Sarcophilus harrisii (Tasmanian devil): 100924054
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Entry
100924054 CDS
T02286
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shr03009
]
100924054 (PWP1)
Ribosome biogenesis [BR:
shr03009
]
Eukaryotic type
90S particles
Other 90S particles
100924054 (PWP1)
Pre-60S particles
Other pre-60S particles
100924054 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_SCAP
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
PEP5_VPS11_N
PALB2_WD40
MS_C
Motif
Other DBs
NCBI-GeneID:
100924054
NCBI-ProteinID:
XP_031793955
Ensembl:
ENSSHAG00000016054
LinkDB
All DBs
Position
5:complement(18643293..18657087)
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AA seq
505 aa
AA seq
DB search
MRRSRQVTCAAWVRRGVAKETWNEVELSKDEVKRLIDEAKEKIREIDSDGEDAAEEDPGC
VRIQAPAAEPPSEGVPEGEDGLEDDELAEYELDKYDDEDADTETLQESLMGLTVYGNNDE
DPYVTLKNTEQYEHEDFLIKPSDNLIVCGRAEDDQCNLEVHIYNQEEDSFYVHHDIILSA
YPLSVEWLNFDPNPDEAPGNYVAVGTMSPVIEVWDLDIVDSLEPVFSLGSKDGRKKKKKK
GKKSRTAEEAPEGHTDAVLDLSWNKLIRNVLASASADSSVILWDMSLGKPAANLTLHTDK
VQTLQFHPFEAQTLISGSYDKSVALYDCRSPQESHRLWKFSGQVERVTWNHFSPCHFLAS
TEDGFVYNLDARSNKPIFTLKAHDEEVSGLELSSQIKGCLVTSSSDKYVKIWDVLGDKPS
LVHSRDMKMGVLFCASCCPDLPFMYAFGGQREGLRVWDISTISSVNEVFGHRERLMVTSQ
SQSGVSGSLTLPGRDSGDMDTAMES
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagccggcaggtgacgtgcgcggcgtgggtccgcaggggcgtcgccaaggag
acctggaacgaggtagagctaagcaaggatgaggtcaagcgtctcattgatgaagccaag
gagaaaataagagaaatagacagtgatggagaagacgctgctgaggaggacccgggctgc
gtccgcattcaggcaccggcggcagagcccccatcggagggcgtccctgagggagaggac
ggcctggaggatgacgagctagccgagtacgagctggacaagtacgatgatgaagacgcg
gacaccgagactctccaggagtcactcatggggctcacagtctatgggaataacgacgag
gacccttacgtcaccctcaaaaatacggagcagtacgaacatgaagatttcctgattaaa
cccagtgacaacctcattgtgtgcggccgggctgaagatgaccagtgcaatttggaggtc
cacatttataaccaggaagaagactcgttttatgtgcaccatgacatcatcctgtctgca
taccctctgagtgtggagtggctgaattttgatcccaaccccgatgaagcccctggaaac
tacgtggccgtgggcacgatgtcccctgtgatcgaagtgtgggacctcgatattgtggac
tctttggagccggtattctcacttggaagcaaagatgggaggaagaagaaaaagaagaaa
gggaaaaagagccgaacagccgaggaggccccagaaggacacactgatgctgttctcgat
ctctcgtggaataaactaatcagaaatgtgctggccagcgcatccgccgacagctccgtc
atcctgtgggacatgtctttggggaagcccgcggctaacctgacgttacacacagacaag
gtgcagacgctgcagttccatccgtttgaagcacagaccttgatttctgggtcctatgac
aagtccgtggccttgtacgactgccgcagtccccaggagagtcaccgtctctggaagttt
agcgggcaggtggagagggtcacgtggaatcacttctcgccttgccactttttggctagc
acggaggacggcttcgtgtacaacctggatgcccgctcaaacaagcccatctttacgctc
aaggcccacgatgaggaggtctccggactcgagctgagcagccagattaagggctgcctc
gtgacctcctcctctgacaaatacgtgaagatctgggacgtgttgggagacaagccgagt
ctggtgcactcccgggacatgaaaatgggtgttctcttttgtgcctcttgctgcccggac
ctgcctttcatgtacgcgtttggggggcagagagaggggctccgggtctgggacatcagc
accatctcttcagtgaatgaagtttttgggcatcgagagcggctgatggtcaccagccag
tcccagtcaggggtcagcggctccctcacactcccggggagagacagcggggacatggac
acggccatggaatcttaa
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integrated database retrieval system
