Sarcophilus harrisii (Tasmanian devil): 100924779
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Entry
100924779 CDS
T02286
Symbol
CHRNA5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100924779 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100924779 (CHRNA5)
Ion channels [BR:
shr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100924779 (CHRNA5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100924779
NCBI-ProteinID:
XP_031812646
Ensembl:
ENSSHAG00000017368
LinkDB
All DBs
Position
2:629556974..629586150
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AA seq
479 aa
AA seq
DB search
MAAAGRSLSVLPAAFAPSIRGPCGPLLLLQLLLLARAGAPVSAAWTGISEPSFEAKCEDR
LFKNLFRDYERWVRPVKHPNDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWVDVKLK
WNPDDYAGIKAIRVPSDSIWTPDIVLFDNADGRFEGTSTKTVVRYDGTVAWTPPANYKSS
CTIDVTFFPFDLQNCSMKFGSWTYDGSQVDLVLDDYDVDKRDFFDNGEWEIVSATGSKGN
RTDGCCWYPYVTYYFVIKRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVL
VSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAININHRSSSTHNPMA
PWVRKIFLHQLPKLLCMRSHVDRYFAHKEETGKINGSRSPRNTLEAALDSIRYITRHVMK
ENDVREVVEDWKFIAQVLDRMFLWTFLLVSIIGSLGLFVPVIYKWANIPLPNHIGNTNK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggggcgatccctctcggtcctccccgctgcgttcgcccccagcatccgc
ggcccttgtggccccctcctcctcctccagctgctgctgctggctcgggccggcgccccg
gtcagcgctgcgtggactgggatatcggaaccatcctttgaggcgaaatgtgaagatcgt
ttgtttaagaacttgtttcgagattacgaaagatgggttcgtccggtgaaacacccgaat
gacaaaataaaaataaagttcggtcttgcaatctctcagttagtagatgtggacgagaag
aatcagttaatgaccacaaatgtgtggttgaaacaggaatgggttgatgtaaaattaaaa
tggaatcctgatgactacgccggaatcaaagctatccgcgtgccctccgactccatctgg
actccagacatagtattgtttgacaatgcagatggacgctttgaagggaccagcacaaaa
acagtcgtaagatatgatggcactgtggcctggaccccaccagccaactacaaaagctcc
tgtaccatagatgtcacctttttcccatttgatctccaaaactgttctatgaaatttggt
tcctggacatacgatggatctcaggtggatttagtgttggacgattatgacgtagataaa
agagattttttcgataatggagaatgggaaatagtgagtgccactggaagcaaagggaac
agaacagatgggtgttgctggtatccctatgtgacttactattttgtaattaagcgtttg
cctctcttttacacccttttccttatcatcccctgcattggactctcgtttttaactgtg
ctcgtcttctatcttccttcaaatgagggtgaaaagatttgtctgtgcacttcagtgctt
gtgtctttgacagttttcctcctagttattgaagagatcatcccatcatcttccaaagtc
atccctctaattggagagtacctagtgtttactatgatttttgtgacattgtcaatcatg
gtgactgtctttgcaatcaacattaaccatcgttcctcctccacacataatcccatggca
ccttgggttcgaaaaatctttcttcatcagcttcccaaactcctttgtatgagaagccat
gtagaccggtactttgcccacaaggaggaaactggcaagatcaatggttccagatctcct
cggaacactttggaggctgctcttgattccatccgctatatcacaaggcacgtcatgaag
gagaatgacgttcgtgaggttgttgaagactggaaattcatagcccaagtacttgaccgg
atgtttttgtggacttttctcctggtttcaataattggatcacttgggctttttgttcct
gttatttacaaatgggccaatatccccttaccgaatcatattgggaatacaaataagtga
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integrated database retrieval system
