Sarcophilus harrisii (Tasmanian devil): 100925109
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Entry
100925109 CDS
T02286
Symbol
ARHGEF5
Name
(RefSeq) rho guanine nucleotide exchange factor 5 isoform X1
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100925109 (ARHGEF5)
Membrane trafficking [BR:
shr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100925109 (ARHGEF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
ARHGEF5_35
SH3_2
SH3_1
SH3_9
PH
SOS1_NGEF_PH
MBG_3
Motif
Other DBs
NCBI-GeneID:
100925109
NCBI-ProteinID:
XP_012406550
Ensembl:
ENSSHAG00000012553
LinkDB
All DBs
Position
5:193171607..193200426
Genome browser
AA seq
1637 aa
AA seq
DB search
MRSLPLWEGRGRLGGWGGWGLSRGRPAGAGTPVEIFLPRQPGPCDTDQESALMEDEGPPR
RVSTPTPALEELHIFPTSLMKNIPDSEPEEAETEDSAWQWTEDDDVFEIQKRDQSNQSTT
EEIPPILSQEDFPALETDNGDIIAARSRIQRPSRLVSQGLQEGHTPLISTESSVCPTVAA
SLDIGPNPNEIRSKIVVGSCPKFPNPLTEKERSEASETVEKGIFLPSSIEDRPHSPLEEP
NSLICDAERRAAQQEGEPQERKEKGGQEGLLHQKQEEAQDPGKQGKQEERELEDQGKLEC
FDGFSEQQELEMATCIQRQREEQGQEGKGQVDLVLRGEKEGETFNREVEDQNHRERYPGD
KNVENQDHGKVEGQKNQGSELVNEQRKVDHYNNNQEKQGEIAQESKEKQDDVKEPWKLEE
RAEEEQETVARETLEAEGVVRRNKNEEIQKHYVPFPLTQIVPSTNISWGSFPRDPVSTRS
ETQEEMKTESSRVQLSMSSSCPDSAPRPGQGSSGSLQSIPPPSLSREDSEKEAEQNGWEE
EYSVVDRTMPSLGKKPTPPRPIAIAHKTETSMPFSSIKMDPNTSSDSCPPTFSLTRESSP
LSSLPVLSRSFSFDKEFSIHHWDHTPSLEEAPWVPSAKSERASALTHPESSQETIQYHGS
NSAPSSYGTGQPQYLAQNPTSFHHSELAHRLSEPAIHSAEILRREEQARPEPSSDPSSLN
QLQEFTQNLQTPGATQSPTRCPSKKESFLSEGLIHGSPLSSSMVEMGLHELVPPLPARER
HSHPPLVVRHSSHLAKPPAPKRYSHPPIFPLAPVLPGSPEGPSIPAKTRQNRPLPSTPVP
DSSHYTQRYNKPLPPTPVMTPPYHPLTSTRKNKPLPPLPILETDTKPPPLPPKAKWRSSS
SHGSIMDAGDQLRSKPSSSKVPEGNWEVLSSLSAGRTSWPPDMDTPIDFLTSSDRNKSEM
TSLAFSNMTNFLLGSPSSPTPSMTQDPQHSVLGGIQEEHGQSEGTLRTLSRGAFQGNSNG
PRRSDRGLVRQSGKPSHPPLEKSSSWPHRKDPGKFLEMSGGHSESTTEGQNKTKGWNRQG
LRRPSIFPGDVLDGEGPPMEKPPCPSDTIVFREKKPREVMGGVTRRCSKFINSSHLLYQE
YSDVALNKEIQSQQRLDSLTEGSSPASPRQPRKSVNTDSYLQRLSIASSASLWQDIPRVR
NSTILLSMTHENQKLQEAKFELIMSEASYLRSLHVAVDHFQLSLPLRNTMSNQDHHWLFS
RLQDVRDVSTMFLSDLEENFEHDIFTFHVCDVVLTHAPAFRRVYLPYVTNQTYQERTFQR
LLSSNSNFREVLDKLESDPICQRLSLKSFLILPFQRITRLKLLLQSILKRTQPGSPEEAE
ATKAHHAVEELIRDCNNNVQRMRRTEELIYLSQKIEFECKIFPLISQSRWLVKSGELTVL
ESTVSPGLRRKLATRPVHLHLFNDCLLLSRPREGNRFLVFDHAPFSSVRGEKCEMKLHGP
HKNFFRLFLRHNTQGTQAEFLFCTETQSEKLRWISALAPPREELDLLECHDSPQVQCLRS
YKPRENDELALEKADVVMVTQQSSDGWLEGMRLSDGERGWFPLSHVEFITNPDVRKRNLS
EAHRVKTAKLQLVGRQR
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgagatccctcccgctttgggaggggaggggcaggctaggcgggtggggcggctggggc
ctgagtcggggacggccggcaggagctgggaccccagtggagatctttctacccagacag
cccggaccatgtgacactgaccaggaatcagccctgatggaggatgaagggcctcctcgt
agagtttctactccaactcctgctctggaggaactccatatctttccaacatcccttatg
aagaatattcctgattcagaacctgaagaagcagagacagaagactctgcctggcaatgg
actgaggatgatgatgtctttgagattcaaaagagagatcagagtaatcagagcacaact
gaagagataccacctattctttcccaggaagattttccagctttggagactgacaatgga
gatattatagctgcaaggtcaagaatccagagaccttcaaggctagtgtcccaaggcctc
caagagggacatacccctttgatttccactgagagctctgtctgccccactgtggctgct
agcctggacattggccccaaccccaatgaaataaggagcaagattgtagtaggatcttgt
ccaaaattccctaaccctctgacagaaaaagaaagatcagaagccagtgaaacagtggag
aaaggaatctttcttccctcctccattgaggataggccccattctcctcttgaagaaccc
aacagtctgatctgtgatgcagaaagaagagctgcccagcaggagggggagcctcaagag
aggaaggaaaaaggagggcaagaagggctgttacatcagaaacaagaggaagcccaggat
ccagggaaacaagggaagcaggaagagagggaactggaagatcaggggaagctggagtgt
tttgatggattttcagaacagcaggaactggaaatggcaacatgtattcaaagacaaaga
gaagaacaaggacaagaaggtaaaggacaggttgatttagttctgaggggagaaaaagaa
ggagagacatttaatagggaggtagaagatcaaaatcatagggaaagatacccaggagac
aagaatgtggaaaatcaggatcatgggaaagtagaagggcagaaaaatcaaggaagtgaa
ctggtgaatgaacaaagaaaagtagatcattataataacaaccaagagaaacagggagag
atagcacaggagagtaaggaaaaacaggatgatgtaaaagagccatggaagctagaggag
agagctgaggaagaacaggagactgtcgctagagaaacattggaagctgagggagtggtg
aggagaaacaagaatgaagaaattcagaagcattatgttcccttcccattgacccaaatt
gtcccaagcaccaatatttcatggggttctttcccaagagatcctgtttctacaagatct
gagactcaggaagagatgaaaactgagtcttctagagttcaactctccatgtcctcttcc
tgcccagactctgctccaaggcctggacagggatcatcaggatctctccagtccatccct
cctccaagtctttccagagaggattctgagaaagaagcagagcaaaatggctgggaggaa
gagtacagtgtagtagacagaaccatgcctagcttggggaagaaaccaacacctccaagg
ccaattgccatagctcataaaacagagacctcaatgcctttcagttccattaagatggat
cccaacacctcatcagattcctgcccccctaccttctctcttacaagagagtcttcaccc
ctgtcctctctaccagtactctccagatccttttcctttgataaagaattctctattcac
cactgggaccacacaccttctcttgaagaggctccttgggtaccatccgccaaatctgag
agagccagtgccctaacccacccagaatcctctcaggaaactatccaataccatgggagt
aactctgctccaagctcctatgggacagggcagcctcagtatctggcccagaatccaacc
tctttccatcattcagaactggctcacagactctctgaacctgccatccacagtgctgag
atcttaagaagggaggagcaggctaggccagaaccctcctctgatccttcctccttgaat
caacttcaagaatttacccaaaatttacaaacgcctggtgctacccaaagcccaactcgg
tgtccatcaaaaaaggaatccttcctctcagagggacttatccatggctcgcctctttcc
tcatccatggtggaaatgggattacatgaactggtgccccctctcccagcacgggagcga
cacagtcatcctcctctggtagtgcgacatagcagccatcttgccaagccccctgcccca
aaacggtatagccaccctcccatctttcccttagctccagtgctacctggctcccctgaa
ggtccttctatccctgctaagacaagacagaaccgacctctaccttctactccagtccca
gacagttcccactacactcagagatacaataagccattgccccctaccccagttatgacc
cctccttatcaccctctcacatctactagaaaaaacaaacctcttcctccccttcccatt
ttggagactgacaccaagccacctccactgcccccaaaggctaagtggagaagcagcagt
tctcatgggtcaattatggatgcaggagatcaattgaggtcaaaacctagctcctcaaag
gtacctgaagggaactgggaagttctttcttctctctctgctggacgtacctcctggcct
ccagatatggacacaccaatagacttcttgacctcttctgacaggaataaaagtgagatg
acttctctggctttcagtaacatgactaactttcttctggggagtccttcttccccaacc
ccttccatgacccaggacccacagcattctgtcctgggaggaatccaggaggaacatgga
caatcagaagggactttaaggactttgagcagaggagcttttcaggggaatagcaatggg
ccccggaggtcagatcgaggcctggtgcgacagtcagggaaacccagccatccacctttg
gagaaatcatccagctggccacacaggaaagatcctgggaaatttttggaaatgagtggc
gggcactcagagagtactactgaagggcagaacaagaccaagggatggaaccggcaaggc
ttgcgcagaccatctatcttccctggggatgtcctagatggggaaggcccccccatggaa
aaacctccttgtccctcagatacaattgtttttcgagagaagaaaccaagggaagtgatg
ggtggtgttaccaggcgctgttccaagttcatcaattcctcccatttgctttaccaggaa
tatagtgatgtggctctaaacaaggagatacaaagccaacagagactagacagcctcacc
gaaggatccagcccagcttcaccccgacagccccgaaaatcagtaaacacagactcttat
cttcagcgcctctctattgcttccagtgcctctttatggcaggacatcccccgagtacgc
aatagcaccatacttctctctatgactcatgagaaccaaaagctgcaggaggccaaattt
gaacttatcatgtcagaagcttcctatctgcgaagtcttcatgtggctgtagaccatttc
cagctctcattaccactccggaatacaatgtctaaccaggaccaccattggctcttctct
cgtctacaagatgtgcgggatgtcagcaccatgtttctttcggacctggaagagaacttc
gagcatgacatctttaccttccatgtttgtgatgtggtcctgacccatgcacctgccttc
cggcgtgtctacctaccttatgtcaccaaccagacttaccaggagcgcacttttcaacgc
cttctgagcagcaacagtaatttccgggaagtcctggataagctagaaagtgaccctatc
tgccagcgcctttccctaaagtcctttctcatactgcctttccagcgtatcacccgcctc
aaactgctgctccagagtattcttaagaggacacagcctggctccccagaagaagcagag
gccacaaaagcacaccatgccgtggaagagctcatccgagactgcaataacaatgtccag
aggatgcgacggacagaagaactgatttacctaagtcagaagattgagtttgagtgcaaa
attttcccattgatctcacagtcacgatggttggtgaagagtggggagctaacagtcctt
gagtccactgtgtcacctggactacggaggaaactggccactcgacctgtccacttgcat
ctcttcaatgactgcctgttgttatcacggcctagagagggcaaccgcttcctggtattt
gaccatgcccctttttcatctgtacgtggagagaagtgtgaaatgaagctgcatggacca
cacaagaacttcttccgtctctttctccggcacaacacacagggcacccaggctgaattc
ctcttttgcacagagactcagagtgaaaagcttcgctggatctcagctttagctcctcca
agagaggaattggacctcttggaatgtcatgactccccacaggttcagtgtctacgttct
tataaacctcgagagaatgatgagttggccctggagaaagcagatgtggtcatggtgact
cagcagagcagcgatggttggctggagggtatgaggctgtcagatggggagaggggctgg
ttccctttgtcacatgtggagttcatcaccaaccctgatgttcgaaagcggaacctgtca
gaggcacatagagtcaagactgccaaactacaattagtcggacgccaaagataa
DBGET
integrated database retrieval system
