Sarcophilus harrisii (Tasmanian devil): 100924346
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Entry
100924346 CDS
T02286
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
shr04217
Necroptosis
shr04613
Neutrophil extracellular trap formation
shr05034
Alcoholism
shr05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100924346
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100924346
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100924346
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
100924346
09165 Substance dependence
05034 Alcoholism
100924346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100924346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100924346
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
100924346
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100924346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
100924346
NCBI-ProteinID:
XP_012405105
Ensembl:
ENSSHAG00000009340
LinkDB
All DBs
Position
2:345370063..345466785
Genome browser
AA seq
410 aa
AA seq
DB search
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVSKKSGGKKGPRKSKKKQGEVSKAASADSTTEGTPA
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLEVIQSFCMVMN
GEPRPRFASFSSIMALLQFSGHFKPVLWNTLEKKGGKEFVEAVLELRKKNGPLDIAGAAV
SAGHGLPAKFVIHCNSPIWGSDKCEELLEKTVKNCLALADDKKLKSIAFPSIGSGRNGFP
KQTAAQLILRAISSYFVSTMSSSIKTVYFVLFDSESIGIYVQEMAKLDAN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagccgaggtggaaagaagaagtccaccaaaacctcccgatcagcaaaagctgga
gtcatcttccctgtggggcgaatgttgcgatacattaagaaaggacaccctaagtacagg
attggggtgggtgctccagtgtacatggctgctgtgctggaatacctgactgcagaaatt
ttggaattggctgggaatgctgcaagagacaacaagaagggaagagtcactcctcgacat
atccttttggctgtagccaatgatgaagaattaaaccagctgttaaagggggtcaccatc
gccagtgggggtgttttaccaaatatccacccagaattgctagcaaagaagaggggatcc
aaaggcaaactggaagccatcattactcccccaccagccaaaaaggccaaatctccatca
cagaagaaacctgtgtcaaagaaatcaggaggcaagaaaggacccaggaaatctaagaag
aagcagggagaagtcagcaaagcagccagtgcagatagtaccacggagggcactcctgct
gatggattcaccgtcctctccaccaaaagcctcttcctcggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccattatcaatcctaccaat
gctgacattgaccttaaagatgacctagaagtgatacaatcattctgcatggtaatgaat
ggagaaccaaggccaaggtttgcatctttcagctccataatggccttgcttcaattctct
ggtcatttcaagcctgtactatggaataccctggagaagaaaggtggcaaggaatttgtg
gaagcagtgttagagcttcggaaaaaaaatggtccattggacattgctggagcggctgtc
agtgctggccatggtttgcctgccaagtttgtgatccattgtaacagtccaatatggggt
tctgacaagtgcgaagagcttctggaaaagactgtgaagaattgtttggctttagcagat
gacaagaagctgaaatcaattgcatttccatcaattggcagtggccgaaatggtttcccc
aaacagacagcagcacagctgatcctgagagccatctccagttactttgtgtctacaatg
tcttcatcaatcaaaacggtttatttcgtgctcttcgacagtgagagtatagggatatat
gtgcaggaaatggcaaaattagatgctaactga
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integrated database retrieval system
