Sarcophilus harrisii (Tasmanian devil): 100924142
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Entry
100924142 CDS
T02286
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100924142 (CASC3)
03015 mRNA surveillance pathway
100924142 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100924142 (CASC3)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100924142 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100924142
NCBI-ProteinID:
XP_031822080
Ensembl:
ENSSHAG00000013338
UniProt:
A0A7N4PDZ3
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All DBs
Position
4:335189050..335202645
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AA seq
699 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSAGSRGGGGGGGGPGGGSSSSLRGGRSGGLNSRRAE
GGGLRSPEESECESEDCIEGDAVLSDYESAEDSEGEEEYSEEESSKVELKSEANDAANSL
VKEDKGEEKPDPKGTVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKG
LFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRS
AHNPDDIKPRRIRKPRFGSSPQREPNWANDRPNKPPRHQGSGGSSLPPRTFINRNAAGTG
RMPTSRNFSRAGGYKEGRTGFRSTENGGPHSIRSNDSAKHENGYRSRRLEYIEDGDLSPE
MESSHVLGSPEKEEAASEPPPPTPETVPPPPDRPVEKKSYSRARRSRNKAGDASKLAEEV
PPPVEGPAPAPPPPATTPPTPSKTGNWEAPVDSSTGELEQDMTQLNLTEQNWSPGQPQFL
QPRELRGIPNHMHLGAGPPPQFNRMEEMSVQGSRAKRYSSQRQRPVPEPPAPPVHISIME
GHYYDPLQFQGPIYTHSDSPTPMPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPV
SMSPGQPPPQQLLAPTYFSAPGVMNFGSPSYPYTPGALPPPPPPHLYPNTQAQSQVYGGV
TYYNPVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRGSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgacgacggcagcgcgcctcgcaggacacggaggatgaggagtccggagcc
tcgggctcagacagcgccggttcccggggcgggggcggcggaggcggcgggcccggcgga
ggctcctcgtcctcgctgcgcggcggcaggtccggaggcctcaactcgcggcgagcggag
ggaggcggtctccggagtcccgaagagtccgagtgtgaaagtgaagactgcatagaaggc
gatgctgttctctcagattatgaaagtgcagaggattcagaaggagaggaagaatacagt
gaagaggaaagttccaaggtggagctgaaatcagaagctaatgatgctgctaattctttg
gtaaaagaagacaaaggagaagaaaagcctgatccaaaaggaactgtgactggcgagaga
caaagtggagatgggcaagaaagcacagaacctgtagaaaacaaggtgggtaaaaaggtc
ccaaagcatttggatgatgatgaagatcggaagaaccctgcctacatccccaggaaaggg
ctcttctttgaacatgacctccgaggccaaacccaagaagaagaagtcagacccaaagga
cgtcagcggaagctgtggaaggatgagggtcgctgggagcatgacaagttcagagaggat
gaacaagcacccaagtctcggcaggagctcattgccctgtatggttatgatattcgatca
gctcacaaccctgatgatatcaaaccccggagaatccgtaaacctaggtttggaagctct
ccacagagagaacctaactgggccaatgaccggccaaacaagcctcctcgtcaccagggc
tctgggggatcctctttgcccccaagaacattcattaatcgtaatgctgctggtacaggc
agaatgcctacatctagaaacttctctcgagcagggggctacaaagaaggaaggaccggg
tttaggtctacagaaaatggagggccacatagtattcgttctaatgactctgccaagcat
gaaaatggttatcgttctcggcgcctggagtacattgaagatggggatctgtcccctgaa
atggagtcttcccatgtgcttggcagccccgaaaaagaggaagcagcttcagagcctcct
ccccctactcctgaaactgtaccaccacccccagacagaccagttgaaaagaagtcctac
tctcgtgcaagaagatccagaaacaaagctggagatgcaagcaagttggcagaggaagtg
ccacctcctgtggaggggccagcccctgcacctccacctcctgcaaccacccccccaaca
ccttcaaagactggaaattgggaagccccagtagattccagcacgggagaacttgagcaa
gatatgacccaactgaatctgacagaacaaaattggagcccagggcagcctcaatttcta
caaccaagggagcttcgaggtattcccaaccacatgcacctgggagcaggccctccacct
cagtttaaccgtatggaagaaatgagtgttcagggtagtcgagccaaacgatattcatcc
cagcgtcagagacctgtccctgaaccaccggccccacctgtacacattagtatcatggaa
gggcactactatgacccattgcagttccagggaccaatctacacccacagtgacagccct
accccgatgcctcctcaaggcatgattgtacaaccagaaatgcacctcccccaccccggt
ttacatccccatcagacgccagcacctctacctaaccccggtctgtaccccccaccagtg
tccatgtccccaggacagccaccaccccagcaactgcttgcccctacctacttctccgct
ccaggtgtcatgaacttcggcagtcccagctatccctataccccaggggcactgccccct
cccccacctcctcacctataccctaacacccaggctcagtctcaggtgtatggaggagta
acctattacaacccagtccagcaacaggtgcagccgaaaccatctccacctaggcggaca
tcccagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggttccagttaa
DBGET
integrated database retrieval system