Sarcophilus harrisii (Tasmanian devil): 100924341
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Entry
100924341 CDS
T02286
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100924341 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
100924341 (APEX1)
Enzymes [BR:
shr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
100924341 (APEX1)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
100924341 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
100924341
NCBI-ProteinID:
XP_003755806
Ensembl:
ENSSHAG00000013524
UniProt:
G3WKB7
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All DBs
Position
2:complement(250162021..250164429)
Genome browser
AA seq
321 aa
AA seq
DB search
MPKRGKKEVSVKDGISDEESEAKAEPQPKKTKKGAKDKEATGEGSARYEDPPDQQTSPSG
KPSTLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSESKLPSELQDLPGLTYQ
YWSSPTDKEGYSGVGLLSRQCPLNVTFGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGR
GLVRLEYRQRWDEAFRKFLKGLNAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQER
QGFGELLQAVPLTDSFRHLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQSLLPALCD
SKIRSKALGSDHCPITLLLAL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgagggaagaaggaagtttctgtgaaggatgggatcagtgatgaggagtca
gaggctaaagcagaaccccagcctaagaaaaccaagaagggtgcaaaagacaaggaggca
acaggggaagggtctgccaggtatgaggatcccccagaccagcagacctcacctagtggc
aaaccttctacactcaagatatgctcttggaatgtggatgggctcagggcctggatcaag
aaaaagggtctggattgggtaaaggaagaagccccagatatcctttgcctccaagaaacc
aaatgttcagagagcaagctgccatccgaacttcaggatctgcctggacttacttaccag
tactggtcctcacccacagataaagaaggatatagtggtgttggtctgctttctcgacag
tgcccactcaacgtcacctttggcattggtgaagaagagcatgatcaggagggccgggtg
atagtggccgagtttgaggcgtttgtgctggtgacagcatatgtgcctaatgcaggacgg
gggctggttcgactagaataccgacaaagatgggatgaagcgtttcgaaagtttttgaag
gggctaaatgccaaaaagccacttgtgctctgtggggacctcaatgtggcccatgaagag
attgacttgcgtaatcctaaggggaacaagaaaaatgctggttttaccccacaggaacgc
caaggttttggggaactgctccaagcagtgccactgactgacagcttccgtcatctctat
ccagaggcagcttatgcttataccttctggacttacatgatgaatgcccgagccaagaat
gttggctggcggcttgactatttcttgttgtcccaatccttgctccctgccttatgtgac
agtaagatccggtccaaagccctgggtagtgaccattgtcctatcaccctcttactggcc
ttgtaa
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