEGFCPCMVSGIQNMSTCQFNAPLFLSHPHFYDADPVLLDSVIG
LHPSKEKHSLFLDVHPVTGIPMNCSVKMQLSLYMKSIPGIGQTGKISPVVLPLLWFEERG
AMEGQTLTTFYNRLVLIPKLMQYLQYILNALGCLFIVITLILIIKNQETFFLFWSSNKKV
SKNSEAIQSYSEFLMTPAPNGTVLQEARL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcaagctcggaggctgcaagaccatcgtggccgtggggctgacgggggtgctc
tgcacggtcctgggcggggtgatgatcttcatggtgccccagctcatcagggaccagatc
ctccagaatgtcaagattgaccccagcaccctgtcctttgagatgtggaaggagatcccc
atccctttctacatgtccgtgtacttattccacgtggtcaacaccgaggaggtgctgaag
gggaagaagccttacattcaggagcgcgggccgtatgtgtacagagaatacaggcagaaa
cacaacatcactttccatgagaatgacacagtgtccttcttagaataccggacctttgtg
ttccagcctcacatgtcccagggcttagaaaccgattacatcgtgatgcccaacctgctg
gtcttggtgtcctccatgatgatggaacacaaacccatgtccatgaaggtgctcatgagc
ttgtccttctccatgttcagccagcgggccttcatgaaccgcacagtgggggaaatcatg
tggggttatcgggatcctatgattgatatgctgaataaatacttccctggcatgttgccg
tttaaggataaacttggcttattttcagagttaaacaactccaattcaggattgttcact
gtgtttacgggggtcaaaaacttcagcaagatccatctggtggacaagtggaatggtaag
agcaagttaaacttctggcattcagaccagtgcaatatgattaatgggacatctggacag
atatgggcccctttcatgactccagaatataaccttcagttctacagcccagaggcttgc
aggtctatgaattttgaatatgaaaggtcaggagatttcaaaggtattcctacttttcga
tttgtggcccctaagacgttatttgccaacgggtctgtctacccaccgaacgaaggcttc
tgtccttgcatggtgtcgggaatccagaatatgagcacttgtcagttcaatgccccgctt
ttcctctcccacccacatttctacgacgccgatccggtgctgcttgactccgtgattggg
ctccatcccagcaaggaaaaacactccctgttccttgatgtgcacccggtcaccgggatc
cccatgaactgttctgtcaaaatgcagctgagcttgtatatgaagtccatccccggcatt
gggcaaacgggaaaaatcagtccagttgtccttcctttgctttggtttgaagagcgtggt
gcgatggaaggccagaccctcaccacattctataacagactggtgttgatacccaagttg
atgcagtacttgcagtacatcttaaatgccctgggctgcctgttcatcgtcattacgctc
atcctcatcatcaagaatcaggaaacattctttttattttggagtagtaataaaaaggtc
tcaaagaattcagaggccattcagtcctattcagaattcctgatgacccctgctcctaat
gggacggtgctacaggaagcccgactatag
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