Sarcophilus harrisii (Tasmanian devil): 100924227
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Entry
100924227 CDS
T02286
Symbol
SRRT
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100924227 (SRRT)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
100924227 (SRRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
100924227
NCBI-ProteinID:
XP_031821206
Ensembl:
ENSSHAG00000007349
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All DBs
Position
4:288188372..288221855
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AA seq
895 aa
AA seq
DB search
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRDRRSRGEYRDYDR
NRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYEMPYAGGGGGPTYGPPQPWGHPDV
HIMQHHVLPIQARPPDRAPPRLGSIAEIDLGVPPPVMKTFKEFLLSLDDSVDETEAVKRY
NDYKLEFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLQVFLSLMDSGW
FDNLLLDIDKADAIVKMLDAAVIKMEGGTEHDLRILDQEEEEEQSGKPGEPGKKEDGRGG
LVLPDGERKTDKDDKEDSKQTENDSLSEDKAKKPDGDGGKDEKKEEPEKEAKKSSKKRNR
KHSGDDSFDEGSVSESESESESVPAEEEKDDAEEAAKEKDKPKEEDREKPKEKPKETLGL
EFKPRPLHKTCSLFMRNIAPNIPRAEIISLCKKYPGFMRVALSEPQPERRFFRRGWVTFD
RSVNIKEICWNLQNIRLRECELSPGVNRDLTRRVRNVNGITQHKQIVRNDIKLAAKLIHT
LDDRTQLWGADSGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGNSGGGPPEEPPK
EGNPAEINVERDEKLLKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPIP
PNRISHGEVVEWQKTFEEKLTPLLSVRESLSEDEAQKMGRKDPEQEVEKFVTSNTQELGK
DKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEVKPAQP
PGPAQIIHVPVRAVLPPGLTGLPYPHQTPQGLMPYGQPRPPILGYGAAAVRPTVPTGGPP
YGGPHAPYGAGRGNYDSFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPEDVDFF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagtgatgatgaatatgaccgtaggcgaagggacaaattccgaagagaacga
agtgattatgatcgttcaagagagagagatgagagacggaggggggatgactggaatgat
cgagagtgggaccgtgggcgagatcggaggagcaggggagagtatcgtgactatgataga
aatcggcgtgaacgcttttctccaccacgccatgagctcagtcctccccaaaaacgaatg
agacgagactgggatgagcacagttctgacccataccacagtggctatgagatgccttat
gccgggggaggtggaggcccaacttacggccctccccagccctggggccatccagatgtc
cacattatgcaacatcatgtactgcccatccaagccagaccccccgaccgggcccccccc
aggctgggcagcatcgcagaaatcgacttgggtgttccaccacctgttatgaagaccttt
aaggagtttctgctgtcactggatgattctgtggatgaaacagaagctgttaaacgatac
aatgattacaagctggagtttcgaaggcagcagatgcaagacttcttcctggctcataaa
gatgaggagtggtttcggtccaaataccaccctgatgaggtggggaagcgtcggcaggaa
gccagaggagccctacagaacagacttcaagtgttcctatctctaatggatagtggctgg
tttgataacctcctcttggacattgacaaggctgatgccatcgttaagatgctggatgca
gctgtgattaagatggaaggaggcacagaacatgatcttcgcattctggaccaggaagaa
gaagaagagcaatcagggaaacctggagaacctggcaagaaagaagatggacggggaggt
ttagtgctccctgatggggaacgaaaaactgataaggatgacaaagaagatagcaaacag
actgagaatgatagtctatctgaagataaggccaaaaaacctgatggtgatggggggaaa
gacgagaagaaagaagagcctgagaaagaagcaaaaaagagcagtaagaagcgaaaccgg
aaacacagtggggatgacagctttgatgaaggcagtgtgtctgagtctgaatctgagtca
gagagtgttccagctgaggaggagaaggatgacgccgaagaagctgctaaggagaaggat
aagcccaaagaggaagatcgggaaaaacctaaagagaagcccaaggaaacacttggactg
gaattcaaaccccgaccactacacaagacttgctctctcttcatgcgcaacattgcaccc
aatatccctcgggctgagattatctctctgtgtaagaaatacccaggcttcatgcgggtg
gctttgtcagagccccagcctgagaggagatttttccgtcggggttgggtgacttttgat
cgaagtgttaacatcaaggaaatttgctggaacctgcaaaatatcaggcttcgggaatgt
gaactgagccctggtgtgaatcgagacttaactcgacgggtccgtaatgtcaatggcatc
actcaacacaaacaaattgtacgcaatgacatcaagctggctgccaagctgattcacact
ctggatgataggacccaactttggggggctgattctgggacccctcccttgcctacgagc
cttccctctcagaatccaattctgaagaatattactgattacctgattgaggaagtgagt
gctgaagaggaagagctgctggggaacagtggagggggaccccctgaagaacctcccaag
gagggaaatccagctgaaattaatgtggaacgagatgaaaagctactcaaggttcttgac
aaactccttctatacttacgcattgtgcactctctggattattacaacacctgtgaatat
cccaatgaagatgaaatgcccaacagatgtggcatcattcatgttcgagggcctataccc
ccaaatcgcatcagccatggtgaagtagtagaatggcagaagacatttgaggaaaagctg
acacccttgttgagtgttcgggagtctttgtcagaggatgaagcccagaagatgggacga
aaagaccctgagcaagaggtggaaaaatttgtcacttccaatacccaggagctgggcaaa
gacaagtggctatgccccctcagtggcaaaaaattcaagggccctgaatttgtacggaag
cacatcttcaacaagcatgctgaaaaaattgaggaagtaaagaaggaggtggcctttttc
aacaacttccttactgatgccaagcggccagcactgcctgaggtcaagccagctcaacca
cctggtcccgctcaaataattcatgttccggtccgtgctgtactccccccaggcctgaca
ggacttccctacccacatcagacgccccagggcctgatgccttatggtcagcctcggcca
cctatccttggctatggagctgcagctgtccgtcccacagtccctacaggaggaccccca
tatggcggcccccatgctccatatggtgctggccgtggcaactatgactcattccggggc
cagggtggttatcctgggaaacctcgaaaccggatggttcgtggtgacccaagggcaatt
gtggaataccgggatctggatgcccctgaagatgttgatttcttctga
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