Sarcophilus harrisii (Tasmanian devil): 100924580
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Entry
100924580 CDS
T02286
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04110
Cell cycle
shr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100924580 (SMC1B)
04114 Oocyte meiosis
100924580 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100924580 (SMC1B)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100924580 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100924580 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100924580
NCBI-ProteinID:
XP_031794434
Ensembl:
ENSSHAG00000007070
LinkDB
All DBs
Position
5:1719913..1764656
Genome browser
AA seq
1179 aa
AA seq
DB search
MGRLDRLLVENFKSGRHQVPRPFTTSTIVGPNGSGKSNVMDALSFVMGEKPNNLRVKTVQ
ELIHGAHVGRPVAASASVKAVYVEEDGGEKTFTRIIRGAWGPPPPSLLLSYSTFPGDLGT
SSFPLKPKPMRAGSQEGLNQCNVNNADRYQVLLEELKEKKIQLQLFQLYHNEKKIHFLTG
ELDEMNRQLALTKDSVSADENIVKNKKKDLGKLTRELQQMEKEMKALEAVLNQKRPQYIK
AKENTSHHLKKLEMAKKSIKVSEKQCTKQEDDIQALEKELQELDGSWKNFEKQIEEEKLR
RGRDIELEASQLDQYKELKEQVIKKVATMTQQLEKLQWEQRADEERQAFGDRRRTEVQGN
LKQIKEQIEDHNKRIEKLEEYTNACIDCLKEKTQQEEALVKEIEESKVRMVKVNEELSFI
RMELQDARIDHHEGKRQQKKVEILECLKRLYPESVFGRLLDLCHPIHKKYQLAVTKLFGR
YLTAIVVVSEKIARDCIRFLKEERAEAETFLALDNLDIKPLNERLREIKGSKMVIDVVQT
QLPQLKKVIQFVCGNGLVCETVEEARHVAFGGSERLKTVALDGTLFLKSGVISGGSSDLK
IKAKCWDDKELTKMKERRDQLTSELKDMMKIRHKETDLRQIQSLLQGTHTRLKYSQNELE
MIKKKQLAAFHKEQSQLQSELLNIESQYTMLSDGIKERAQKITDFQERIDKVEDEIFHDF
CEEIGVENIREYENQHVKQQQEIDKKRLEFEKLKTRLNVQLEYSHNQLKKKMSKVSALKE
AVLKDTSDIESLKEVEESCLQVVDDLMAQRQQLKDRCAAKNTDIEQVQGQVEEARKKLLA
INREVGKMQKETVAVQTALEQQRLERHNILLACKVQDIEVVLLSGSLDDIIHVAVGTEPE
STQSTIAIYEQEGTLQIDYSSLRGDLKDLESDKEIKAQLGLLQQQLATQEDILLKTTAPN
LRAQQNLQTVRNKFQESIDAFEASRKEARVCRQEFEQVKKRRYDLFSQCFEHVSLSVDYI
YKKLCRNSGAQAFLSPENPEEPYLEGVSYNCVAPGKRFMPMENLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIDKVSSYMREQTREHFQMIVISLKEEFYSKADALVGIY
PEQGDCMFSRVLTLDLSVYPDSNNREHRGRRRDGRSLLT
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctagacaggctgctggtggagaacttcaagtctggccgccaccaagtccct
cggcccttcacaacttccaccatcgtgggtcccaacggctccggcaagtcaaacgtgatg
gacgcgctgagtttcgtcatgggagaaaagcccaacaacctgcgcgtgaagaccgtccag
gagctcatccacggcgcccatgtgggcaggcccgtggcggccagcgccagcgtgaaggct
gtgtatgtggaggaggacggcggggagaaaacctttacccgcattatccggggtgcgtgg
ggtcccccccctccatccctcctcctgtcctatagtacctttcctggtgatttgggaact
agctctttccccttaaagcctaagcccatgagggctggttcccaggaagggcttaatcag
tgcaatgtgaataatgccgaccgctaccaggtcctcctcgaggaactgaaagagaagaag
atacagctgcagctttttcagctttaccacaatgagaaaaaaattcattttctgaccggt
gaactagatgaaatgaacaggcaattggctctcacaaaagactccgtctctgctgatgaa
aacattgtgaaaaacaagaagaaggaccttggaaagttaaccagagaacttcagcaaatg
gaaaaggagatgaaggctctggaggcagtgttgaatcagaagaggccccagtacatcaag
gccaaggagaatacttcacatcatctcaagaagctggagatggccaagaagtccatcaag
gtcagtgagaagcagtgcaccaagcaagaagatgatatccaagccctggaaaaagagctg
caagaattagacgggagctggaagaattttgagaagcagattgaagaagagaagctgcgt
cgtggtagggacatcgagctggaagccagtcagctggatcagtacaaggaacttaaggaa
caagtgatcaagaaggtggcgactatgacgcagcagctggaaaagctgcagtgggagcag
agggcagatgaggagagacaggcctttggggacaggcggcgaacagaagttcagggaaat
ttaaagcaaataaaggaacaaatagaagaccataataaacgcatagagaaattggaggaa
tatacaaatgcatgcatcgattgtttgaaagagaaaacccaacaagaagaagccctcgtt
aaggaaattgaggagtccaaagtcagaatggtcaaagtgaatgaagaattgagtttcatc
agaatggagttacaggatgcacgcattgatcatcatgaaggaaagcgccagcaaaagaaa
gtagagattctggagtgcttgaaaaggctttatcccgagtctgtgtttggcagactcctt
gatttatgtcatcccattcataagaagtaccaacttgctgtgaccaaactctttggcaga
tacttaacagctattgtggtagtttctgaaaaaatagcaagagattgcattcgattcctg
aaagaagaaagagctgaagctgagacgttccttgctctggataaccttgatatcaagcct
ctcaatgaaaggctcagggagataaaaggctccaagatggtgatagatgttgtgcagacc
cagcttccgcagctcaagaaggtcatccagtttgtgtgtggcaacgggcttgtgtgtgag
actgtggaagaagctcggcatgtggcctttggtgggtccgagcggctgaagacagtagct
ctggatggaacattgtttttgaaatcgggagtcatttctggaggatcgagtgacttaaaa
atcaaagccaaatgctgggatgacaaggaactaaccaaaatgaaggaaagaagagaccag
ctcaccagtgagctaaaggacatgatgaaaatacgccataaagaaacggatttgaggcaa
atacagtcattgttacaaggaactcatacccgactcaaatattctcagaacgaactagag
atgattaaaaagaagcagctggccgcttttcacaaggaacagtcccagctgcagagcgaa
ttactgaatattgaatcgcagtacaccatgctgagtgatggcatcaaggaaagagcacaa
aaaatcactgacttccaagaaaggatagataaggtggaagatgaaattttccatgatttc
tgtgaagaaattggtgttgaaaacatacgtgaatatgaaaaccagcatgtgaaacagcag
caggaaattgacaagaagaggcttgagtttgagaaactgaaaactcgactgaacgttcag
cttgaatatagccacaaccaactgaagaagaagatgagtaaggtttctgccctgaaagag
gccgtcctcaaagacacaagcgacatcgagagtctgaaggaggtggaagaaagctgcctg
caagttgtggatgatctcatggctcagcggcagcagctgaaggacaggtgtgccgcgaag
aatacggacattgaacaggtgcagggccaggtggaggaagcgcgcaagaagcttttggcc
atcaatagggaggtggggaagatgcagaaggagacggtcgccgtccagacggctctggag
cagcagcggctcgagaggcacaacatcctgctcgcctgcaaggtgcaggacattgaggtc
gtcctcctgtcaggctccctggacgacatcatccatgtggcggtgggtacagaacctgag
agcacacagagcaccatcgccatctatgagcaggaaggaaccctgcagatagactacagc
agcctccgaggcgacctgaaggatctggagtctgacaaggagataaaggctcagctgggg
ctcctgcagcagcagctggcgacccaggaagacatcttactgaagaccacggcccccaac
ctgcgagcccaacagaacctgcagactgtccgcaacaagttccaggagtccatcgatgct
tttgaggccagcaggaaggaagccagagtctgcaggcaagagtttgagcaggtgaagaag
aggagatacgacctcttcagccagtgctttgagcacgtctcactgtccgtggattatatc
tacaaaaagctctgcagaaacagcggtgcccaggcgttcctcagccccgagaacccagaa
gagccttacctggaaggggtcagctacaactgcgtggctccgggcaagcgcttcatgccc
atggaaaacctgtccgggggggagaagtgcgtggcggcgctggccctgctgtttgccgtg
cacagcttccgtcctgcgccattctttgtcctcgacgaagtggatgcggccttggataac
acaaacatcgacaaagtgtcgagctacatgagggagcagacgcgggagcacttccagatg
atcgtcatttctctcaaggaggagttctactccaaagctgacgcgctggtgggcatctac
cccgagcaaggggactgcatgttcagcagagtcctgaccctggacctgtccgtgtacccg
gacagcaacaacagggagcaccgaggcaggcgccgcgatggccgctccctgctcacctga
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