Sarcophilus harrisii (Tasmanian devil): 100924877
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Entry
100924877 CDS
T02286
Symbol
CDH5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecules
shr04520
Adherens junction
shr04670
Leukocyte transendothelial migration
shr05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100924877 (CDH5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100924877 (CDH5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100924877 (CDH5)
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
100924877 (CDH5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100924877 (CDH5)
04090 CD molecules [BR:
shr04090
]
100924877 (CDH5)
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Major cadherins
100924877 (CDH5)
CD molecules [BR:
shr04090
]
Proteins
100924877 (CDH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
100924877
NCBI-ProteinID:
XP_031806192
UniProt:
A0A7N4P1R7
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Position
2:complement(58875644..58921672)
Genome browser
AA seq
791 aa
AA seq
DB search
MEKQILILFLAAACKSVIRACAEAENFPLELPLSGAQDVRPRFKRDWIWNQMHIQEEMTG
QLPHLVGKITSSVNRKNARYVLKGPEAGEGKLFQVHAQNGDVYAFERLDREKKSEYYLTA
YIVDKDTNENLEPPSNFTIKVHDVNDNAPEFAQRVFNGSVPEMSAVGTSVTRVTAVDADD
PTVLGHASVSYNIIRGREYFTIDGSGTIFTAVNNLDREKQSKYEIVVEAKDGPGLRGESS
TATVVITLSDINDNFPVFTETNYKFVVPEDIRVGSSLGSLTVEDPDEPQNRMTKYSIVQG
EYRDTFVIELDASRNQGIIKPMKALDYEHIKEYSFTIEATDPTISLHYLNHGLSKNLAVV
HINVTDVDEPPVFSQRFYHFKLMENQKKPLIGSVLARDPDAAQRNIEYSIRKTSDKGQFF
RISKQGYISNVKELDREIYPWYNLTVEAKEMDTRGNYPTGQESIVQVHVEILDENDNAPE
IAQPNDARVCENAAPGTLVTRILATDKDITPRDVKFKYSLSREDSNFTLTENRDNSANIT
VKYGQFDRERAKVHYLPVVISDNGKPSLTGTTTLVITVCKCNDHGEPTFCEEPAKQVGVS
IQALVAIFLCILTIVVITILIVLRRRLRKQDRAQGKNVAEIHEQLVTYDEEGGGEMDTNS
YDVSVLNSACKGSGKPPGGKPPRPALDARPSLYAQIQKPPRPAQPQAVTGEMAVMIEVKK
EEADHDGGGPPYDTLHIYGYEGAESIAESLSSLVTDSSDSDVDYDFLNDWGPRFKMLAEL
YGTEPNQELVY
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacagatcctcatccttttcctggctgcagcctgcaaaagtgtgataagagcc
tgtgcagaggcagaaaacttccccctagagcttcccctgtcaggggcccaggatgttcgc
ccacggtttaagagagattggatttggaaccaaatgcacatccaggaagagatgactggc
caactccctcatcttgtgggcaagatcacatcaagtgtgaacaggaaaaatgccaggtat
gttctcaaagggcctgaagccggtgaagggaaactctttcaagtccatgcacagaatgga
gatgtgtatgcttttgagaggctggatcgggaaaagaaatcggagtattacctcactgca
tacattgtggacaaagataccaacgagaatctggagccgccctccaacttcacaatcaaa
gttcatgacgtgaatgataacgctcctgaatttgcacagagagttttcaacggctcagtg
ccagaaatgtcagctgttggaacttcagtcaccagagtcacagcagtggatgcagatgac
cccaccgtgttgggccatgcctcggtttcctacaatataattcgtggcagagagtatttc
accatcgatggttctggtaccatcttcacagctgtgaataacctggatcgagaaaagcag
tcaaagtatgagatagtggtagaagccaaggatggaccagggctccgtggggagtccagc
acagccacagtagtcatcactctgagtgacatcaatgacaactttccagtcttcactgaa
acaaattataaatttgtggttcctgaagatatccgagttggaagctccctgggatccctg
acagtcgaagaccctgatgagccccagaaccggatgaccaagtacagcattgtccaggga
gaatacagggacacctttgtcattgagctcgatgcttccaggaaccaaggcatcatcaag
cccatgaaggccctggattatgagcacatcaaagaatatagcttcaccatcgaggcaaca
gacccaacaattagccttcactacctgaaccacggtctctcaaagaacctggctgttgtt
catatcaatgtcactgatgtagatgagccaccagtcttctctcaacgtttctatcacttc
aaactgatggaaaatcaaaagaaacccttaattggctcagtgttagccagggaccctgat
gcagctcaacggaacattgagtactccatccggaagaccagcgataaaggacaatttttc
agaatctccaagcagggttacatttccaatgttaaggaattggaccgtgaaatctaccct
tggtataatttgactgttgaggccaaagagatggatactcgtgggaactaccccactggc
caagaatccattgttcaagttcatgtggaaatcctagatgagaatgacaatgccccagag
attgcacaacctaatgatgccagagtgtgtgaaaatgctgcccctggaacattggtcaca
aggatcttggctacagacaaggatataactccacgggatgtaaagtttaaatactccctg
agtagagaggacagcaatttcaccctgacagaaaatcgagacaattcagccaacatcacg
gtgaaatatggtcaatttgatcgtgagagagccaaggttcactatcttcctgtagtaatt
tctgacaatgggaaacccagtcttacaggtaccaccacccttgtcatcacagtctgcaaa
tgcaatgaccatggggaacccacattctgtgaagaaccagccaaacaggttggagtgagc
atccaggcccttgtagccatctttctgtgcatcctcaccattgttgtgatcacgatacta
attgtcctccgccggcggttgaggaaacaggacagagcccaaggcaagaacgtagcagaa
attcatgagcagctggtcacctatgatgaggaaggtggtggggagatggataccaacagc
tatgatgtatctgtgctcaactcagcctgcaagggcagtgggaagcctccgggagggaag
ccacccaggcctgccctagatgcacggccttccctctatgctcagatccagaaacctccc
agacctgctcagccccaggctgtaactggggagatggccgttatgatcgaggtgaagaag
gaagaggcggatcatgatggtggtgggcccccctacgacacactccacatctatggctat
gaaggagccgagtccattgctgagtcactcagcagcctcgtcacagattcctcagattca
gatgttgactatgacttcttgaatgactgggggcccaggttcaaaatgttagctgagctt
tatggcactgaacctaaccaggagttagtatattaa
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