Sarcophilus harrisii (Tasmanian devil): 100924972
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Entry
100924972 CDS
T02286
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
100924972 (LRRTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_EndoS
LRR_NXF1-5
LRR_12
UL97
LRRNT
HemY_N
Motif
Other DBs
NCBI-GeneID:
100924972
NCBI-ProteinID:
XP_012395985
Ensembl:
ENSSHAG00000013943
UniProt:
G3WLT0
LinkDB
All DBs
Position
2:complement(24532300..24535648)
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AA seq
525 aa
AA seq
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MDFLLLGLCLNWLLRKPPGWIVCVLGVGFQMLPAAQSGCPQLCRCEGRLLYCESLNLTEA
PHNLSGMMGLSLRYNSLSELRDGQFTGLMQLTWLYLDHNHICSVEGDAFQKLRRVKELTL
SSNQISQLANTTFRPMPNLRSVDLSYNNLQALAPDLFHGLRKLTTLHMRANAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLVSLHSLCL
RRNKVAIVVNSLDWVWRLEKLDLSGNEIEYMEPHAFEAVPHLESLQLDSNRLTYIDPRIL
NSWKSLSSITLSGNVWDCGRNVCALASWLSSFKGRYDGNLLCASPEHAQGEDVLDAVYAF
HLCEDSADPTSGHLLSAVTNHSEDGAARVGPATTAPAGGVRDLEGARTTDGVEGVTEPVE
HAENAVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTM
HQMAAMSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgcttctcgggctctgtctaaactggctgctgaggaaacccccggggtgg
atcgtgtgtgtgctgggtgtcggctttcagatgctcccggcggcgcagagcgggtgcccg
cagctgtgtcggtgcgaggggcggctgttgtactgtgagtcactgaacctcacggaggcg
cctcacaacctgtctggcatgatgggcttgtctctgcggtacaacagcctctcggagctg
cgtgatggacagttcacggggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcggtggagggggacgcctttcagaagctgcggcgggtgaaggagctcaccctg
agctccaaccagatcagccagctggccaacaccacgttccggcccatgcccaacctgcgc
agcgtggacctgtcctacaacaacctgcaggcgctggcgcccgacctcttccacgggctg
cggaagctcaccacgctgcacatgcgggccaacgccatcaagttcgtgcccgtgcgcatc
ttccaggactgccgcagcctcaagttcctggacatcggctacaaccaactcaagagcctg
gcgcgcaactccttcgccggcctcttcaagctcaccgagctgcacctggagcacaacgac
ctggtgaaggtgaacctggcgcacttcccgcgcctcgtgtccctgcactcgctgtgcctg
cgccgcaacaaggtggccatcgtcgtcaactccctggactgggtgtggaggctggagaag
ctggacctgtccggcaatgagatcgagtacatggagccgcacgccttcgaggccgtgccg
cacctcgagtccctgcagctcgactccaaccgcctcacctacatcgacccccgcatcctc
aactcctggaagtcgctgtccagcatcacgctgtcggggaacgtgtgggactgcgggcgc
aacgtgtgcgccctggcctcctggctcagcagcttcaaggggcgctacgacggcaactta
ctctgcgccagcccggagcacgcccagggcgaggacgtcctggacgccgtgtacgccttt
cacctctgcgaggactcggccgaccccaccagcggccacctgctgtcggccgtcaccaac
cacagcgaggacggggccgcccgcgtcggccccgccaccaccgcgcccgccggcggggtg
cgggatctcgagggtgcccggacgacggacggcgtcgagggggtcaccgaacccgtggag
cacgccgagaacgccgtgcagatccacaaggtggtcacgggcaccatggccctcatcttc
tccttcctcatcgtggtgctggttttgtacgtgtcctggaagtgtttcccggccagcctc
aggcagctgcgacagtgttttgtgacacagcgcagaaagcagaagcagaaacagactatg
catcagatggctgccatgtcagcccaggagtactatgtggactacaagcccaaccacatc
gagggcgcgctggtgatcattaacgagtacggctcctgttcctgtcaccagcaaccggcc
cgggaatgtgaggtgtga
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