Sarcophilus harrisii (Tasmanian devil): 100924644
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Entry
100924644 CDS
T02286
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100924644 (ZC3H12C)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
100924644 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
100924644
NCBI-ProteinID:
XP_031817265
Ensembl:
ENSSHAG00000005597
LinkDB
All DBs
Position
3:485812018..485964968
Genome browser
AA seq
1274 aa
AA seq
DB search
MAWDAVDDFGIFEIRPSSNYSTIPASGLSDCRNKLFPSTYFSGESLHRLGLITNLPPGMR
PVAYPQPCLALLLRWFYRVVIIAGATSSWSHRNGRRIARRRLWKESPFLAAQGGADRCLG
KQASWSWRKLPRINKSPRRDIPVGARISLGRTERDRGGAGRPGVKLRGSSPGIYARAERS
RLSGPPSPALHASQVFPLGSGFPVSVLGTLQQQVLSWAAAAAAGEDEEKRRRRLSGGRAA
ASLRGEGAAAAPNERSRRDAGPACRQVGLRPCVFVRARGPGPGWAGPLLGRPGRAGGRAG
STPEPGPGPEPKRERARGLPGEGSGCRAGPGRAAGHSRPRHRPFPGPGGSGPPEVELGRS
RDGRPRPRGGAESPAARVRRPPPPPPRAAETPSKEYRAGYFQEHRKNSKVESSTCSSFMG
LKDHLGHDLGHLYVESTDTHISAIVPWSMVEKPTMDKVNSRKEDPEKVISESTGSSSCDS
EESTNSDNDSEHLGGVAVEPCLLTKTHRQLRRSPCLESHIFKCNEILQDLKTEETQTTPK
EVKKPPDVVKEYQAKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSETDS
TVSTINSSIIRETSSLESQRSDSPLQEIVTDDGENLRPIVIDGSNVAMSHGNKEVFSCRG
IKLAVDWFLERGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGR
RVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDD
PLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGSQPQRSVADELRA
MSRSTAAKTANEGGLVKSNSVPCSTKTDSTSDVKRAAPKRQSDPSIRTQVYQDLEEKLPT
KNKLETRSVPSLVSIPSSSAAKPQSTTPLSNGLPSGVHFPPQDQRPQGQYPPMMMATKNH
GTPMPYEQYPKCDSPVDIGYYSMLNAYSNLSVSGPRSPERRFSLDTDYRISSVASDCSSE
GSMSCGSSDSYVGYNDRSYVSSPDPQLEENLKCQHMHAHSRLNSQPFLQSFHDPLTRVQS
YSHEEPKHHHKPPVPYMAVHLQHPAVGARSSCPGDYPSPQNSAHSKTLHLGRSLVSTRID
SISDSRLYDNSPSRQRKPYSRQEGLGSWERQNYGLDAYGYRQTYSLPDNATQPCYEPFTF
QSLPEQQDPAWRVPFCGLPQDASRYQDSREKVYINLCNIFPSDLVRVVMKRNPHMTDAQQ
LAAAILVEKSQLGY
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggatgcagtggatgactttggcatctttgagatcagaccaagctctaattac
tctacaattcctgcttcaggcctttctgattgtaggaataaattattcccatctacctat
ttttctggggaaagtcttcacaggcttgggttaatcaccaatttaccaccaggtatgagg
cctgttgcttatcctcaaccatgtttagcccttttgctgagatggttttaccgggttgta
atcattgcaggagctacatcttcttggagccacagaaatgggcggaggatcgcgcgaagg
cggctttggaaggagtctccttttctggccgctcagggaggagccgatcggtgcctgggg
aagcaggcgagctggagctggaggaagcttccccggataaataagagccctcggcgggac
atcccggttggagcccgcatctccctgggaaggaccgagcgagaccgggggggggcgggg
cgcccgggcgtgaagctccgcgggtcgtcccccgggatctatgcccgggccgagcggagc
aggttaagcggcccccccagtcccgctctccacgcctcccaggttttcccccttggctcg
gggtttcctgtttcagttctcggtactctccagcagcaggtgctgagctgggcggcggcg
gcggcggccggggaggatgaggagaagaggcgccgccgactgagcggaggccgagccgcg
gcgagcctgcggggcgagggcgcagcggccgcgccgaacgagcggagccggcgggacgcg
ggaccggcttgcaggcaggttggcctcagaccctgtgtgtttgtgcgcgcgagggggccg
gggccgggctgggcggggccgctccttgggaggccggggcgggcgggcgggcgtgccggg
agcacgccggagccggggccgggcccggagccgaagcgggagcgcgcccgggggctcccg
ggagaaggaagcggctgccgggccgggccgggccgggccgccggccacagccgccctcgc
caccgcccttttccaggccccggagggtctgggcccccggaggtcgagttagggagatcc
cgagacgggaggccgaggccccggggcggagcagaaagcccggctgcccgggtccgccgg
cccccacccccacccccacgggctgcggagaccccgagcaaggaatacagggcaggttat
ttccaggaacacagaaaaaacagcaaagtggagtcaagtacatgcagcagcttcatgggc
ttgaaggatcacttggggcatgacctaggccacctttatgtggaaagcactgacacacac
ataagtgctattgtaccttggtcgatggtggagaaaccaacaatggataaagttaactca
aggaaggaagatccagaaaaggtgatctctgaatctactggaagctctagttgtgactcg
gaagaaagcacaaattctgataatgattcagaacacttgggtggcgttgcagtagagcca
tgcttattaaccaagactcatagacagctacgtagatccccctgtttagagtctcacata
ttcaaatgcaatgaaatcttgcaagacctaaagactgaggagacacagacaacacctaag
gaagtgaagaagccccctgatgtggtgaaagaataccaggccaaactggagtttgcactt
aagttaggttattctgaagaacaagttcaacttgttctaaataaacttggtactgatgct
ttaatcaatgatatcttaggagaacttgtcaaacttggaaataaaagtgaaactgattca
actgttagtacaattaacagtagcataattagagaaacatcttccctagaatctcagagg
tctgactccccacttcaggagattgtgacagacgatggtgagaatctgagaccaatagtt
attgatggcagcaatgtggcaatgagccatgggaacaaagaagtattttcctgtcgtgga
ataaaattggcagttgattggtttttggaaagaggccacaaagatattacagtgtttgtt
cctgcctggagaaaagaacagtcaagacctgatgctctcatcacagatcaagaaattttg
cgtaagttggagaaggagaaaattctggtgttcactccatcccgacgtgttcagggaaga
agagtagtatgttatgatgacagattcattgtaaaattggcttttgagtctgatggtatc
attgtgtccaatgataactacagggatctggctaatgaaaagccagaatggaagaagttt
atagatgaacgattgttgatgtattcctttgtgaatgacaagtttatgcctcctgatgat
cctcttggcaggcatggtccaagcttggacaactttctaaggaaaaagcctattgttcca
gaacataagaaacagccatgtccctatggaaagaaatgtacctatggacacaagtgcaaa
tactatcatcctgagaggggaagtcagccacagagatcagtagctgatgaacttcgcgct
atgtctagaagtacagcagccaaaactgcaaatgaaggaggtttagtgaaaagcaacagt
gttccttgtagcactaaaactgacagtacttctgatgtcaaacgtgctgctccaaagagg
caatcagatcctagcataagaactcaagtctatcaagacttagaggaaaagcttcccacc
aaaaacaaattggaaaccaggtctgttccctccttagttagtataccatcttcctctgct
gcaaaaccccaaagtaccacacctttaagcaatggccttccatctggagttcatttccca
cctcaggatcaaagaccccagggtcagtatcctccaatgatgatggcaaccaaaaatcat
ggaacgccaatgccttatgaacagtatccaaaatgtgattcacctgttgacattggatat
tattccatgttgaatgcatattcaaatctcagtgtctctggccccaggagtcctgaaagg
cgtttctcattagatacggattacagaattagttctgtagcctctgactgcagtagtgaa
gggagcatgagttgtgggagcagtgactcctatgtgggttacaatgacaggtcatatgtt
agttctcctgacccacagctggaggaaaatttaaagtgtcaacatatgcacgcacacagc
cgccttaattcccagcccttcctacaaagtttccatgatcccttaaccagagtgcaaagt
tacagtcacgaagaaccaaagcatcatcataaacctccagttccatacatggctgtgcat
ttgcagcatccagctgtgggggctcggtccagttgccccggcgattatccttctcctcag
aattcagcacactctaagaccctacatctagggagatctttagtgtccaccaggatagac
agcatttcagattctaggctctatgacaattctccttctagacaaagaaaaccttattct
cgccaagagggtcttggaagctgggagagacagaattatggccttgatgcgtatggctat
cgtcagacttactcactgcctgataacgccacccagccatgttatgagccattcactttc
cagagcttacccgagcagcaggacccggcgtggcgggtccccttctgcggcctgccacaa
gatgcttcaaggtaccaggacagccgagaaaaggtgtacatcaacctctgcaacattttc
ccatctgaccttgtgagagttgtcatgaaaagaaacccccacatgactgatgctcagcaa
cttgctgcagctattttagtggagaaatcacaactgggttattga
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